Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27588 Sequoiadendron giganteum HOM05D004388 ORTHO05D005106 3.0e-108 395.2 202 100.0
Pp3c5_10730 Physcomitrium patens HOM05D004388 ORTHO05D005106 2.4e-12 76.6 126 44.4
Mapoly0043s0110 Marchantia polymorpha HOM05D004388 ORTHO05D005106 1.5e-11 73.9 122 41.8
Pp3c6_20300 Physcomitrium patens HOM05D004388 ORTHO05D005106 1.0e-10 71.2 126 42.1
SMO361G0239 Selaginella moellendorffii HOM05D004388 ORTHO05D005106 8.4e-10 68.2 119 37.0
AagrBONN_evm.TU.Sc2ySwM_228.5818 Anthoceros agrestis HOM05D004388 ORTHO05D005106 4.2e-09 65.9 103 41.7
Zm00001eb058590 Zea mays HOM05D004388 ORTHO05D005106 2.1e-08 63.5 120 38.3
Zm00001eb214080 Zea mays HOM05D004388 ORTHO05D005106 2.1e-08 63.5 119 38.7
Glyma.20G008600 Glycine max HOM05D004388 ORTHO05D005106 4.6e-08 62.4 128 37.5
Ciclev10030439m.g Citrus clementina HOM05D004388 ORTHO05D005106 1.0e-07 61.2 127 33.9
THA.LOC104803691 Tarenaya hassleriana HOM05D004388 ORTHO05D005106 1.3e-07 60.8 95 40.0
AUR62040093 Chenopodium quinoa HOM05D004388 ORTHO05D005106 1.8e-07 60.5 125 35.2
FAN03G2535 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.8e-07 60.5 127 35.4
FAN06G4461 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.8e-07 60.5 127 34.6
FAN15G0910 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.8e-07 60.5 127 35.4
AUR62033874 Chenopodium quinoa HOM05D004388 ORTHO05D005106 2.3e-07 60.1 128 35.9
COL.COLO4_26416 Corchorus olitorius HOM05D004388 ORTHO05D005106 2.3e-07 60.1 126 31.0
Manes.15G145400 Manihot esculenta HOM05D004388 ORTHO05D005106 2.3e-07 60.1 129 34.9
BcaC07g40816 Brassica carinata HOM05D004388 ORTHO05D005106 3.0e-07 59.7 125 36.0
A09p55160 Brassica napus HOM05D004388 ORTHO05D005106 3.0e-07 59.7 125 36.0
C08p38090 Brassica napus HOM05D004388 ORTHO05D005106 3.0e-07 59.7 125 36.0
BolC8t51384H Brassica oleracea HOM05D004388 ORTHO05D005106 3.0e-07 59.7 125 36.0
BraA09t40924Z Brassica rapa HOM05D004388 ORTHO05D005106 3.0e-07 59.7 125 36.0
PSO170G0356 Papaver somniferum HOM05D004388 ORTHO05D005106 3.0e-07 59.7 125 34.4
Dinv36015 Davidia involucrata HOM05D004388 ORTHO05D005106 3.9e-07 59.3 126 34.1
COL.COLO4_17768 Corchorus olitorius HOM05D004388 ORTHO05D005106 5.1e-07 58.9 122 34.4
SGA_v2.0_scaffold58G20597 Striga asiatica HOM05D004388 ORTHO05D005106 5.1e-07 58.9 130 34.6
Cfa018482 Carpinus fangiana HOM05D004388 ORTHO05D005106 6.7e-07 58.5 127 37.8
FvH4_7g04430 Fragaria vesca HOM05D004388 ORTHO05D005106 6.7e-07 58.5 127 33.9
FAN06G3575 Fragaria x ananassa HOM05D004388 ORTHO05D005106 6.7e-07 58.5 127 33.9
Peaxi162Scf00016g01338 Petunia axillaris HOM05D004388 ORTHO05D005106 6.7e-07 58.5 107 33.6
Ah.09g229630 Amaranthus hybridus HOM05D004388 ORTHO05D005106 8.7e-07 58.2 132 37.1
ATR0733G197 Amborella trichopoda HOM05D004388 ORTHO05D005106 8.7e-07 58.2 127 33.9
arahy.Tifrunner.gnm1.ann1.2I4SWN Arachis hypogaea HOM05D004388 ORTHO05D005106 8.7e-07 58.2 99 39.4
FAN27G3490 Fragaria x ananassa HOM05D004388 ORTHO05D005106 8.7e-07 58.2 127 35.4
Gorai.010G015700 Gossypium raimondii HOM05D004388 ORTHO05D005106 8.7e-07 58.2 129 33.3
Os03g0765900 Oryza sativa ssp. japonica HOM05D004388 ORTHO05D005106 8.7e-07 58.2 125 37.6
Aqoxy6G00936 Aquilegia oxysepala HOM05D004388 ORTHO05D005106 1.1e-06 57.8 128 35.2
ClCG02G005540 Citrullus lanatus HOM05D004388 ORTHO05D005106 1.1e-06 57.8 175 28.6
Lsat_1_v5_gn_7_88020 Lactuca sativa HOM05D004388 ORTHO05D005106 1.1e-06 57.8 131 30.5
Lalb_Chr11g0062471 Lupinus albus HOM05D004388 ORTHO05D005106 1.1e-06 57.8 123 35.0
Nn6g32144 Nelumbo nucifera HOM05D004388 ORTHO05D005106 1.1e-06 57.8 128 32.0
Thhalv10001257m.g Eutrema salsugineum HOM05D004388 ORTHO05D005106 1.5e-06 57.4 125 35.2
Oeu034076.1 Olea europaea HOM05D004388 ORTHO05D005106 1.5e-06 57.4 125 35.2
EL10Ac1g01755 Beta vulgaris HOM05D004388 ORTHO05D005106 1.9e-06 57.0 134 32.1
CAN.G322.84 Capsicum annuum HOM05D004388 ORTHO05D005106 1.9e-06 57.0 125 31.2
CiPaw.16G051700 Carya illinoinensis HOM05D004388 ORTHO05D005106 1.9e-06 57.0 131 35.1
FvH4_2g07330 Fragaria vesca HOM05D004388 ORTHO05D005106 1.9e-06 57.0 127 35.4
FAN24G3543 Fragaria x ananassa HOM05D004388 ORTHO05D005106 1.9e-06 57.0 127 35.4
FAN10G0172 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.5e-06 56.6 127 33.1
FAN20G1062 Fragaria x ananassa HOM05D004388 ORTHO05D005106 2.5e-06 56.6 100 36.0
HanXRQChr16g0506081 Helianthus annuus HOM05D004388 ORTHO05D005106 2.5e-06 56.6 128 33.6
Sp4g07480 Schrenkiella parvula HOM05D004388 ORTHO05D005106 2.5e-06 56.6 125 34.4
CANSAT25G3863 Cannabis sativa HOM05D004388 ORTHO05D005106 3.3e-06 56.2 130 33.1
MELO3C018419.2 Cucumis melo HOM05D004388 ORTHO05D005106 3.3e-06 56.2 126 32.5
Nitab4.5_0001401g0180 Nicotiana tabacum HOM05D004388 ORTHO05D005106 3.3e-06 56.2 122 31.1
CsaV3_7G010090 Cucumis sativus L. HOM05D004388 ORTHO05D005106 4.3e-06 55.8 124 29.8
Peaxi162Scf00684g00563 Petunia axillaris HOM05D004388 ORTHO05D005106 4.3e-06 55.8 96 33.3
Cc02_g18220 Coffea canephora HOM05D004388 ORTHO05D005106 5.7e-06 55.5 126 34.9
PSO541G0781 Papaver somniferum HOM05D004388 ORTHO05D005106 5.7e-06 55.5 125 31.2
Phvul.003G011200 Phaseolus vulgaris HOM05D004388 ORTHO05D005106 5.7e-06 55.5 125 32.0
TAR376G0986 Trochodendron aralioides HOM05D004388 ORTHO05D005106 5.7e-06 55.5 127 31.5
VMungo1215G1405 Vigna mungo HOM05D004388 ORTHO05D005106 5.7e-06 55.5 125 32.0
Eucgr.G01518 Eucalyptus grandis HOM05D004388 ORTHO05D005106 7.4e-06 55.1 127 33.1
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 7.4e-06 55.1 124 32.3
BcaB01g03018 Brassica carinata HOM05D004388 ORTHO05D005106 9.7e-06 54.7 124 33.1
CSS0016442 Camellia sinensis var. sinensis HOM05D004388 ORTHO05D005106 9.7e-06 54.7 128 32.8
Cfa004944 Carpinus fangiana HOM05D004388 ORTHO05D005106 9.7e-06 54.7 86 36.0
Lalb_Chr10g0095391 Lupinus albus HOM05D004388 ORTHO05D005106 9.7e-06 54.7 126 31.0
Manes.05G168800 Manihot esculenta HOM05D004388 ORTHO05D005106 9.7e-06 54.7 124 33.1
PGR042G3241 Punica granatum HOM05D004388 ORTHO05D005106 9.7e-06 54.7 85 36.5
VMungo1309G1869 Vigna mungo HOM05D004388 ORTHO05D005106 9.7e-06 54.7 112 34.8


User provided reference genes

Program Settings