Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27821 Sequoiadendron giganteum HOM05D003429 ORTHO05D003873 1.3e-42 176.0 91 100.0
QL04p022427 Quercus lobata HOM05D003429 ORTHO05D003873 1.6e-37 159.1 89 87.6
Manes.04G153600 Manihot esculenta HOM05D003429 ORTHO05D003873 4.8e-37 157.5 89 88.8
CsaV3_6G035760 Cucumis sativus L. HOM05D003429 ORTHO05D003873 8.1e-37 156.8 89 87.6
Duzib114G0344 Durio zibethinus HOM05D003429 ORTHO05D003873 8.1e-37 156.8 89 86.5
Thecc.10G129100 Theobroma cacao HOM05D003429 ORTHO05D003873 8.1e-37 156.8 89 86.5
Gohir.D10G200200 Gossypium hirsutum HOM05D003429 ORTHO05D003873 1.1e-36 156.4 89 86.5
Gorai.011G224400 Gossypium raimondii HOM05D003429 ORTHO05D003873 1.1e-36 156.4 89 86.5
GSVIVG01012453001 Vitis vinifera HOM05D003429 ORTHO05D003873 1.1e-36 156.4 89 87.6
Potri.001G036100 Populus trichocarpa HOM05D003429 ORTHO05D003873 1.4e-36 156.0 89 86.5
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 1.8e-36 155.6 89 84.3
Ca_15294_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 85.4
FvH4_7g04530 Fragaria vesca HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
FAN03G0932 Fragaria x ananassa HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
FAN06G0150 Fragaria x ananassa HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
FAN06G3547 Fragaria x ananassa HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
FAN10G0722 Fragaria x ananassa HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
MBI19_g25231_MAGBIO Magnolia biondii HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
MD02G1207800 Malus domestica HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 85.4
MD07G1118000 Malus domestica HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 85.4
Potri.003G189500 Populus trichocarpa HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
RcHm_v2.0_Chr1g0329811 Rosa chinensis HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 86.5
TPR.G38508 Trifolium pratense HOM05D003429 ORTHO05D003873 2.4e-36 155.2 89 85.4
Dinv03754 Davidia involucrata HOM05D003429 ORTHO05D003873 3.1e-36 154.8 89 85.4
Prupe.2G051400 Prunus persica HOM05D003429 ORTHO05D003873 6.9e-36 153.7 89 85.4
PGR031G2936 Punica granatum HOM05D003429 ORTHO05D003873 6.9e-36 153.7 89 85.4
CANSAT56G3732 Cannabis sativa HOM05D003429 ORTHO05D003873 9.0e-36 153.3 90 83.3
Lj9A653G52 Lonicera japonica HOM05D003429 ORTHO05D003873 9.0e-36 153.3 89 84.3
PSO384G1706 Papaver somniferum HOM05D003429 ORTHO05D003873 9.0e-36 153.3 89 84.3
Aa31LG11G7100 Aethionema arabicum HOM05D003429 ORTHO05D003873 1.2e-35 152.9 89 85.4
Cfa010982 Carpinus fangiana HOM05D003429 ORTHO05D003873 1.2e-35 152.9 89 84.3
HanXRQChr16g0510451 Helianthus annuus HOM05D003429 ORTHO05D003873 1.2e-35 152.9 89 85.4
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 1.5e-35 152.5 89 83.1
Glyma.04G003000 Glycine max HOM05D003429 ORTHO05D003873 1.5e-35 152.5 89 83.1
Duzib128G2024 Durio zibethinus HOM05D003429 ORTHO05D003873 2.0e-35 152.1 89 84.3
Hund06843 Selenicereus undatus HOM05D003429 ORTHO05D003873 2.0e-35 152.1 89 84.3
ATR0782G154 Amborella trichopoda HOM05D003429 ORTHO05D003873 2.6e-35 151.8 89 85.4
AT5G06120 Arabidopsis thaliana HOM05D003429 ORTHO05D003873 3.4e-35 151.4 89 84.3
Aqoxy5G00851 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 4.5e-35 151.0 89 83.1
Dinv04984 Davidia involucrata HOM05D003429 ORTHO05D003873 4.5e-35 151.0 89 85.4
Lsat_1_v5_gn_1_118001 Lactuca sativa HOM05D003429 ORTHO05D003873 4.5e-35 151.0 89 84.3
Haze_02954 Corylus avellana HOM05D003429 ORTHO05D003873 5.8e-35 150.6 89 83.1
MELO3C011384.2 Cucumis melo HOM05D003429 ORTHO05D003873 7.6e-35 150.2 89 86.5
Sabra01G0025100 Salix brachista HOM05D003429 ORTHO05D003873 7.6e-35 150.2 89 85.4
Sc09g0004760 Simmondsia chinensis HOM05D003429 ORTHO05D003873 7.6e-35 150.2 89 83.1
THA.LOC104826824 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 7.6e-35 150.2 89 83.1
CiPaw.13G018300 Carya illinoinensis HOM05D003429 ORTHO05D003873 9.9e-35 149.8 89 85.4
AUR62035521 Chenopodium quinoa HOM05D003429 ORTHO05D003873 9.9e-35 149.8 89 83.1
AUR62041296 Chenopodium quinoa HOM05D003429 ORTHO05D003873 9.9e-35 149.8 89 83.1
Gohir.A10G192300 Gossypium hirsutum HOM05D003429 ORTHO05D003873 9.9e-35 149.8 89 85.4
Lj1g0005148 Lotus japonicus HOM05D003429 ORTHO05D003873 9.9e-35 149.8 89 83.1
Nn7g37083 Nelumbo nucifera HOM05D003429 ORTHO05D003873 9.9e-35 149.8 90 83.3
HPP92_028707 Vanilla planifolia HOM05D003429 ORTHO05D003873 9.9e-35 149.8 89 83.1
AL6G16070 Arabidopsis lyrata HOM05D003429 ORTHO05D003873 1.3e-34 149.4 89 83.1
THA.LOC104816588 Tarenaya hassleriana HOM05D003429 ORTHO05D003873 1.3e-34 149.4 89 83.1
Carub.0006s0499 Capsella rubella HOM05D003429 ORTHO05D003873 1.7e-34 149.1 89 84.3
Eucgr.G03181 Eucalyptus grandis HOM05D003429 ORTHO05D003873 1.7e-34 149.1 89 83.1
Ciclev10000149m.g Citrus clementina HOM05D003429 ORTHO05D003873 2.2e-34 148.7 89 84.3
FAN01G2134 Fragaria x ananassa HOM05D003429 ORTHO05D003873 2.2e-34 148.7 89 85.4
DCAR_022673 Daucus carota HOM05D003429 ORTHO05D003873 2.9e-34 148.3 88 85.2
Atru.chr12.1194 Acer truncatum HOM05D003429 ORTHO05D003873 3.8e-34 147.9 89 83.1
C02p02580 Brassica napus HOM05D003429 ORTHO05D003873 3.8e-34 147.9 89 82.0
BolC2t06224H Brassica oleracea HOM05D003429 ORTHO05D003873 3.8e-34 147.9 89 82.0
BraA02t04869Z Brassica rapa HOM05D003429 ORTHO05D003873 3.8e-34 147.9 89 82.0
RhsimUnG0020700 Rhododendron simsii HOM05D003429 ORTHO05D003873 3.8e-34 147.9 89 78.7
Sed0026988 Sechium edule HOM05D003429 ORTHO05D003873 4.9e-34 147.5 89 84.3
Lalb_Chr11g0061181 Lupinus albus HOM05D003429 ORTHO05D003873 6.4e-34 147.1 89 82.0
Prupe.2G050900 Prunus persica HOM05D003429 ORTHO05D003873 6.4e-34 147.1 89 84.3
Actinidia37867 Actinidia chinensis HOM05D003429 ORTHO05D003873 8.4e-34 146.7 89 77.5
PSO339G2530 Papaver somniferum HOM05D003429 ORTHO05D003873 8.4e-34 146.7 89 83.1
Phvul.009G118700 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 8.4e-34 146.7 89 82.0
VMungo1309G0597 Vigna mungo HOM05D003429 ORTHO05D003873 8.4e-34 146.7 89 82.0
Medtr3g118040 Medicago truncatula HOM05D003429 ORTHO05D003873 1.1e-33 146.4 89 83.1
SalBow5G1634 Salvia bowleyana HOM05D003429 ORTHO05D003873 1.4e-33 146.0 89 80.9
TAR629G1055 Trochodendron aralioides HOM05D003429 ORTHO05D003873 1.4e-33 146.0 89 82.0
vmacro07588 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 1.4e-33 146.0 89 77.5
BcaC06g32321 Brassica carinata HOM05D003429 ORTHO05D003873 2.4e-33 145.2 90 81.1
C09p70720 Brassica napus HOM05D003429 ORTHO05D003873 2.4e-33 145.2 90 81.1
BolC9t59828H Brassica oleracea HOM05D003429 ORTHO05D003873 2.4e-33 145.2 90 81.1
Cc00_g07020 Coffea canephora HOM05D003429 ORTHO05D003873 2.4e-33 145.2 89 77.5
ECA248G1206 Erigeron canadensis HOM05D003429 ORTHO05D003873 2.4e-33 145.2 89 82.0
EL10Ac4g08832 Beta vulgaris HOM05D003429 ORTHO05D003873 3.2e-33 144.8 89 84.3
CSS0009838 Camellia sinensis var. sinensis HOM05D003429 ORTHO05D003873 3.2e-33 144.8 89 77.5
Glyma.06G003000 Glycine max HOM05D003429 ORTHO05D003873 3.2e-33 144.8 89 80.9
Migut.B01173 Erythranthe guttata HOM05D003429 ORTHO05D003873 4.2e-33 144.4 89 78.7
Os03g0616700 Oryza sativa ssp. japonica HOM05D003429 ORTHO05D003873 5.5e-33 144.1 89 80.9
SGA_v2.0_scaffold164G38141 Striga asiatica HOM05D003429 ORTHO05D003873 5.5e-33 144.1 89 78.7
A10p30310 Brassica napus HOM05D003429 ORTHO05D003873 7.1e-33 143.7 90 80.0
BraA10t45069Z Brassica rapa HOM05D003429 ORTHO05D003873 7.1e-33 143.7 90 80.0
Manes.11G010000 Manihot esculenta HOM05D003429 ORTHO05D003873 7.1e-33 143.7 89 80.9
Oeu013041.2 Olea europaea HOM05D003429 ORTHO05D003873 7.1e-33 143.7 89 78.7
Psat5g001960 Pisum sativum HOM05D003429 ORTHO05D003873 7.1e-33 143.7 89 78.7
Sp6g36790 Schrenkiella parvula HOM05D003429 ORTHO05D003873 1.2e-32 142.9 89 82.0
Thhalv10012516m.g Eutrema salsugineum HOM05D003429 ORTHO05D003873 1.6e-32 142.5 89 82.0
Pp3c5_25610 Physcomitrium patens HOM05D003429 ORTHO05D003873 2.7e-32 141.7 90 78.9
HPP92_028456 Vanilla planifolia HOM05D003429 ORTHO05D003873 2.7e-32 141.7 89 80.9
BcaB05g21683 Brassica carinata HOM05D003429 ORTHO05D003873 3.5e-32 141.4 89 80.9
Pp3c5_25430 Physcomitrium patens HOM05D003429 ORTHO05D003873 7.9e-32 140.2 90 77.8
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 7.9e-32 140.2 90 78.9
Aqoxy1G01517 Aquilegia oxysepala HOM05D003429 ORTHO05D003873 1.8e-31 139.0 89 79.8
CDE07G0287 Ceratophyllum demersum HOM05D003429 ORTHO05D003873 1.8e-31 139.0 90 78.9
CBR_g30950 Chara braunii HOM05D003429 ORTHO05D003873 1.8e-31 139.0 89 78.7
MSTRG.20488 Avicennia marina HOM05D003429 ORTHO05D003873 8.7e-31 136.7 89 77.5
Zm00001eb278500 Zea mays HOM05D003429 ORTHO05D003873 1.1e-30 136.3 89 77.5
MapolyY_B0019 Marchantia polymorpha HOM05D003429 ORTHO05D003873 7.4e-30 133.7 89 77.5
Nitab4.5_0002094g0090 Nicotiana tabacum HOM05D003429 ORTHO05D003873 9.6e-30 133.3 89 74.2
Actinidia17975 Actinidia chinensis HOM05D003429 ORTHO05D003873 1.6e-29 132.5 89 73.0
unitig_22.g5335 Utricularia gibba HOM05D003429 ORTHO05D003873 1.6e-29 132.5 89 75.3
Nitab4.5_0000211g0060 Nicotiana tabacum HOM05D003429 ORTHO05D003873 2.1e-29 132.1 89 74.2
Peaxi162Scf00139g01028 Petunia axillaris HOM05D003429 ORTHO05D003873 2.1e-29 132.1 89 73.0
Medtr1g051125 Medicago truncatula HOM05D003429 ORTHO05D003873 2.8e-29 131.7 89 71.9
Ca_28163_v3 Cicer arietinum L. HOM05D003429 ORTHO05D003873 3.7e-29 131.3 88 72.7
Sopen01g020360 Solanum pennellii HOM05D003429 ORTHO05D003873 3.7e-29 131.3 89 73.0
DCAR_013522 Daucus carota HOM05D003429 ORTHO05D003873 6.2e-29 130.6 89 73.0
Hund24514 Selenicereus undatus HOM05D003429 ORTHO05D003873 1.1e-28 129.8 89 69.7
Solyc01g056520.3 Solanum lycopersicum HOM05D003429 ORTHO05D003873 1.1e-28 129.8 89 71.9
GSVIVG01025856001 Vitis vinifera HOM05D003429 ORTHO05D003873 1.1e-28 129.8 88 72.7
Glyma.10G104900 Glycine max HOM05D003429 ORTHO05D003873 2.4e-28 128.6 89 69.7
VMungo0720G0379 Vigna mungo HOM05D003429 ORTHO05D003873 2.4e-28 128.6 89 71.9
Mapoly0017s0001 Marchantia polymorpha HOM05D003429 ORTHO05D003873 5.3e-28 127.5 88 73.9
Cpa.g.sc33.148 Carica papaya HOM05D003429 ORTHO05D003873 1.5e-27 125.9 79 78.5
Psat6g086480 Pisum sativum HOM05D003429 ORTHO05D003873 3.4e-27 124.8 88 68.2
QL07p014239 Quercus lobata HOM05D003429 ORTHO05D003873 4.5e-27 124.4 89 69.7
TPR.G13799 Trifolium pratense HOM05D003429 ORTHO05D003873 7.6e-27 123.6 89 68.5
SHI11319 Sapria himalayana HOM05D003429 ORTHO05D003873 1.0e-26 123.2 89 69.7
TWI53G2015 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 2.9e-26 121.7 89 68.5
Phvul.007G243600 Phaseolus vulgaris HOM05D003429 ORTHO05D003873 3.2e-25 118.2 89 68.5
vmacro07757 Vaccinium macrocarpon HOM05D003429 ORTHO05D003873 2.1e-24 115.5 89 66.3
QL04p023522 Quercus lobata HOM05D003429 ORTHO05D003873 2.7e-24 115.2 67 85.1
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 7.9e-24 113.6 90 66.7
PRCOL_00000821 Prasinoderma coloniale HOM05D003429 ORTHO05D003873 3.9e-23 111.3 89 62.9
Actinidia13982 Actinidia chinensis HOM05D003429 ORTHO05D003873 8.7e-23 110.2 67 79.1
Sc13g0000830 Simmondsia chinensis HOM05D003429 ORTHO05D003873 2.5e-22 108.6 89 64.0
Lalb_Chr02g0156721 Lupinus albus HOM05D003429 ORTHO05D003873 6.3e-21 104.0 89 62.9
MCO13G155 Micromonas commoda HOM05D003429 ORTHO05D003873 2.2e-18 95.5 88 56.8
CARHR206820 Cardamine hirsuta HOM05D003429 ORTHO05D003873 1.6e-16 89.4 75 61.3
Actinidia14028 Actinidia chinensis HOM05D003429 ORTHO05D003873 2.3e-15 85.5 59 71.2
AUR62018433 Chenopodium quinoa HOM05D003429 ORTHO05D003873 8.5e-10 67.0 54 61.1
Rhsim09G0101900 Rhododendron simsii HOM05D003429 ORTHO05D003873 3.6e-08 61.6 36 75.0


User provided reference genes

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