Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 1.2e-112 409.8 204 100.0
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 9.6e-46 187.6 193 50.8
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 1.8e-44 183.3 168 55.4
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 1.8e-44 183.3 181 51.9
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 4.1e-44 182.2 168 54.2
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 1.2e-43 180.6 186 52.7
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 1.2e-43 180.6 168 57.1
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 4.5e-43 178.7 196 50.5
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 7.6e-43 177.9 163 55.2
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.0e-42 177.6 153 56.2
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 1.3e-42 177.2 171 52.6
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 1.3e-42 177.2 175 50.9
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 1.7e-42 176.8 153 54.9
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 2.2e-42 176.4 191 48.7
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 2.9e-42 176.0 183 50.3
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 2.9e-42 176.0 178 50.6
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 2.9e-42 176.0 153 57.5
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 3.8e-42 175.6 173 52.0
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 3.8e-42 175.6 203 47.3
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 6.5e-42 174.9 163 55.8
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 6.5e-42 174.9 163 55.8
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 6.5e-42 174.9 163 55.8
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 6.5e-42 174.9 158 54.4
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 6.5e-42 174.9 158 54.4
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 6.5e-42 174.9 158 54.4
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 8.5e-42 174.5 169 52.7
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 1.1e-41 174.1 161 53.4
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 1.1e-41 174.1 153 57.5
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 1.1e-41 174.1 195 47.2
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 1.4e-41 173.7 166 54.2
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.4e-41 173.7 153 56.2
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 1.4e-41 173.7 166 54.8
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.4e-41 173.7 178 53.4
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 2.5e-41 172.9 160 56.9
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 3.2e-41 172.6 183 50.8
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 3.2e-41 172.6 168 51.2
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 4.2e-41 172.2 158 55.7
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 4.2e-41 172.2 158 55.7
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 4.2e-41 172.2 194 49.0
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 7.2e-41 171.4 169 53.8
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 9.3e-41 171.0 198 46.0
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 1.2e-40 170.6 185 50.8
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 2.1e-40 169.9 193 48.2
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 4.6e-40 168.7 158 55.7
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 4.6e-40 168.7 151 55.0
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 4.6e-40 168.7 151 55.0
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 4.6e-40 168.7 163 53.4
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 6.1e-40 168.3 194 46.9
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 7.9e-40 167.9 188 49.5
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 7.9e-40 167.9 176 50.6
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.3e-39 167.2 178 49.4
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 1.8e-39 166.8 176 51.7
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 2.3e-39 166.4 196 46.9
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 2.3e-39 166.4 159 52.8
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 3.0e-39 166.0 172 53.5
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 3.9e-39 165.6 194 47.9
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 8.7e-39 164.5 177 50.3
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 2.5e-38 162.9 159 50.9
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 3.3e-38 162.5 157 52.9
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 5.7e-38 161.8 197 45.2
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 9.7e-38 161.0 151 52.3
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 1.3e-37 160.6 197 43.7
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 1.3e-37 160.6 197 45.2
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 1.3e-37 160.6 156 50.6
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 1.6e-37 160.2 164 47.6
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 1.6e-37 160.2 203 44.8
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 2.2e-37 159.8 164 50.0
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 2.2e-37 159.8 181 45.3
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 3.7e-37 159.1 197 45.2
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 6.3e-37 158.3 169 52.1
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 8.2e-37 157.9 173 49.1
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 1.4e-36 157.1 194 46.4
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 2.4e-36 156.4 148 52.0
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 3.1e-36 156.0 169 46.7
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 4.1e-36 155.6 162 51.2
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 5.3e-36 155.2 199 43.7
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 5.3e-36 155.2 150 51.3
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 6.9e-36 154.8 197 44.2
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 6.9e-36 154.8 157 50.3
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 9.0e-36 154.5 164 47.6
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.5e-35 153.7 191 45.5
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 1.5e-35 153.7 155 51.0
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 2.6e-35 152.9 192 45.8
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 2.6e-35 152.9 157 49.7
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 5.9e-35 151.8 177 46.3
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 7.7e-35 151.4 156 50.0
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.7e-34 150.2 201 42.8
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 1.7e-34 150.2 198 42.9
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 2.2e-34 149.8 183 45.9
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 2.9e-34 149.4 197 41.6
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 2.9e-34 149.4 154 50.6
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 5.0e-34 148.7 130 57.7
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.4e-33 147.1 181 45.9
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 1.4e-33 147.1 137 56.9
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 1.9e-33 146.7 138 52.9
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 9.4e-33 144.4 135 53.3
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 2.7e-32 142.9 157 47.1
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 6.1e-32 141.7 145 52.4
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 6.1e-32 141.7 159 46.5
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 5.1e-31 138.7 189 40.7
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 5.1e-31 138.7 242 36.4
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 2.0e-30 136.7 145 53.1
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 4.1e-28 129.0 78 79.5
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 6.9e-28 128.3 132 51.5
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 2.6e-27 126.3 159 45.3
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 2.2e-26 123.2 119 54.6
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 3.8e-26 122.5 117 56.4
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 1.4e-25 120.6 150 46.7
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 1.9e-25 120.2 118 51.7
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 1.9e-25 120.2 113 58.4
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 1.2e-24 117.5 110 57.3
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 1.6e-24 117.1 118 50.8
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 2.7e-24 116.3 117 54.7
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 6.1e-24 115.2 188 41.5
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 5.2e-23 112.1 119 50.4
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 5.2e-23 112.1 158 39.2
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 1.5e-22 110.5 165 39.4
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 3.3e-22 109.4 117 47.9
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 4.8e-21 105.5 211 33.6
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 7.0e-20 101.7 79 62.0
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 2.0e-19 100.1 165 36.4
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 2.0e-19 100.1 165 36.4
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 1.0e-18 97.8 104 51.0
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 2.5e-17 93.2 105 43.8
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 2.1e-16 90.1 146 38.4
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 6.7e-15 85.1 70 55.7
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 9.1e-12 74.7 83 49.4
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 1.7e-10 70.5 50 66.0
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 2.5e-09 66.6 108 35.2
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 8.8e-07 58.2 74 44.6
MCO02G048 Micromonas commoda HOM05D005768 ORTHO05D007100 2.6e-06 56.6 162 29.0
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 3.4e-06 56.2 196 27.0


User provided reference genes

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