Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26918 Sequoiadendron giganteum HOM05D012287 ORTHO05D000001 1.2e-138 496.5 246 100.0
SEGI_30832 Sequoiadendron giganteum HOM05D000038 ORTHO05D026104 3.8e-20 102.8 65 75.4
SEGI_02381 Sequoiadendron giganteum HOM05D003001 ORTHO05D026104 1.4e-19 100.9 66 74.2
SEGI_15687 Sequoiadendron giganteum HOM05D001113 ORTHO05D000968 4.3e-16 89.4 54 81.5
SEGI_09407 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.4e-12 75.5 87 43.7
SEGI_24344 Sequoiadendron giganteum HOM05D001976 ORTHO05D001960 1.9e-11 73.9 41 85.4
SEGI_35443 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 5.5e-11 72.4 63 49.2
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-10 68.6 65 52.3
SEGI_01340 Sequoiadendron giganteum HOM05D012287 ORTHO05D000001 1.0e-09 68.2 58 51.7
SEGI_17497 Sequoiadendron giganteum HOM05D012287 ORTHO05D000001 1.0e-09 68.2 58 51.7
CSS0000779 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 1.3e-09 67.8 65 52.3
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-09 67.8 65 52.3
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-09 66.2 65 50.8
SEGI_27320 Sequoiadendron giganteum HOM05D000046 ORTHO05D000001 1.1e-08 64.7 54 55.6
SEGI_17827 Sequoiadendron giganteum HOM05D000012 ORTHO05D002455 1.5e-08 64.3 61 52.5
Nn1g08550 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.5e-08 63.5 67 46.3
SEGI_32204 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.4e-08 62.0 64 45.3
Atru.chr2.1201 Acer truncatum HOM05D000002 ORTHO05D000001 9.6e-08 61.6 61 45.9
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 2.8e-07 60.1 65 43.1
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-07 59.7 59 49.2
CSS0036683 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-07 59.7 62 45.2
PSO170G2828 Papaver somniferum HOM05D000002 ORTHO05D000001 4.8e-07 59.3 65 49.2
SHI00983 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-07 58.9 85 34.1
TPR.G9293 Trifolium pratense HOM05D000002 ORTHO05D000001 6.2e-07 58.9 79 40.5
PSO478G3780 Papaver somniferum HOM05D000002 ORTHO05D000001 8.1e-07 58.5 62 40.3
PSO063G2322 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-06 58.2 65 49.2
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 58.2 66 40.9
SHI27923 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 58.2 66 40.9
SHI29412 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 58.2 66 40.9
PSO063G0686 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-06 57.4 65 47.7
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.4 69 34.8
SHI55107 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 57.4 67 38.8
MD11G1074500 Malus domestica HOM05D000002 ORTHO05D000001 2.4e-06 57.0 65 43.1
SHI01787 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 66 42.4
SHI03313 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 66 39.4
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 57.0 66 39.4
CSS0002962 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-06 56.6 61 42.6
Hma1.2p1_0775F.1_g216430 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-06 56.6 64 42.2
PSO063G0565 Papaver somniferum HOM05D000002 ORTHO05D000001 3.1e-06 56.6 65 47.7
SHI00045 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-06 56.6 66 39.4
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-06 56.6 66 39.4
SHI44612 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-06 56.6 66 39.4
CSS0031459 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-06 56.2 82 36.6
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 56.2 66 39.4
SHI25860 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 56.2 67 38.8
SHI37456 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-06 56.2 66 39.4
GSVIVG01020902001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.0e-06 56.2 65 38.5
PSO832G3521 Papaver somniferum HOM05D000002 ORTHO05D000001 5.3e-06 55.8 65 47.7
SHI29359 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-06 55.8 66 39.4
SHI44368 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-06 55.8 66 39.4
PSO455G0019 Papaver somniferum HOM05D000002 ORTHO05D000001 6.9e-06 55.5 65 41.5
SHI07166 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-06 55.5 62 38.7
SEGI_00612 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.9e-06 55.5 73 39.7
SEGI_06125 Sequoiadendron giganteum HOM05D000798 ORTHO05D000659 6.9e-06 55.5 61 44.3
PSO170G3112 Papaver somniferum HOM05D000002 ORTHO05D000001 9.0e-06 55.1 65 47.7
PSO384G3217 Papaver somniferum HOM05D000002 ORTHO05D000001 9.0e-06 55.1 56 48.2
PSO782G1703 Papaver somniferum HOM05D000002 ORTHO05D000001 9.0e-06 55.1 65 46.2
SHI28427 Sapria himalayana HOM05D000002 ORTHO05D000001 9.0e-06 55.1 65 38.5
Sopen08g006540 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 55.1 69 37.7


User provided reference genes

Program Settings