Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27345 Sequoiadendron giganteum HOM05D000570 ORTHO05D383910 1.0e-72 276.6 129 100.0
Zm00001eb278310 Zea mays HOM05D000021 ORTHO05D000010 7.3e-07 57.8 66 43.9
AL8G24400 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.6e-06 56.6 90 35.6
CiPaw.09G097400 Carya illinoinensis HOM05D000570 ORTHO05D001174 2.1e-06 56.2 50 50.0
MELO3C021727.2 Cucumis melo HOM05D000570 ORTHO05D001174 2.1e-06 56.2 50 50.0
CsaV3_1G046110 Cucumis sativus L. HOM05D000570 ORTHO05D001174 2.1e-06 56.2 50 50.0
THA.LOC104812980 Tarenaya hassleriana HOM05D000570 ORTHO05D001174 2.1e-06 56.2 50 46.0
EL10Ac8g20124 Beta vulgaris HOM05D000570 ORTHO05D001174 2.8e-06 55.8 54 46.3
CiPaw.10G074100 Carya illinoinensis HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
ClCG01G009630 Citrullus lanatus HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 50.0
Glyma.07G004600 Glycine max HOM05D000085 ORTHO05D000274 2.8e-06 55.8 52 48.1
Nn1g07254 Nelumbo nucifera HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
Potri.004G005301 Populus trichocarpa HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
Potri.011G010500 Populus trichocarpa HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
QL05p072009 Quercus lobata HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
Sabra04G0002700 Salix brachista HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
Sed0012913 Sechium edule HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
Sed0024112 Sechium edule HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
Sc05g0009430 Simmondsia chinensis HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
TAR626G0159 Trochodendron aralioides HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
GSVIVG01004806001 Vitis vinifera HOM05D000570 ORTHO05D001174 2.8e-06 55.8 50 48.0
ATR0686G163 Amborella trichopoda HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 48.0
Aqoxy1G03467 Aquilegia oxysepala HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 48.0
arahy.Tifrunner.gnm1.ann1.195J1V Arachis hypogaea HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
arahy.Tifrunner.gnm1.ann1.W4Y87I Arachis hypogaea HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
BcaC01g00766 Brassica carinata HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Ca_00690_v3 Cicer arietinum L. HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
COL.COLO4_31827 Corchorus olitorius HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
FvH4_3g01460 Fragaria vesca HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
FAN21G0433 Fragaria x ananassa HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
FAN25G3172 Fragaria x ananassa HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Glyma.09G007200 Glycine max HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Glyma.15G111600 Glycine max HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Gohir.A06G150700 Gossypium hirsutum HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Gohir.D06G156900 Gossypium hirsutum HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Gorai.010G183400 Gossypium raimondii HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Lalb_Chr15g0087741 Lupinus albus HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
MBI19_g45795_MAGBIO Magnolia biondii HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 48.0
MD05G1351900 Malus domestica HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Manes.16G003200 Manihot esculenta HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Phvul.006G146100 Phaseolus vulgaris HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Prupe.4G015700 Prunus persica HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
RcHm_v2.0_Chr5g0002301 Rosa chinensis HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
VMungo0540G1870 Vigna mungo HOM05D000570 ORTHO05D001174 3.6e-06 55.5 50 46.0
Ah.09g234550 Amaranthus hybridus HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 48.0
Cpa.g.sc152.51 Carica papaya HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 46.0
AUR62012753 Chenopodium quinoa HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 48.0
Lj6g0005851 Lotus japonicus HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 46.0
PGR004G0535 Punica granatum HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 46.0
Sabra01G0177900 Salix brachista HOM05D000166 ORTHO05D000812 4.7e-06 55.1 66 40.9
Sabra01G0178000 Salix brachista HOM05D000166 ORTHO05D000812 4.7e-06 55.1 66 40.9
Hund23438 Selenicereus undatus HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 48.0
Thecc.06G227500 Theobroma cacao HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 46.0
TWI38G1871 Tripterygium wilfordii HOM05D000570 ORTHO05D001174 4.7e-06 55.1 50 46.0
A08p15600 Brassica napus HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
C03p84050 Brassica napus HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
BolC1t01582H Brassica oleracea HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
BolC3t20684H Brassica oleracea HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
BraA08t33540Z Brassica rapa HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
Ciclev10014418m.g Citrus clementina HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
ECA238G3401 Erigeron canadensis HOM05D000021 ORTHO05D000010 6.2e-06 54.7 46 52.2
MD10G1326000 Malus domestica HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
Hund21434 Selenicereus undatus HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
TAR624G1309 Trochodendron aralioides HOM05D000570 ORTHO05D001174 6.2e-06 54.7 50 46.0
Atru.chr10.2275 Acer truncatum HOM05D000570 ORTHO05D001174 8.1e-06 54.3 50 46.0
CANSAT35G1898 Cannabis sativa HOM05D000031 ORTHO05D000030 8.1e-06 54.3 86 37.2
Carub.0008s1038 Capsella rubella HOM05D000021 ORTHO05D000010 8.1e-06 54.3 90 35.6
Gohir.A10G011100 Gossypium hirsutum HOM05D000570 ORTHO05D001174 8.1e-06 54.3 50 46.0
Gohir.D10G010700 Gossypium hirsutum HOM05D000570 ORTHO05D001174 8.1e-06 54.3 50 46.0
Gorai.011G011800 Gossypium raimondii HOM05D000570 ORTHO05D001174 8.1e-06 54.3 50 46.0
MD04G1041600 Malus domestica HOM05D000021 ORTHO05D000010 8.1e-06 54.3 84 34.5


User provided reference genes

Program Settings