Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 3.9e-72 274.6 131 100.0
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.2e-36 156.8 78 92.3
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 3.3e-23 112.1 69 68.1
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 4.3e-23 111.7 69 65.2
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 4.3e-23 111.7 69 68.1
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.6e-23 111.3 69 65.2
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.6e-23 111.3 69 65.2
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.3e-22 110.2 69 66.7
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 1.6e-22 109.8 69 65.2
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 2.8e-22 109.0 69 65.2
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.8e-22 109.0 69 65.2
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 2.8e-22 109.0 69 63.8
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 3.7e-22 108.6 69 65.2
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 4.8e-22 108.2 89 57.3
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 6.2e-22 107.8 68 63.2
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 8.1e-22 107.5 69 66.7
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 1.1e-21 107.1 69 63.8
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 1.8e-21 106.3 69 62.3
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 2.4e-21 105.9 69 62.3
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 2.4e-21 105.9 69 65.2
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 2.4e-21 105.9 69 65.2
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 3.1e-21 105.5 69 63.8
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 3.1e-21 105.5 68 60.3
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 3.1e-21 105.5 69 63.8
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 6.9e-21 104.4 69 62.3
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 9.0e-21 104.0 69 63.8
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 9.0e-21 104.0 69 65.2
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 1.2e-20 103.6 69 62.3
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 1.2e-20 103.6 69 62.3
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 1.2e-20 103.6 69 63.8
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 1.2e-20 103.6 69 62.3
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.5e-20 103.2 69 62.3
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.5e-20 103.2 69 62.3
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 1.5e-20 103.2 69 62.3
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.6e-20 102.4 69 59.4
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 2.6e-20 102.4 69 59.4
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 3.4e-20 102.1 69 59.4
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 3.4e-20 102.1 69 60.9
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 4.5e-20 101.7 69 60.9
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 4.5e-20 101.7 69 59.4
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 5.8e-20 101.3 69 59.4
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 7.6e-20 100.9 69 59.4
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 7.6e-20 100.9 69 56.5
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.0e-19 100.5 69 58.0
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 1.3e-19 100.1 70 64.3
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 1.7e-19 99.8 69 58.0
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 58.0
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 59.4
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 59.4
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 59.4
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 59.4
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 59.4
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 59.4
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 59.4
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 2.2e-19 99.4 69 55.1
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 2.9e-19 99.0 69 59.4
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 2.9e-19 99.0 69 59.4
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 3.8e-19 98.6 69 58.0
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 3.8e-19 98.6 69 58.0
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 3.8e-19 98.6 69 58.0
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 3.8e-19 98.6 69 58.0
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 3.8e-19 98.6 69 59.4
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 3.8e-19 98.6 69 58.0
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 4.9e-19 98.2 69 58.0
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 4.9e-19 98.2 69 59.4
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 4.9e-19 98.2 69 59.4
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 4.9e-19 98.2 69 59.4
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 6.5e-19 97.8 69 58.0
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 6.5e-19 97.8 69 58.0
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 6.5e-19 97.8 69 59.4
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 8.4e-19 97.4 69 58.0
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 8.4e-19 97.4 69 56.5
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 8.4e-19 97.4 69 58.0
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 8.4e-19 97.4 69 53.6
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.1e-18 97.1 69 58.0
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 1.1e-18 97.1 69 58.0
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 1.4e-18 96.7 69 62.3
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 1.4e-18 96.7 69 53.6
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 1.4e-18 96.7 69 56.5
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 1.9e-18 96.3 69 55.1
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 3.2e-18 95.5 69 58.0
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.2e-18 95.5 69 55.1
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.2e-18 95.5 69 55.1
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 4.2e-18 95.1 69 56.5
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.2e-18 95.1 69 56.5
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 5.5e-18 94.7 73 53.4
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 5.5e-18 94.7 69 52.2
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 5.5e-18 94.7 69 52.2
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 9.3e-18 94.0 66 60.6
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 1.2e-17 93.6 67 58.2
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.2e-17 93.6 69 52.2
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 1.6e-17 93.2 66 57.6
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 1.6e-17 93.2 66 57.6
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 1.6e-17 93.2 66 57.6
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.1e-17 92.8 62 58.1
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 2.1e-17 92.8 62 58.1
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.1e-17 92.8 62 58.1
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 2.1e-17 92.8 68 52.9
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 3.5e-17 92.0 69 52.2
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.6e-17 91.7 69 50.7
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 4.6e-17 91.7 69 58.0
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 7.9e-17 90.9 69 52.2
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 1.0e-16 90.5 70 58.6
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.3e-16 90.1 69 50.7
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 1.3e-16 90.1 60 60.0
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-16 90.1 69 55.1
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-16 90.1 69 55.1
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.3e-16 90.1 69 55.1
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.8e-16 89.7 69 55.1
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 2.3e-16 89.4 69 49.3
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 2.3e-16 89.4 69 49.3
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.1e-16 88.2 69 50.7
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 5.1e-16 88.2 69 50.7
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.5e-15 86.7 69 52.2
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 5.7e-15 84.7 54 59.3
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 2.1e-14 82.8 59 59.3
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.1e-13 80.5 47 61.7
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.8e-13 79.7 58 58.6
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.5e-12 76.6 70 47.1
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 2.0e-12 76.3 63 49.2
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 3.4e-12 75.5 46 60.9
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 4.6e-09 65.1 69 40.6
Cre13.g575701 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 3.3e-07 58.9 71 39.4
Cre03.g207100 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 9.7e-07 57.4 69 39.1


User provided reference genes

Program Settings