Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27691 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 6.9e-128 460.7 239 100.0
SEGI_03781 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 5.9e-119 431.0 239 92.9
SEGI_36016 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 8.9e-67 257.7 240 56.7
Dinv44320 Davidia involucrata HOM05D005143 ORTHO05D006404 4.6e-39 165.6 232 39.7
Dinv02072 Davidia involucrata HOM05D005143 ORTHO05D006404 1.9e-37 160.2 239 38.1
DCAR_002501 Daucus carota HOM05D005143 ORTHO05D006404 4.3e-37 159.1 229 41.0
arahy.Tifrunner.gnm1.ann1.UTG064 Arachis hypogaea HOM05D005143 ORTHO05D006404 7.3e-37 158.3 240 38.8
RcHm_v2.0_Chr4g0424271 Rosa chinensis HOM05D005143 ORTHO05D006404 1.6e-36 157.1 239 38.1
FvH4_4g19280 Fragaria vesca HOM05D005143 ORTHO05D006404 2.1e-36 156.8 239 37.2
FAN12G3988 Fragaria x ananassa HOM05D005143 ORTHO05D006404 4.8e-36 155.6 239 37.2
Prupe.1G125800 Prunus persica HOM05D005143 ORTHO05D006404 8.1e-36 154.8 231 38.1
VMungo1309G2864 Vigna mungo HOM05D005143 ORTHO05D006404 3.1e-35 152.9 241 39.0
Glyma.09G039500 Glycine max HOM05D005143 ORTHO05D006404 4.0e-35 152.5 230 39.6
MD16G1159000 Malus domestica HOM05D005143 ORTHO05D006404 4.0e-35 152.5 234 35.9
Psat1g158200 Pisum sativum HOM05D005143 ORTHO05D006404 4.0e-35 152.5 230 40.0
Actinidia40351 Actinidia chinensis HOM05D005143 ORTHO05D006404 1.2e-34 151.0 230 40.0
AagrBONN_evm.TU.Sc2ySwM_368.1032 Anthoceros agrestis HOM05D005143 ORTHO05D006404 1.2e-34 151.0 254 37.8
Actinidia15583 Actinidia chinensis HOM05D005143 ORTHO05D006404 2.0e-34 150.2 230 38.7
Medtr2g034880 Medicago truncatula HOM05D005143 ORTHO05D006404 3.4e-34 149.4 230 39.1
Glyma.15G144700 Glycine max HOM05D005143 ORTHO05D006404 7.6e-34 148.3 230 38.7
Hma1.2p1_0013F.1_g008930 Hydrangea macrophylla HOM05D005143 ORTHO05D006404 7.6e-34 148.3 231 36.8
PSO761G0512 Papaver somniferum HOM05D005143 ORTHO05D006404 7.6e-34 148.3 229 37.6
QL06p011304 Quercus lobata HOM05D005143 ORTHO05D006404 7.6e-34 148.3 232 36.2
Nitab4.5_0000169g0050 Nicotiana tabacum HOM05D005143 ORTHO05D006404 9.9e-34 147.9 226 38.1
CSS0004405 Camellia sinensis var. sinensis HOM05D005143 ORTHO05D006404 1.3e-33 147.5 229 38.0
Cfa015478 Carpinus fangiana HOM05D005143 ORTHO05D006404 1.3e-33 147.5 230 37.0
MD13G1158800 Malus domestica HOM05D005143 ORTHO05D006404 1.3e-33 147.5 230 36.5
GSVIVG01035046001 Vitis vinifera HOM05D005143 ORTHO05D006404 1.7e-33 147.1 231 35.9
CiPaw.01G142400 Carya illinoinensis HOM05D005143 ORTHO05D006404 2.2e-33 146.7 232 35.3
PSO210G3751 Papaver somniferum HOM05D005143 ORTHO05D006404 2.2e-33 146.7 229 37.1
Ca_01881_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 2.9e-33 146.4 230 38.7
Ca_01895_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 2.9e-33 146.4 230 38.7
Phvul.009G253600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 3.8e-33 146.0 230 38.7
Lj6A685T16 Lonicera japonica HOM05D005143 ORTHO05D006404 4.9e-33 145.6 231 36.4
Lj6g0005650 Lotus japonicus HOM05D005143 ORTHO05D006404 4.9e-33 145.6 230 38.7
Lalb_Chr20g0121021 Lupinus albus HOM05D005143 ORTHO05D006404 4.9e-33 145.6 230 38.3
TPR.G27704 Trifolium pratense HOM05D005143 ORTHO05D006404 6.4e-33 145.2 230 38.3
Ah.04g154920 Amaranthus hybridus HOM05D005143 ORTHO05D006404 8.4e-33 144.8 232 35.3
ClCG05G006400 Citrullus lanatus HOM05D005143 ORTHO05D006404 8.4e-33 144.8 237 36.7
Nitab4.5_0001695g0020 Nicotiana tabacum HOM05D005143 ORTHO05D006404 1.1e-32 144.4 226 38.1
TAR362G0369 Trochodendron aralioides HOM05D005143 ORTHO05D006404 1.1e-32 144.4 241 36.9
Potri.010G140400 Populus trichocarpa HOM05D005143 ORTHO05D006404 1.4e-32 144.1 231 35.5
DCAR_030483 Daucus carota HOM05D005143 ORTHO05D006404 4.2e-32 142.5 231 35.5
Gorai.011G195900 Gossypium raimondii HOM05D005143 ORTHO05D006404 4.2e-32 142.5 248 35.5
Lsat_1_v5_gn_6_115260 Lactuca sativa HOM05D005143 ORTHO05D006404 4.2e-32 142.5 237 36.3
MSTRG.21781 Avicennia marina HOM05D005143 ORTHO05D006404 7.1e-32 141.7 246 36.2
Haze_01089 Corylus avellana HOM05D005143 ORTHO05D006404 1.2e-31 141.0 223 36.8
vmacro08077 Vaccinium macrocarpon HOM05D005143 ORTHO05D006404 1.2e-31 141.0 236 35.2
CAN.G1016.6 Capsicum annuum HOM05D005143 ORTHO05D006404 1.6e-31 140.6 226 36.7
CsaV3_3G015020 Cucumis sativus L. HOM05D005143 ORTHO05D006404 1.6e-31 140.6 238 35.7
Duzib052G1152 Durio zibethinus HOM05D005143 ORTHO05D006404 1.6e-31 140.6 231 35.5
Gohir.A10G168900 Gossypium hirsutum HOM05D005143 ORTHO05D006404 1.6e-31 140.6 248 35.1
Gohir.D10G175100 Gossypium hirsutum HOM05D005143 ORTHO05D006404 1.6e-31 140.6 248 35.1
Thecc.04G294800 Theobroma cacao HOM05D005143 ORTHO05D006404 1.6e-31 140.6 232 34.5
VMungo1215G3234 Vigna mungo HOM05D005143 ORTHO05D006404 2.1e-31 140.2 217 38.7
CiPaw.02G077100 Carya illinoinensis HOM05D005143 ORTHO05D006404 2.7e-31 139.8 232 36.6
FAN07G0192 Fragaria x ananassa HOM05D005143 ORTHO05D006404 2.7e-31 139.8 209 37.3
Ciclev10007083m.g Citrus clementina HOM05D005143 ORTHO05D006404 3.5e-31 139.4 227 37.0
Duzib151G0017 Durio zibethinus HOM05D005143 ORTHO05D006404 3.5e-31 139.4 230 34.8
TWI09G1317 Tripterygium wilfordii HOM05D005143 ORTHO05D006404 3.5e-31 139.4 227 36.6
Manes.15G007000 Manihot esculenta HOM05D005143 ORTHO05D006404 4.6e-31 139.0 231 34.2
Sabra10G0108500 Salix brachista HOM05D005143 ORTHO05D006404 4.6e-31 139.0 231 34.6
Migut.N00060 Erythranthe guttata HOM05D005143 ORTHO05D006404 7.9e-31 138.3 237 33.3
Cpa.g.sc9.99 Carica papaya HOM05D005143 ORTHO05D006404 1.0e-30 137.9 229 36.7
Cc03_g01170 Coffea canephora HOM05D005143 ORTHO05D006404 1.0e-30 137.9 226 36.7
COL.COLO4_34676 Corchorus olitorius HOM05D005143 ORTHO05D006404 1.0e-30 137.9 248 33.9
SGA_v2.0_scaffold119G32680 Striga asiatica HOM05D005143 ORTHO05D006404 1.0e-30 137.9 231 34.6
EL10Ac3g04926 Beta vulgaris HOM05D005143 ORTHO05D006404 3.0e-30 136.3 241 32.0
Nn3g21616 Nelumbo nucifera HOM05D005143 ORTHO05D006404 3.0e-30 136.3 223 36.8
Aqoxy2G02819 Aquilegia oxysepala HOM05D005143 ORTHO05D006404 5.1e-30 135.6 240 34.6
MELO3C006698.2 Cucumis melo HOM05D005143 ORTHO05D006404 5.1e-30 135.6 250 34.8
Lalb_Chr18g0058921 Lupinus albus HOM05D005143 ORTHO05D006404 5.1e-30 135.6 240 37.1
PGSC0003DMG400014988 Solanum tuberosum HOM05D005143 ORTHO05D006404 5.1e-30 135.6 226 35.4
Potri.008G108900 Populus trichocarpa HOM05D005143 ORTHO05D006404 6.7e-30 135.2 231 34.2
Potri.T170901 Populus trichocarpa HOM05D005143 ORTHO05D006404 6.7e-30 135.2 231 34.2
Glyma.17G031200 Glycine max HOM05D005143 ORTHO05D006404 8.7e-30 134.8 241 34.9
Sopen01g026590 Solanum pennellii HOM05D005143 ORTHO05D006404 8.7e-30 134.8 226 35.4
ECA246G2788 Erigeron canadensis HOM05D005143 ORTHO05D006404 1.1e-29 134.4 242 36.8
Sed0010751 Sechium edule HOM05D005143 ORTHO05D006404 1.5e-29 134.0 237 35.9
Solyc01g060450.3 Solanum lycopersicum HOM05D005143 ORTHO05D006404 1.5e-29 134.0 226 35.4
Atru.chr4.2951 Acer truncatum HOM05D005143 ORTHO05D006404 2.5e-29 133.3 249 34.1
Eucgr.A00195 Eucalyptus grandis HOM05D005143 ORTHO05D006404 4.3e-29 132.5 232 34.9
Oeu016479.2 Olea europaea HOM05D005143 ORTHO05D006404 4.3e-29 132.5 226 35.8
Phvul.003G110600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 4.3e-29 132.5 224 34.8
CDE11G0634 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 9.6e-29 131.3 227 33.9
SalBow5G4838 Salvia bowleyana HOM05D005143 ORTHO05D006404 9.6e-29 131.3 226 35.4
PGR031G1222 Punica granatum HOM05D005143 ORTHO05D006404 1.3e-28 131.0 234 33.3
TPR.G27702 Trifolium pratense HOM05D005143 ORTHO05D006404 1.3e-28 131.0 224 39.7
Sabra08G0082500 Salix brachista HOM05D005143 ORTHO05D006404 2.8e-28 129.8 229 33.6
Sc25g0003440 Simmondsia chinensis HOM05D005143 ORTHO05D006404 2.8e-28 129.8 233 34.8
HPP92_001064 Vanilla planifolia HOM05D005143 ORTHO05D006404 6.2e-28 128.6 218 38.5
THA.LOC104818896 Tarenaya hassleriana HOM05D005143 ORTHO05D006404 1.4e-27 127.5 226 35.8
AUR62035066 Chenopodium quinoa HOM05D005143 ORTHO05D006404 1.8e-27 127.1 233 31.3
Aa31LG11G7840 Aethionema arabicum HOM05D005143 ORTHO05D006404 3.1e-27 126.3 225 36.9
BolC7t44512H Brassica oleracea HOM05D005143 ORTHO05D006404 4.0e-27 125.9 225 35.6
Thhalv10005363m.g Eutrema salsugineum HOM05D005143 ORTHO05D006404 9.0e-27 124.8 237 35.9
C07p39840 Brassica napus HOM05D005143 ORTHO05D006404 1.2e-26 124.4 225 35.6
Hund02954 Selenicereus undatus HOM05D005143 ORTHO05D006404 1.2e-26 124.4 256 33.2
MBI19_g29991_MAGBIO Magnolia biondii HOM05D005143 ORTHO05D006404 2.0e-26 123.6 235 35.7
Carub.0008s0919 Capsella rubella HOM05D005143 ORTHO05D006404 2.6e-26 123.2 226 37.2
CANSAT78G1129 Cannabis sativa HOM05D005143 ORTHO05D006404 5.8e-26 122.1 228 32.9
Medtr2g034890 Medicago truncatula HOM05D005143 ORTHO05D006404 5.8e-26 122.1 232 36.6
Sp2g19670 Schrenkiella parvula HOM05D005143 ORTHO05D006404 5.8e-26 122.1 225 36.0
BcaC03g17714 Brassica carinata HOM05D005143 ORTHO05D006404 9.9e-26 121.3 225 36.0
A02p38010 Brassica napus HOM05D005143 ORTHO05D006404 9.9e-26 121.3 225 36.0
BolC2t11792H Brassica oleracea HOM05D005143 ORTHO05D006404 9.9e-26 121.3 225 36.0
BraA02t08785Z Brassica rapa HOM05D005143 ORTHO05D006404 9.9e-26 121.3 225 36.0
CARHR182240 Cardamine hirsuta HOM05D005143 ORTHO05D006404 1.3e-25 120.9 225 36.0
BcaB07g34148 Brassica carinata HOM05D005143 ORTHO05D006404 1.7e-25 120.6 225 36.0
C02p57210 Brassica napus HOM05D005143 ORTHO05D006404 2.9e-25 119.8 225 35.6
Sabra08G0082600 Salix brachista HOM05D005143 ORTHO05D006404 2.9e-25 119.8 219 32.9
BcaNung02596 Brassica carinata HOM05D005143 ORTHO05D006404 4.9e-25 119.0 225 35.1
AL8G22960 Arabidopsis lyrata HOM05D005143 ORTHO05D006404 8.4e-25 118.2 225 35.6
AT5G49320 Arabidopsis thaliana HOM05D005143 ORTHO05D006404 1.4e-24 117.5 225 35.1
HanXRQChr03g0093441 Helianthus annuus HOM05D005143 ORTHO05D006404 2.4e-24 116.7 212 35.8
arahy.Tifrunner.gnm1.ann1.PXPP98 Arachis hypogaea HOM05D005143 ORTHO05D006404 2.1e-23 113.6 181 35.4
FAN12G2949 Fragaria x ananassa HOM05D005143 ORTHO05D006404 3.0e-22 109.8 174 34.5
arahy.Tifrunner.gnm1.ann1.W9GTE1 Arachis hypogaea HOM05D005143 ORTHO05D006404 5.1e-22 109.0 218 33.9
arahy.Tifrunner.gnm1.ann1.RF9CFS Arachis hypogaea HOM05D005143 ORTHO05D006404 6.7e-22 108.6 233 33.9
Lalb_Chr12g0200981 Lupinus albus HOM05D005143 ORTHO05D006404 1.1e-21 107.8 242 31.0
Zm00001eb127640 Zea mays HOM05D005143 ORTHO05D006404 5.6e-21 105.5 209 34.0
CDE05G0725 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 1.6e-20 104.0 169 34.3
Peaxi162Scf00065g00033 Petunia axillaris HOM05D005143 ORTHO05D006404 1.4e-19 100.9 226 31.0
ATR0706G251 Amborella trichopoda HOM05D005143 ORTHO05D006404 1.8e-19 100.5 234 32.5
TAR633G2465 Trochodendron aralioides HOM05D005143 ORTHO05D006404 3.1e-19 99.8 130 39.2
SGA_v2.0_scaffold91G28048 Striga asiatica HOM05D005143 ORTHO05D006404 4.0e-19 99.4 231 32.0
Rhsim04G0232200 Rhododendron simsii HOM05D005143 ORTHO05D006404 1.5e-18 97.4 236 30.1
Os01g0253400 Oryza sativa ssp. japonica HOM05D005143 ORTHO05D006404 1.0e-17 94.7 215 30.7
Nitab4.5_0008735g0010 Nicotiana tabacum HOM05D005143 ORTHO05D006404 2.3e-14 83.6 194 35.1
Nitab4.5_0000531g0070 Nicotiana tabacum HOM05D005143 ORTHO05D006404 1.9e-13 80.5 194 33.5
Oeu006437.1 Olea europaea HOM05D005143 ORTHO05D006404 5.7e-13 79.0 139 40.3
Nitab4.5_0005463g0090 Nicotiana tabacum HOM05D005143 ORTHO05D006404 5.9e-10 68.9 155 30.3
Carub.0008s0727 Capsella rubella HOM05D005143 ORTHO05D006404 2.2e-09 67.0 165 29.1
AUR62043573 Chenopodium quinoa HOM05D005143 ORTHO05D006404 2.2e-09 67.0 143 25.9
Hund11951 Selenicereus undatus HOM05D005143 ORTHO05D006404 6.5e-09 65.5 141 33.3
AUR62016151 Chenopodium quinoa HOM05D005143 ORTHO05D006404 1.1e-08 64.7 142 31.7
CDE05G1990 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 7.9e-07 58.5 179 26.3
Aqoxy3G02055 Aquilegia oxysepala HOM05D002819 ORTHO05D003207 5.1e-06 55.8 175 30.9
SMO118G0365 Selaginella moellendorffii HOM05D005143 ORTHO05D006404 5.1e-06 55.8 144 31.2
Sc19g0000260 Simmondsia chinensis HOM05D002819 ORTHO05D003207 8.8e-06 55.1 174 33.3


User provided reference genes

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