Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.4e-241 838.6 478 100.0
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 5.5e-177 624.8 387 93.8
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 4.6e-115 419.1 478 58.2
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 2.3e-114 416.8 497 56.1
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 4.8e-112 409.1 476 54.6
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 1.3e-109 401.0 493 52.1
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 8.4e-109 398.3 496 54.6
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 2.5e-108 396.7 484 53.1
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.3e-106 391.0 490 53.7
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 3.0e-106 389.8 503 51.3
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 1.5e-105 387.5 498 53.0
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 4.3e-105 386.0 491 52.7
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 5.7e-105 385.6 488 53.7
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 4.8e-104 382.5 499 53.1
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 4.8e-104 382.5 482 53.5
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 1.1e-103 381.3 475 49.9
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 4.1e-103 379.4 502 52.2
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 9.0e-103 378.3 484 51.4
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 1.2e-102 377.9 502 51.6
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.5e-102 377.5 481 53.8
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.6e-102 376.7 488 49.6
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 3.4e-102 376.3 487 53.0
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 5.9e-102 375.6 486 54.1
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 1.0e-101 374.8 496 53.8
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 6.5e-101 372.1 497 54.7
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 4.2e-100 369.4 492 53.0
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 5.5e-100 369.0 487 52.4
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 7.2e-100 368.6 501 49.7
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 1.2e-99 367.9 493 52.1
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 3.6e-99 366.3 528 50.4
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.6e-99 366.3 500 52.2
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 6.1e-99 365.5 481 52.6
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 1.8e-98 364.0 493 52.3
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.1e-97 361.3 494 52.8
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 4.3e-97 359.4 490 52.4
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 9.7e-97 358.2 496 52.4
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 9.7e-97 358.2 488 51.8
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 2.2e-96 357.1 480 48.5
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 8.2e-96 355.1 476 47.3
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.4e-95 354.4 482 48.5
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 6.9e-95 352.1 498 51.4
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 1.2e-94 351.3 493 49.7
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 2.0e-94 350.5 493 52.3
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.0e-93 348.2 508 48.0
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.0e-93 348.2 482 49.2
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.3e-93 347.8 495 51.1
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 3.8e-93 346.3 503 49.1
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 6.5e-93 345.5 492 48.6
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 8.5e-93 345.1 496 49.6
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 1.4e-92 344.4 501 48.3
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 1.4e-92 344.4 493 48.7
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 1.9e-92 344.0 503 49.7
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 2.5e-92 343.6 475 47.2
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 2.5e-92 343.6 491 52.3
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 2.5e-92 343.6 501 50.9
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 3.2e-92 343.2 495 46.1
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 3.2e-92 343.2 493 50.7
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 7.2e-92 342.0 476 50.2
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 1.2e-91 341.3 488 51.2
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 1.2e-91 341.3 493 48.9
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 2.1e-91 340.5 486 48.1
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 6.1e-91 339.0 478 49.4
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 6.1e-91 339.0 498 51.4
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 7.9e-91 338.6 493 48.3
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 1.4e-90 337.8 476 48.3
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 2.6e-89 333.6 487 47.2
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 3.3e-89 333.2 493 45.4
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 4.3e-89 332.8 511 46.2
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 9.7e-89 331.6 488 48.2
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 1.3e-88 331.3 510 45.9
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 2.2e-88 330.5 495 47.3
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 3.7e-88 329.7 493 45.6
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 6.3e-88 328.9 478 45.8
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 8.2e-88 328.6 491 51.1
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 1.4e-87 327.8 476 48.5
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 1.4e-87 327.8 495 47.5
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 1.4e-87 327.8 493 49.5
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 1.8e-87 327.4 474 47.0
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 3.1e-87 326.6 545 46.8
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 2.0e-86 323.9 497 48.9
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 2.6e-86 323.6 491 48.9
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 3.8e-85 319.7 481 46.4
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 5.0e-85 319.3 475 45.9
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 5.0e-85 319.3 485 45.4
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 9.4e-84 315.1 485 48.7
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 6.1e-83 312.4 485 45.8
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 2.3e-82 310.5 501 47.3
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 2.0e-81 307.4 480 47.9
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.2e-80 303.9 493 43.6
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 2.2e-80 303.9 488 47.1
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 3.7e-80 303.1 492 43.3
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 4.8e-80 302.8 495 46.3
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 4.8e-80 302.8 493 45.4
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 8.2e-80 302.0 488 44.9
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.4e-79 301.2 487 46.0
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 2.0e-78 297.4 495 44.0
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.6e-78 297.0 410 54.4
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 1.1e-76 291.6 523 40.5
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.5e-76 291.2 518 42.9
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 9.4e-76 288.5 486 45.7
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 3.0e-66 256.9 538 43.3
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 6.3e-64 249.2 491 40.1
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 1.1e-63 248.4 410 49.0
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 1.2e-59 235.0 479 38.0
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 8.3e-56 222.2 181 60.2
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.8e-55 221.1 318 52.5
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.3e-53 214.2 346 45.1
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 6.2e-43 179.5 132 67.4
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 1.1e-39 168.7 195 53.8
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 2.6e-33 147.5 480 27.5
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 5.8e-33 146.4 335 43.0
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 6.2e-27 126.3 99 59.6
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.0e-26 123.6 109 57.8
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 3.8e-24 117.1 114 52.6
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 8.4e-24 115.9 110 54.5
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 2.1e-22 111.3 476 24.4
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 1.7e-21 108.2 580 29.7
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.5e-20 105.1 146 50.0
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 2.5e-20 104.4 251 40.2
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 2.6e-17 94.4 127 47.2
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 4.4e-17 93.6 341 28.7
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 4.0e-10 70.5 80 56.2
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 4.5e-09 67.0 187 34.8
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.2e-08 64.7 88 51.1
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 2.4e-07 61.2 475 23.6


User provided reference genes

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