Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27901 Sequoiadendron giganteum HOM05D004306 ORTHO05D005055 2.5e-83 312.0 150 100.0
SalBow5G1134 Salvia bowleyana HOM05D004306 ORTHO05D005055 1.5e-67 259.6 147 81.0
SalBow5G1710 Salvia bowleyana HOM05D004306 ORTHO05D005055 1.9e-67 259.2 147 81.0
CARHR245950 Cardamine hirsuta HOM05D004306 ORTHO05D005055 7.3e-67 257.3 147 81.0
CsaV3_6G043980 Cucumis sativus L. HOM05D004306 ORTHO05D005055 9.5e-67 256.9 147 80.3
ECA238G2426 Erigeron canadensis HOM05D004306 ORTHO05D005055 1.2e-66 256.5 146 80.1
EL10Ac6g15639 Beta vulgaris HOM05D004306 ORTHO05D005055 1.6e-66 256.1 147 81.6
Lsat_1_v5_gn_2_82860 Lactuca sativa HOM05D004306 ORTHO05D005055 2.1e-66 255.8 146 80.8
MSTRG.15357 Avicennia marina HOM05D004306 ORTHO05D005055 3.6e-66 255.0 146 81.5
AUR62003989 Chenopodium quinoa HOM05D004306 ORTHO05D005055 6.2e-66 254.2 147 80.3
Gohir.A11G216400 Gossypium hirsutum HOM05D004306 ORTHO05D005055 6.2e-66 254.2 147 81.0
Gohir.D11G207000 Gossypium hirsutum HOM05D004306 ORTHO05D005055 6.2e-66 254.2 147 81.0
Gorai.007G222100 Gossypium raimondii HOM05D004306 ORTHO05D005055 6.2e-66 254.2 147 81.0
Lj4A160T62 Lonicera japonica HOM05D004306 ORTHO05D005055 6.2e-66 254.2 147 79.6
Manes.12G110500 Manihot esculenta HOM05D004306 ORTHO05D005055 6.2e-66 254.2 147 80.3
Sopen02g037110 Solanum pennellii HOM05D004306 ORTHO05D005055 8.1e-66 253.8 146 80.8
Duzib187G0102 Durio zibethinus HOM05D004306 ORTHO05D005055 1.1e-65 253.4 149 78.5
HanXRQChr14g0449471 Helianthus annuus HOM05D004306 ORTHO05D005055 1.1e-65 253.4 145 80.7
AUR62040257 Chenopodium quinoa HOM05D004306 ORTHO05D005055 1.4e-65 253.1 147 79.6
ClCG01G017440 Citrullus lanatus HOM05D004306 ORTHO05D005055 1.4e-65 253.1 147 78.9
Sp7g35240 Schrenkiella parvula HOM05D004306 ORTHO05D005055 1.4e-65 253.1 147 80.3
COL.COLO4_11552 Corchorus olitorius HOM05D004306 ORTHO05D005055 1.8e-65 252.7 147 80.3
Nitab4.5_0006069g0040 Nicotiana tabacum HOM05D004306 ORTHO05D005055 1.8e-65 252.7 146 79.5
Peaxi162Scf00264g00117 Petunia axillaris HOM05D004306 ORTHO05D005055 1.8e-65 252.7 146 79.5
Solyc02g092530.4 Solanum lycopersicum HOM05D004306 ORTHO05D005055 1.8e-65 252.7 146 80.1
AL7G13210 Arabidopsis lyrata HOM05D004306 ORTHO05D005055 2.3e-65 252.3 147 80.3
Dinv26913 Davidia involucrata HOM05D004306 ORTHO05D005055 2.3e-65 252.3 147 79.6
Duzib264G0002 Durio zibethinus HOM05D004306 ORTHO05D005055 2.3e-65 252.3 149 78.5
Nitab4.5_0000651g0100 Nicotiana tabacum HOM05D004306 ORTHO05D005055 2.3e-65 252.3 147 78.9
TPR.G23896 Trifolium pratense HOM05D004306 ORTHO05D005055 2.3e-65 252.3 147 78.9
GSVIVG01000135001 Vitis vinifera HOM05D004306 ORTHO05D005055 2.3e-65 252.3 149 81.2
THA.LOC104819873 Tarenaya hassleriana HOM05D004306 ORTHO05D005055 3.1e-65 251.9 147 80.3
CARHR245960 Cardamine hirsuta HOM05D004306 ORTHO05D005055 4.0e-65 251.5 147 79.6
DCAR_025786 Daucus carota HOM05D004306 ORTHO05D005055 4.0e-65 251.5 146 79.5
Medtr4g095660 Medicago truncatula HOM05D004306 ORTHO05D005055 4.0e-65 251.5 145 80.7
Nn1g04599 Nelumbo nucifera HOM05D004306 ORTHO05D005055 4.0e-65 251.5 147 79.6
PGSC0003DMG400024965 Solanum tuberosum HOM05D004306 ORTHO05D005055 4.0e-65 251.5 147 78.9
GSVIVG01000140001 Vitis vinifera HOM05D004306 ORTHO05D005055 4.0e-65 251.5 147 81.6
Atru.chr3.158 Acer truncatum HOM05D004306 ORTHO05D005055 5.2e-65 251.1 146 80.1
Atru.chr3.187 Acer truncatum HOM05D004306 ORTHO05D005055 5.2e-65 251.1 146 80.1
AT4G37550 Arabidopsis thaliana HOM05D004306 ORTHO05D005055 5.2e-65 251.1 147 79.6
CAN.G1075.22 Capsicum annuum HOM05D004306 ORTHO05D005055 5.2e-65 251.1 146 79.5
Cfa004112 Carpinus fangiana HOM05D004306 ORTHO05D005055 5.2e-65 251.1 147 78.2
Haze_15301 Corylus avellana HOM05D004306 ORTHO05D005055 5.2e-65 251.1 147 78.2
Eucgr.H02295 Eucalyptus grandis HOM05D004306 ORTHO05D005055 5.2e-65 251.1 145 82.1
MD15G1294800 Malus domestica HOM05D004306 ORTHO05D005055 5.2e-65 251.1 147 78.2
Phvul.003G236000 Phaseolus vulgaris HOM05D004306 ORTHO05D005055 5.2e-65 251.1 147 80.3
Prupe.6G223000 Prunus persica HOM05D004306 ORTHO05D005055 6.8e-65 250.8 147 78.2
Sp7g35230 Schrenkiella parvula HOM05D004306 ORTHO05D005055 6.8e-65 250.8 146 80.1
Thecc.01G070200 Theobroma cacao HOM05D004306 ORTHO05D005055 6.8e-65 250.8 149 77.9
DCAR_000330 Daucus carota HOM05D004306 ORTHO05D005055 8.9e-65 250.4 146 78.8
RcHm_v2.0_Chr2g0107581 Rosa chinensis HOM05D004306 ORTHO05D005055 8.9e-65 250.4 147 77.6
Sed0025668 Sechium edule HOM05D004306 ORTHO05D005055 8.9e-65 250.4 147 78.9
Migut.L00204 Erythranthe guttata HOM05D004306 ORTHO05D005055 1.2e-64 250.0 148 79.7
PGR102G2907 Punica granatum HOM05D004306 ORTHO05D005055 1.2e-64 250.0 147 80.3
Aqoxy6G02701 Aquilegia oxysepala HOM05D004306 ORTHO05D005055 1.5e-64 249.6 146 78.8
AT4G37560 Arabidopsis thaliana HOM05D004306 ORTHO05D005055 1.5e-64 249.6 145 80.7
CSS0001342 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 1.5e-64 249.6 146 78.8
MBI16_g09132_MAGBIO Magnolia biondii HOM05D004306 ORTHO05D005055 1.5e-64 249.6 145 80.7
PSO541G4466 Papaver somniferum HOM05D004306 ORTHO05D005055 1.5e-64 249.6 146 77.4
SEGI_23023 Sequoiadendron giganteum HOM05D004306 ORTHO05D005055 1.5e-64 249.6 150 77.3
TAR628G0028 Trochodendron aralioides HOM05D004306 ORTHO05D005055 1.5e-64 249.6 145 80.0
Carub.0007s0271 Capsella rubella HOM05D004306 ORTHO05D005055 2.0e-64 249.2 147 78.2
Ca_13922_v3 Cicer arietinum L. HOM05D004306 ORTHO05D005055 2.0e-64 249.2 147 78.2
Glyma.17G161900 Glycine max HOM05D004306 ORTHO05D005055 2.0e-64 249.2 147 78.2
Lalb_Chr16g0389191 Lupinus albus HOM05D004306 ORTHO05D005055 2.0e-64 249.2 145 80.7
Rhsim10G0101200 Rhododendron simsii HOM05D004306 ORTHO05D005055 2.0e-64 249.2 146 79.5
unitig_748.g8394 Utricularia gibba HOM05D004306 ORTHO05D005055 2.0e-64 249.2 147 76.9
VMungo0251G0785 Vigna mungo HOM05D004306 ORTHO05D005055 2.0e-64 249.2 147 78.9
Thhalv10025180m.g Eutrema salsugineum HOM05D004306 ORTHO05D005055 2.6e-64 248.8 147 78.2
GSVIVG01000137001 Vitis vinifera HOM05D004306 ORTHO05D005055 2.6e-64 248.8 147 80.3
BcaNung05904 Brassica carinata HOM05D004306 ORTHO05D005055 3.4e-64 248.4 147 77.6
C01p01580 Brassica napus HOM05D004306 ORTHO05D005055 3.4e-64 248.4 147 77.6
BolC1t00153H Brassica oleracea HOM05D004306 ORTHO05D005055 3.4e-64 248.4 147 77.6
Potri.005G145400 Populus trichocarpa HOM05D004306 ORTHO05D005055 3.4e-64 248.4 147 79.6
FvH4_1g17390 Fragaria vesca HOM05D004306 ORTHO05D005055 4.4e-64 248.1 147 76.9
FAN19G2263 Fragaria x ananassa HOM05D004306 ORTHO05D005055 4.4e-64 248.1 147 76.9
FAN23G0931 Fragaria x ananassa HOM05D004306 ORTHO05D005055 4.4e-64 248.1 147 76.9
FAN26G3311 Fragaria x ananassa HOM05D004306 ORTHO05D005055 4.4e-64 248.1 147 76.9
CiPaw.02G003700 Carya illinoinensis HOM05D004306 ORTHO05D005055 5.8e-64 247.7 147 77.6
SGA_v2.0_scaffold21G09395 Striga asiatica HOM05D004306 ORTHO05D005055 5.8e-64 247.7 147 78.2
Actinidia11991 Actinidia chinensis HOM05D004306 ORTHO05D005055 7.5e-64 247.3 146 78.1
CANSAT01G0675 Cannabis sativa HOM05D004306 ORTHO05D005055 7.5e-64 247.3 145 78.6
Ciclev10025794m.g Citrus clementina HOM05D004306 ORTHO05D005055 7.5e-64 247.3 146 78.8
Oeu014230.2 Olea europaea HOM05D004306 ORTHO05D005055 7.5e-64 247.3 147 76.9
Psat0ss839g0200 Pisum sativum HOM05D004306 ORTHO05D005055 7.5e-64 247.3 145 78.6
A01p01400 Brassica napus HOM05D004306 ORTHO05D005055 9.9e-64 246.9 147 78.2
FAN28G1176 Fragaria x ananassa HOM05D004306 ORTHO05D005055 1.3e-63 246.5 147 76.2
TWI09G0703 Tripterygium wilfordii HOM05D004306 ORTHO05D005055 1.3e-63 246.5 147 76.9
vmacro05397 Vaccinium macrocarpon HOM05D004306 ORTHO05D005055 1.3e-63 246.5 145 78.6
BraA01t00136Z Brassica rapa HOM05D004306 ORTHO05D005055 1.7e-63 246.1 147 77.6
Lj4g0006645 Lotus japonicus HOM05D004306 ORTHO05D005055 1.7e-63 246.1 147 77.6
Sc16g0000120 Simmondsia chinensis HOM05D004306 ORTHO05D005055 1.7e-63 246.1 147 78.2
AL7G13200 Arabidopsis lyrata HOM05D004306 ORTHO05D005055 2.9e-63 245.4 147 77.6
Cpa.g.sc6.39 Carica papaya HOM05D004306 ORTHO05D005055 2.9e-63 245.4 145 78.6
Hma1.2p1_0730F.1_g209845 Hydrangea macrophylla HOM05D004306 ORTHO05D005055 2.9e-63 245.4 145 77.9
BcaNung05905 Brassica carinata HOM05D004306 ORTHO05D005055 4.9e-63 244.6 147 76.9
C01p01570 Brassica napus HOM05D004306 ORTHO05D005055 4.9e-63 244.6 147 76.9
BolC1t00152H Brassica oleracea HOM05D004306 ORTHO05D005055 4.9e-63 244.6 147 76.9
Pp3c3_32950 Physcomitrium patens HOM05D004306 ORTHO05D005055 4.9e-63 244.6 145 77.2
Thhalv10025178m.g Eutrema salsugineum HOM05D004306 ORTHO05D005055 6.4e-63 244.2 146 78.8
Cc07_g06920 Coffea canephora HOM05D004306 ORTHO05D005055 8.3e-63 243.8 146 76.0
CSS0041574 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 1.1e-62 243.4 146 76.0
Oeu040626.2 Olea europaea HOM05D004306 ORTHO05D005055 1.4e-62 243.0 147 75.5
BcaNung05906 Brassica carinata HOM05D004306 ORTHO05D005055 2.4e-62 242.3 147 76.9
A01p01390 Brassica napus HOM05D004306 ORTHO05D005055 2.4e-62 242.3 147 75.5
BraA01t00135Z Brassica rapa HOM05D004306 ORTHO05D005055 2.4e-62 242.3 147 75.5
Aa31LG6G14430 Aethionema arabicum HOM05D004306 ORTHO05D005055 7.1e-62 240.7 145 77.2
CSS0047878 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 7.1e-62 240.7 146 75.3
arahy.Tifrunner.gnm1.ann1.HR4B5C Arachis hypogaea HOM05D004306 ORTHO05D005055 9.2e-62 240.4 145 77.2
arahy.Tifrunner.gnm1.ann1.GV60EB Arachis hypogaea HOM05D004306 ORTHO05D005055 1.2e-61 240.0 145 77.2
Cre16.g691750 Chlamydomonas reinhardtii HOM05D004306 ORTHO05D005055 1.2e-61 240.0 146 74.7
Lj4g0023143 Lotus japonicus HOM05D004306 ORTHO05D005055 1.2e-61 240.0 146 76.7
CDE04G2054 Ceratophyllum demersum HOM05D004306 ORTHO05D005055 3.5e-61 238.4 153 74.5
Hund13938 Selenicereus undatus HOM05D004306 ORTHO05D005055 3.9e-60 235.0 173 67.1
Sc16g0000140 Simmondsia chinensis HOM05D004306 ORTHO05D005055 2.5e-59 232.3 147 73.5
Os01g0764900 Oryza sativa ssp. japonica HOM05D004306 ORTHO05D005055 3.6e-58 228.4 147 70.7
SMO141G0231 Selaginella moellendorffii HOM05D004306 ORTHO05D005055 6.2e-58 227.6 144 71.5
Zm00001eb370290 Zea mays HOM05D004306 ORTHO05D005055 3.1e-57 225.3 145 71.0
Sabra05G0116200 Salix brachista HOM05D004306 ORTHO05D005055 2.6e-56 222.2 201 58.2
MD00G1015600 Malus domestica HOM05D004306 ORTHO05D005055 1.4e-54 216.5 194 55.7
MELO3C007621.2 Cucumis melo HOM05D004306 ORTHO05D005055 5.6e-51 204.5 110 86.4
CSS0039286 Camellia sinensis var. sinensis HOM05D004306 ORTHO05D005055 4.4e-48 194.9 146 65.1
Oeu013288.2 Olea europaea HOM05D004306 ORTHO05D005055 1.9e-43 179.5 145 60.7
Ah.02g125510 Amaranthus hybridus HOM05D004306 ORTHO05D005055 4.8e-42 174.9 147 59.2
TPR.G23871 Trifolium pratense HOM05D004306 ORTHO05D005055 6.4e-39 164.5 109 69.7
Cfa004110 Carpinus fangiana HOM05D004306 ORTHO05D005055 2.4e-38 162.5 147 55.8
HPP92_014148 Vanilla planifolia HOM05D004306 ORTHO05D005055 1.3e-36 156.8 83 85.5
ATR0019G017 Amborella trichopoda HOM05D004306 ORTHO05D005055 2.2e-31 139.4 74 86.5
SMO170G0023 Selaginella moellendorffii HOM05D004306 ORTHO05D005055 2.0e-24 116.3 70 74.3
ATR0515G001 Amborella trichopoda HOM05D004306 ORTHO05D005055 1.9e-22 109.8 55 89.1
COL.COLO4_11551 Corchorus olitorius HOM05D004306 ORTHO05D005055 4.2e-14 82.0 44 81.8
HPP92_014166 Vanilla planifolia HOM05D004306 ORTHO05D005055 3.6e-13 79.0 115 43.5


User provided reference genes

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