Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26992 Sequoiadendron giganteum HOM05D000087 ORTHO05D005735 9.4e-159 563.5 296 100.0
ATR0579G142 Amborella trichopoda HOM05D000087 ORTHO05D005735 5.3e-61 238.8 259 51.7
Aqoxy5G04397 Aquilegia oxysepala HOM05D000087 ORTHO05D005735 7.6e-60 235.0 259 50.2
TAR629G0355 Trochodendron aralioides HOM05D000087 ORTHO05D005735 1.7e-59 233.8 259 52.5
Nn3g18737 Nelumbo nucifera HOM05D000087 ORTHO05D005735 2.1e-57 226.9 217 55.3
GSVIVG01019707001 Vitis vinifera HOM05D000087 ORTHO05D005735 7.9e-57 224.9 220 53.2
PSO063G0654 Papaver somniferum HOM05D000087 ORTHO05D005735 5.1e-56 222.2 211 55.0
PSO782G2195 Papaver somniferum HOM05D000087 ORTHO05D005735 1.9e-55 220.3 208 53.8
Manes.17G015000 Manihot esculenta HOM05D000087 ORTHO05D005735 5.7e-55 218.8 263 49.8
HanXRQChr01g0016041 Helianthus annuus HOM05D000087 ORTHO05D005735 7.4e-55 218.4 258 48.1
Dinv11465 Davidia involucrata HOM05D000087 ORTHO05D005735 1.6e-54 217.2 217 54.4
Pp3c3_37190 Physcomitrium patens HOM05D000087 ORTHO05D005735 1.6e-54 217.2 267 47.9
FAN08G3226 Fragaria x ananassa HOM05D000087 ORTHO05D005735 3.7e-54 216.1 263 48.3
Sopen07g004380 Solanum pennellii HOM05D000087 ORTHO05D005735 3.7e-54 216.1 258 49.6
FAN04G3195 Fragaria x ananassa HOM05D000087 ORTHO05D005735 4.8e-54 215.7 263 47.9
FvH4_5g10170 Fragaria vesca HOM05D000087 ORTHO05D005735 8.2e-54 214.9 263 47.9
vmacro08519 Vaccinium macrocarpon HOM05D000087 ORTHO05D005735 8.2e-54 214.9 258 49.2
Solyc07g008450.3 Solanum lycopersicum HOM05D000087 ORTHO05D005735 1.4e-53 214.2 258 49.6
RcHm_v2.0_Chr7g0188131 Rosa chinensis HOM05D000087 ORTHO05D005735 1.8e-53 213.8 263 47.9
Prupe.5G137300 Prunus persica HOM05D000087 ORTHO05D005735 3.1e-53 213.0 258 47.7
AUR62039113 Chenopodium quinoa HOM05D000087 ORTHO05D005735 9.1e-53 211.5 267 44.9
Eucgr.D02539 Eucalyptus grandis HOM05D000087 ORTHO05D005735 1.2e-52 211.1 258 46.1
MD06G1127500 Malus domestica HOM05D000087 ORTHO05D005735 1.5e-52 210.7 264 47.0
ECA246G1365 Erigeron canadensis HOM05D000087 ORTHO05D005735 2.0e-52 210.3 258 48.1
Potri.001G454200 Populus trichocarpa HOM05D000087 ORTHO05D005735 2.6e-52 209.9 258 46.1
Sabra16G0307100 Salix brachista HOM05D000087 ORTHO05D005735 4.5e-52 209.1 258 46.1
QL02p026653 Quercus lobata HOM05D000087 ORTHO05D005735 5.9e-52 208.8 258 47.3
Nitab4.5_0007502g0010 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.0e-51 208.0 258 47.7
Mapoly0043s0141 Marchantia polymorpha HOM05D000087 ORTHO05D005735 1.3e-51 207.6 285 43.2
Nitab4.5_0000491g0190 Nicotiana tabacum HOM05D000087 ORTHO05D005735 1.7e-51 207.2 258 47.3
Psat5g111000 Pisum sativum HOM05D000087 ORTHO05D005735 2.9e-51 206.5 258 46.1
Lj2C147G10 Lonicera japonica HOM05D000087 ORTHO05D005735 3.8e-51 206.1 265 46.8
Lalb_Chr14g0362591 Lupinus albus HOM05D000087 ORTHO05D005735 3.8e-51 206.1 220 50.0
AT4G38120 Arabidopsis thaliana HOM05D000087 ORTHO05D005735 5.0e-51 205.7 255 47.1
Peaxi162Scf00046g00228 Petunia axillaris HOM05D000087 ORTHO05D005735 5.0e-51 205.7 258 48.8
Actinidia22240 Actinidia chinensis HOM05D000087 ORTHO05D005735 8.5e-51 204.9 261 47.1
Cc08_g17160 Coffea canephora HOM05D000087 ORTHO05D005735 1.9e-50 203.8 255 46.3
Medtr3g080640 Medicago truncatula HOM05D000087 ORTHO05D005735 1.9e-50 203.8 261 47.1
EL10Ac2g03880 Beta vulgaris HOM05D000087 ORTHO05D005735 3.2e-50 203.0 267 43.8
AL7G10010 Arabidopsis lyrata HOM05D000087 ORTHO05D005735 5.5e-50 202.2 255 46.7
CAN.G1548.2 Capsicum annuum HOM05D000087 ORTHO05D005735 5.5e-50 202.2 258 46.1
PGR031G2531 Punica granatum HOM05D000087 ORTHO05D005735 1.2e-49 201.1 255 45.5
Aa31LG6G16960 Aethionema arabicum HOM05D000087 ORTHO05D005735 1.6e-49 200.7 239 46.9
Phvul.011G167550 Phaseolus vulgaris HOM05D000087 ORTHO05D005735 3.6e-49 199.5 266 44.0
CiPaw.11G106200 Carya illinoinensis HOM05D000087 ORTHO05D005735 4.6e-49 199.1 217 50.2
AUR62009145 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.4e-48 197.6 267 43.4
Carub.0007s0001 Capsella rubella HOM05D000087 ORTHO05D005735 3.0e-48 196.4 255 46.3
TWI81G0850 Tripterygium wilfordii HOM05D000087 ORTHO05D005735 5.1e-48 195.7 258 45.3
A01p17150 Brassica napus HOM05D000087 ORTHO05D005735 6.7e-48 195.3 255 44.3
BraA01t01671Z Brassica rapa HOM05D000087 ORTHO05D005735 6.7e-48 195.3 255 44.3
Lj6g0001276 Lotus japonicus HOM05D000087 ORTHO05D005735 8.8e-48 194.9 262 45.8
CDE02G0276 Ceratophyllum demersum HOM05D000087 ORTHO05D005735 1.1e-47 194.5 262 43.9
Ciclev10018581m.g Citrus clementina HOM05D000087 ORTHO05D005735 1.1e-47 194.5 263 44.1
Thhalv10024269m.g Eutrema salsugineum HOM05D000087 ORTHO05D005735 2.6e-47 193.4 255 46.3
SGA_v2.0_scaffold123G33449 Striga asiatica HOM05D000087 ORTHO05D005735 7.4e-47 191.8 219 48.9
C01p21480 Brassica napus HOM05D000087 ORTHO05D005735 9.7e-47 191.4 255 43.5
BolC1t02068H Brassica oleracea HOM05D000087 ORTHO05D005735 9.7e-47 191.4 255 43.5
THA.LOC104806594 Tarenaya hassleriana HOM05D000087 ORTHO05D005735 2.8e-46 189.9 258 44.2
Sp7g37630 Schrenkiella parvula HOM05D000087 ORTHO05D005735 3.7e-46 189.5 255 44.3
MSTRG.22476 Avicennia marina HOM05D000087 ORTHO05D005735 1.4e-45 187.6 258 42.6
CANSAT64G2851 Cannabis sativa HOM05D000087 ORTHO05D005735 2.4e-45 186.8 258 43.8
Gohir.A08G107500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 6.9e-45 185.3 258 44.2
Migut.H02249 Erythranthe guttata HOM05D000087 ORTHO05D005735 2.0e-44 183.7 220 47.3
Gorai.004G127300 Gossypium raimondii HOM05D000087 ORTHO05D005735 2.0e-44 183.7 262 44.7
Sc01g0010950 Simmondsia chinensis HOM05D000087 ORTHO05D005735 2.0e-44 183.7 274 40.1
Gohir.D08G120500 Gossypium hirsutum HOM05D000087 ORTHO05D005735 2.6e-44 183.3 262 44.7
Rhsim02G0255700 Rhododendron simsii HOM05D000087 ORTHO05D005735 1.0e-43 181.4 368 35.1
Thecc.03G213700 Theobroma cacao HOM05D000087 ORTHO05D005735 1.0e-43 181.4 262 43.9
Duzib068G0232 Durio zibethinus HOM05D000087 ORTHO05D005735 9.4e-42 174.9 258 43.4
Sed0004639 Sechium edule HOM05D000087 ORTHO05D005735 9.4e-42 174.9 222 43.7
CsaV3_5G001350 Cucumis sativus L. HOM05D000087 ORTHO05D005735 2.1e-41 173.7 255 40.4
FAN18G4270 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.7e-41 173.3 255 42.7
Zm00001eb416210 Zea mays HOM05D000087 ORTHO05D005735 3.6e-41 172.9 258 39.5
Lsat_1_v5_gn_3_13301 Lactuca sativa HOM05D000087 ORTHO05D005735 6.1e-41 172.2 258 42.2
SMO367G1062 Selaginella moellendorffii HOM05D000087 ORTHO05D005735 1.0e-40 171.4 255 42.4
HPP92_028198 Vanilla planifolia HOM05D000087 ORTHO05D005735 3.9e-40 169.5 218 43.6
ClCG01G001230 Citrullus lanatus HOM05D000087 ORTHO05D005735 1.5e-39 167.5 255 39.6
Hma1.2p1_0198F.1_g085370 Hydrangea macrophylla HOM05D000087 ORTHO05D005735 1.5e-39 167.5 154 57.8
arahy.Tifrunner.gnm1.ann1.DH86LW Arachis hypogaea HOM05D000087 ORTHO05D005735 2.0e-39 167.2 254 41.7
CSS0029196 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D005735 4.8e-38 162.5 157 55.4
Hund03336 Selenicereus undatus HOM05D000087 ORTHO05D005735 1.1e-37 161.4 189 48.7
MBI04_g04806_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 1.4e-37 161.0 265 40.4
DCAR_010123 Daucus carota HOM05D000087 ORTHO05D005735 2.2e-35 153.7 255 38.0
Ca_16291_v3 Cicer arietinum L. HOM05D000087 ORTHO05D005735 3.2e-34 149.8 154 52.6
arahy.Tifrunner.gnm1.ann1.0XGN9Z Arachis hypogaea HOM05D000087 ORTHO05D005735 4.2e-34 149.4 158 53.2
MD14G1142900 Malus domestica HOM05D000087 ORTHO05D005735 4.0e-32 142.9 157 50.3
MELO3C005812.2 Cucumis melo HOM05D000087 ORTHO05D005735 2.7e-28 130.2 282 33.0
Cpa.g.sc37.117 Carica papaya HOM05D000087 ORTHO05D005735 3.5e-28 129.8 156 50.0
Cfa011874 Carpinus fangiana HOM05D000087 ORTHO05D005735 3.0e-24 116.7 258 34.5
FAN18G0494 Fragaria x ananassa HOM05D000087 ORTHO05D005735 2.2e-22 110.5 209 36.4
Glyma.06G181000 Glycine max HOM05D000087 ORTHO05D005735 2.8e-22 110.2 93 63.4
Haze_09232 Corylus avellana HOM05D000087 ORTHO05D005735 4.8e-22 109.4 211 36.5
AUR62009162 Chenopodium quinoa HOM05D000087 ORTHO05D005735 1.2e-20 104.8 227 34.8
Glyma.06G180700 Glycine max HOM05D000087 ORTHO05D005735 1.9e-18 97.4 168 36.9
RcHm_v2.0_Chr7g0188121 Rosa chinensis HOM05D000087 ORTHO05D005735 3.0e-16 90.1 71 66.2
Oeu019648.1 Olea europaea HOM05D000087 ORTHO05D005735 3.4e-15 86.7 78 57.7
CBR_g3175 Chara braunii HOM05D000087 ORTHO05D005735 2.8e-14 83.6 90 52.2
MBI04_g04802_MAGBIO Magnolia biondii HOM05D000087 ORTHO05D005735 7.0e-13 79.0 65 67.7
HPP92_008913 Vanilla planifolia HOM05D000087 ORTHO05D005735 5.6e-10 69.3 172 29.7
CARHR046160 Cardamine hirsuta HOM05D000087 ORTHO05D005735 1.0e-08 65.1 54 61.1
COL.COLO4_10863 Corchorus olitorius HOM05D000087 ORTHO05D005735 6.8e-08 62.4 134 32.8
SEGI_09954 Sequoiadendron giganteum HOM05D003581 ORTHO05D004332 8.3e-06 55.5 40 57.5


User provided reference genes

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