Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27426 Sequoiadendron giganteum HOM05D030784 ORTHO05D013013 1.1e-60 236.5 124 100.0
SEGI_32046 Sequoiadendron giganteum HOM05D030784 ORTHO05D013013 2.7e-59 231.9 124 97.6
SEGI_19858 Sequoiadendron giganteum HOM05D030784 ORTHO05D013013 8.2e-32 140.6 78 96.2
SEGI_03928 Sequoiadendron giganteum HOM05D030784 ORTHO05D013013 1.0e-18 97.1 123 50.4
SEGI_10409 Sequoiadendron giganteum HOM05D000832 ORTHO05D000982 1.8e-15 86.3 124 49.2
Manes.06G074600 Manihot esculenta HOM05D000832 ORTHO05D000982 3.0e-10 68.9 124 38.7
PGR102G0673 Punica granatum HOM05D000832 ORTHO05D000982 3.0e-10 68.9 124 39.5
Dinv16529 Davidia involucrata HOM05D000832 ORTHO05D000982 4.0e-10 68.6 124 39.5
MSTRG.2271 Avicennia marina HOM05D000832 ORTHO05D000982 5.2e-10 68.2 124 38.7
Psat2g088840 Pisum sativum HOM05D000832 ORTHO05D000982 5.2e-10 68.2 124 37.9
CDE07G1750 Ceratophyllum demersum HOM05D000832 ORTHO05D000982 6.8e-10 67.8 124 38.7
Glyma.02G118180 Glycine max HOM05D000832 ORTHO05D013013 6.8e-10 67.8 124 38.7
Glyma.02G130896 Glycine max HOM05D000832 ORTHO05D013013 6.8e-10 67.8 124 38.7
TPR.G2687 Trifolium pratense HOM05D000832 ORTHO05D000982 6.8e-10 67.8 124 39.5
TAR702G0001 Trochodendron aralioides HOM05D000832 ORTHO05D000982 6.8e-10 67.8 124 38.7
Atru.chr11.1403 Acer truncatum HOM05D000832 ORTHO05D000982 8.8e-10 67.4 124 37.9
Manes.14G095900 Manihot esculenta HOM05D000832 ORTHO05D000982 8.8e-10 67.4 124 38.7
Dinv05809 Davidia involucrata HOM05D000832 ORTHO05D000982 1.2e-09 67.0 124 38.7
SGA_v2.0_scaffold14G06799 Striga asiatica HOM05D000832 ORTHO05D000982 1.2e-09 67.0 124 38.7
TAR371G0210 Trochodendron aralioides HOM05D000832 ORTHO05D000982 1.5e-09 66.6 124 37.9
Cpa.g.sc1.236 Carica papaya HOM05D000832 ORTHO05D000982 2.0e-09 66.2 124 37.9
Eucgr.B03067 Eucalyptus grandis HOM05D000832 ORTHO05D000982 2.0e-09 66.2 124 38.7
Glyma.01G091000 Glycine max HOM05D000832 ORTHO05D000982 2.6e-09 65.9 124 37.9
Glyma.02G118228 Glycine max HOM05D000832 ORTHO05D013013 2.6e-09 65.9 124 37.9
Nn3g17670 Nelumbo nucifera HOM05D000832 ORTHO05D000982 3.4e-09 65.5 124 37.1
MELO3C005348.2 Cucumis melo HOM05D000832 ORTHO05D000982 4.4e-09 65.1 124 37.1
Cfa008782 Carpinus fangiana HOM05D000832 ORTHO05D000982 5.7e-09 64.7 124 38.7
TWI31G0281 Tripterygium wilfordii HOM05D000832 ORTHO05D000982 5.7e-09 64.7 124 37.1
C06p37340 Brassica napus HOM05D000832 ORTHO05D000982 7.5e-09 64.3 124 38.7
Haze_11794 Corylus avellana HOM05D000832 ORTHO05D000982 7.5e-09 64.3 124 38.7
Phvul.003G024800 Phaseolus vulgaris HOM05D000832 ORTHO05D000982 7.5e-09 64.3 124 37.9
Aqoxy3G03861 Aquilegia oxysepala HOM05D000832 ORTHO05D000982 9.8e-09 63.9 124 36.3
CiPaw.05G116300 Carya illinoinensis HOM05D000832 ORTHO05D000982 9.8e-09 63.9 124 38.7
Hma1.2p1_0406F.1_g145940 Hydrangea macrophylla HOM05D000832 ORTHO05D000982 9.8e-09 63.9 124 36.3
Lj2g0012347 Lotus japonicus HOM05D000832 ORTHO05D000982 9.8e-09 63.9 124 36.3
Nn4g23672 Nelumbo nucifera HOM05D000832 ORTHO05D000982 9.8e-09 63.9 124 36.3
Peaxi162Scf00614g00038 Petunia axillaris HOM05D000832 ORTHO05D000982 9.8e-09 63.9 124 37.9
THA.LOC104808410 Tarenaya hassleriana HOM05D000832 ORTHO05D000982 9.8e-09 63.9 124 37.9
CAN.G44.11 Capsicum annuum HOM05D000832 ORTHO05D000982 1.3e-08 63.5 124 37.1
Nitab4.5_0000221g0050 Nicotiana tabacum HOM05D000832 ORTHO05D000982 1.3e-08 63.5 124 37.1
Nitab4.5_0003669g0010 Nicotiana tabacum HOM05D000832 ORTHO05D000982 1.3e-08 63.5 124 37.1
Potri.008G114200 Populus trichocarpa HOM05D000832 ORTHO05D000982 1.3e-08 63.5 124 38.7
Potri.010G131800 Populus trichocarpa HOM05D000832 ORTHO05D000982 1.3e-08 63.5 124 37.1
Sabra08G0086500 Salix brachista HOM05D000832 ORTHO05D000982 1.3e-08 63.5 124 38.7
VMungo1215G1721 Vigna mungo HOM05D000832 ORTHO05D000982 1.3e-08 63.5 124 37.1
A07p31800 Brassica napus HOM05D000832 ORTHO05D000982 1.7e-08 63.2 124 37.9
BolC6t38836H Brassica oleracea HOM05D000832 ORTHO05D000982 1.7e-08 63.2 124 37.9
BraA07t30807Z Brassica rapa HOM05D000832 ORTHO05D000982 1.7e-08 63.2 124 37.9
Lalb_Chr02g0151871 Lupinus albus HOM05D000832 ORTHO05D000982 1.7e-08 63.2 124 36.3
CSS0044860 Camellia sinensis var. sinensis HOM05D000832 ORTHO05D000982 2.2e-08 62.8 124 37.1
Rhsim09G0114100 Rhododendron simsii HOM05D000832 ORTHO05D000982 2.2e-08 62.8 124 39.5
Thecc.02G363600 Theobroma cacao HOM05D000832 ORTHO05D000982 2.2e-08 62.8 124 37.9
Carub.0001s2485 Capsella rubella HOM05D000832 ORTHO05D000982 2.8e-08 62.4 124 37.9
Duzib248G1658 Durio zibethinus HOM05D000832 ORTHO05D000982 2.8e-08 62.4 124 37.9
QL03p045000 Quercus lobata HOM05D000832 ORTHO05D000982 2.8e-08 62.4 124 36.3
Solyc04g006970.4 Solanum lycopersicum HOM05D000832 ORTHO05D000982 2.8e-08 62.4 124 36.3
Sopen04g002020 Solanum pennellii HOM05D000832 ORTHO05D000982 2.8e-08 62.4 124 36.3
AL1G39660 Arabidopsis lyrata HOM05D000832 ORTHO05D000982 3.7e-08 62.0 124 37.9
CARHR025810 Cardamine hirsuta HOM05D000832 ORTHO05D000982 3.7e-08 62.0 124 37.9
CsaV3_5G028880 Cucumis sativus L. HOM05D000832 ORTHO05D000982 3.7e-08 62.0 122 36.1
Lj3A1022G56 Lonicera japonica HOM05D000832 ORTHO05D000982 3.7e-08 62.0 125 36.8
Lj6A768T59 Lonicera japonica HOM05D000832 ORTHO05D000982 3.7e-08 62.0 124 35.5
Oeu024113.1 Olea europaea HOM05D000832 ORTHO05D000982 3.7e-08 62.0 124 37.1
vmacro10512 Vaccinium macrocarpon HOM05D000832 ORTHO05D000982 3.7e-08 62.0 124 36.3
CSS0027131 Camellia sinensis var. sinensis HOM05D000832 ORTHO05D000982 4.9e-08 61.6 124 36.3
CiPaw.06G099100 Carya illinoinensis HOM05D000832 ORTHO05D000982 4.9e-08 61.6 124 37.9
ClCG01G005810 Citrullus lanatus HOM05D000832 ORTHO05D000982 6.3e-08 61.2 124 34.7
Thhalv10006672m.g Eutrema salsugineum HOM05D000832 ORTHO05D000982 6.3e-08 61.2 124 37.1
Sabra10G0100500 Salix brachista HOM05D000832 ORTHO05D000982 6.3e-08 61.2 124 36.3
AL2G27680 Arabidopsis lyrata HOM05D000832 ORTHO05D000982 8.3e-08 60.8 124 37.9
AT1G68750 Arabidopsis thaliana HOM05D000832 ORTHO05D000982 8.3e-08 60.8 124 37.9
PGSC0003DMG400007466 Solanum tuberosum HOM05D000832 ORTHO05D000982 8.3e-08 60.8 124 35.5
BcaC05g26646 Brassica carinata HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 37.1
BcaC05g26647 Brassica carinata HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 37.1
BcaNung06368 Brassica carinata HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 37.1
A09p39680 Brassica napus HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 37.1
C05p24840 Brassica napus HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 37.1
BolC5t31213H Brassica oleracea HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 37.1
BraA09t39467Z Brassica rapa HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 37.1
Migut.E00286 Erythranthe guttata HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 36.3
Lj5g0020451 Lotus japonicus HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 35.5
Peaxi162Scf00369g00124 Petunia axillaris HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 36.3
SHI24310 Sapria himalayana HOM05D000832 ORTHO05D000982 1.1e-07 60.5 124 35.5
arahy.Tifrunner.gnm1.ann1.7GR9X4 Arachis hypogaea HOM05D000832 ORTHO05D013013 1.4e-07 60.1 124 35.5
Carub.0002s1530 Capsella rubella HOM05D000832 ORTHO05D000982 1.4e-07 60.1 124 36.3
Ca_10524_v3 Cicer arietinum L. HOM05D000832 ORTHO05D000982 1.4e-07 60.1 124 35.5
Actinidia14835 Actinidia chinensis HOM05D000832 ORTHO05D000982 1.8e-07 59.7 124 35.5
Medtr0002s0890 Medicago truncatula HOM05D000832 ORTHO05D000982 2.4e-07 59.3 124 36.3
SMO146G0010 Selaginella moellendorffii HOM05D000832 ORTHO05D000982 2.4e-07 59.3 124 33.9
TPR.G9800 Trifolium pratense HOM05D000832 ORTHO05D000982 2.4e-07 59.3 124 34.7
GSVIVG01011979001 Vitis vinifera HOM05D000832 ORTHO05D000982 2.4e-07 59.3 124 35.5
Ciclev10030580m.g Citrus clementina HOM05D000832 ORTHO05D000982 3.1e-07 58.9 124 34.7
COL.COLO4_07850 Corchorus olitorius HOM05D000832 ORTHO05D000982 3.1e-07 58.9 124 36.3
Psat6g181480 Pisum sativum HOM05D000832 ORTHO05D000982 4.1e-07 58.5 124 33.9
arahy.Tifrunner.gnm1.ann1.WRC151 Arachis hypogaea HOM05D000832 ORTHO05D000982 5.4e-07 58.2 124 33.9
arahy.Tifrunner.gnm1.ann1.X6HICW Arachis hypogaea HOM05D000832 ORTHO05D000982 5.4e-07 58.2 124 33.9
MD13G1049200 Malus domestica HOM05D000832 ORTHO05D000982 5.4e-07 58.2 124 36.3
HPP92_011592 Vanilla planifolia HOM05D000832 ORTHO05D000982 5.4e-07 58.2 124 34.7
Cc11_g10810 Coffea canephora HOM05D000832 ORTHO05D000982 7.0e-07 57.8 124 34.7
Medtr1g094010 Medicago truncatula HOM05D000832 ORTHO05D000982 7.0e-07 57.8 124 33.9
Phvul.007G101300 Phaseolus vulgaris HOM05D000832 ORTHO05D000982 9.2e-07 57.4 124 34.7
Sc04g0006860 Simmondsia chinensis HOM05D000832 ORTHO05D000982 1.2e-06 57.0 124 34.7
unitig_27.g25235 Utricularia gibba HOM05D000832 ORTHO05D000982 1.2e-06 57.0 124 34.7
EL10Ac6g14528 Beta vulgaris HOM05D000832 ORTHO05D000982 1.6e-06 56.6 124 35.5
VMungo0720G2531 Vigna mungo HOM05D000832 ORTHO05D000982 1.6e-06 56.6 124 33.9
CARHR061570 Cardamine hirsuta HOM05D000832 ORTHO05D000982 2.0e-06 56.2 124 36.3
MD16G1050300 Malus domestica HOM05D000832 ORTHO05D000982 2.0e-06 56.2 124 35.5
PSO478G2608 Papaver somniferum HOM05D000832 ORTHO05D000982 2.7e-06 55.8 124 34.7
AUR62002943 Chenopodium quinoa HOM05D000832 ORTHO05D000982 4.5e-06 55.1 124 33.1
Glyma.10G205500 Glycine max HOM05D000832 ORTHO05D000982 4.5e-06 55.1 124 33.9
Ah.02g127340 Amaranthus hybridus HOM05D000832 ORTHO05D000982 5.9e-06 54.7 124 34.7
Sed0007358 Sechium edule HOM05D000832 ORTHO05D000982 5.9e-06 54.7 124 32.3
AUR62007752 Chenopodium quinoa HOM05D000832 ORTHO05D000982 7.7e-06 54.3 124 33.1


User provided reference genes

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