Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 6.0e-78 294.3 168 100.0
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 2.4e-18 96.3 72 66.7
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 8.6e-16 87.8 91 49.5
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 9.5e-15 84.3 78 52.6
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 1.2e-14 84.0 93 45.2
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 3.6e-14 82.4 75 53.3
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 3.6e-14 82.4 95 47.4
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 4.7e-14 82.0 75 53.3
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 6.1e-14 81.6 122 50.8
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 8.0e-14 81.3 78 51.3
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 8.0e-14 81.3 80 52.5
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 1.0e-13 80.9 69 56.5
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.0e-13 80.9 79 59.5
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 1.0e-13 80.9 96 45.8
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 1.8e-13 80.1 73 53.4
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 1.8e-13 80.1 96 45.8
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.8e-13 80.1 77 51.9
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 3.0e-13 79.3 78 53.8
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 4.0e-13 79.0 92 48.9
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 4.0e-13 79.0 77 57.1
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 4.0e-13 79.0 73 57.5
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 5.2e-13 78.6 75 54.7
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 5.2e-13 78.6 82 52.4
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 5.2e-13 78.6 79 49.4
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 5.2e-13 78.6 75 52.0
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 6.8e-13 78.2 90 47.8
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 8.9e-13 77.8 109 40.4
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 1.2e-12 77.4 72 55.6
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.5e-12 77.0 105 41.9
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 2.0e-12 76.6 79 49.4
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 2.6e-12 76.3 79 48.1
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 3.4e-12 75.9 91 46.2
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 3.4e-12 75.9 78 52.6
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 4.4e-12 75.5 69 55.1
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 4.4e-12 75.5 93 45.2
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 4.4e-12 75.5 74 52.7
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 7.5e-12 74.7 75 57.3
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 9.8e-12 74.3 72 54.2
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 9.8e-12 74.3 72 52.8
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 9.8e-12 74.3 78 47.4
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 9.8e-12 74.3 78 48.7
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.3e-11 73.9 75 49.3
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 1.7e-11 73.6 76 51.3
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 2.2e-11 73.2 84 51.2
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 2.2e-11 73.2 77 50.6
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 2.9e-11 72.8 75 46.7
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 4.9e-11 72.0 78 51.3
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 4.9e-11 72.0 75 49.3
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 4.9e-11 72.0 63 54.0
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 8.3e-11 71.2 77 49.4
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 8.3e-11 71.2 79 49.4
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 8.3e-11 71.2 79 49.4
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 1.4e-10 70.5 70 55.7
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 1.8e-10 70.1 83 49.4
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 1.8e-10 70.1 75 48.0
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 2.4e-10 69.7 88 44.3
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 5.4e-10 68.6 72 50.0
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 9.2e-10 67.8 89 42.7
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 1.2e-09 67.4 75 48.0
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 3.5e-09 65.9 71 52.1
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 4.6e-09 65.5 78 42.3
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 4.6e-09 65.5 95 40.0
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 7.8e-09 64.7 69 49.3
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 7.8e-09 64.7 72 45.8
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 1.3e-08 63.9 78 42.3
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 1.3e-08 63.9 78 42.3
SEGI_24613 Sequoiadendron giganteum HOM05D002870 ORTHO05D003241 1.3e-08 63.9 44 70.5
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 1.7e-08 63.5 75 46.7
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 8.6e-08 61.2 75 41.3
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 8.6e-08 61.2 78 41.0
SEGI_10216 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 8.6e-08 61.2 39 76.9
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 1.1e-07 60.8 72 47.2
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 5.6e-07 58.5 86 39.5
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 2.8e-06 56.2 43 60.5
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 4.7e-06 55.5 78 43.6


User provided reference genes

Program Settings