Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26852 Sequoiadendron giganteum HOM05D000599 ORTHO05D006883 7.1e-40 166.8 82 100.0
Mapoly0049s0129 Marchantia polymorpha HOM05D000599 ORTHO05D006883 1.2e-18 96.3 61 72.1
TAR627G0901 Trochodendron aralioides HOM05D000599 ORTHO05D006883 4.9e-17 90.9 61 60.7
Pp3c14_1550 Physcomitrium patens HOM05D000599 ORTHO05D006883 2.5e-16 88.6 60 68.3
RcHm_v2.0_Chr5g0031931 Rosa chinensis HOM05D000599 ORTHO05D006883 9.3e-16 86.7 61 62.3
FAN11G3855 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-15 86.3 61 60.7
FAN16G1937 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-15 86.3 61 60.7
FAN21G2449 Fragaria x ananassa HOM05D000599 ORTHO05D006883 1.2e-15 86.3 61 60.7
MD03G1236200 Malus domestica HOM05D000599 ORTHO05D006883 1.2e-15 86.3 61 59.0
Potri.001G373200 Populus trichocarpa HOM05D000599 ORTHO05D006883 1.6e-15 85.9 61 59.0
ECA234G4269 Erigeron canadensis HOM05D001613 ORTHO05D006883 2.1e-15 85.5 61 55.7
MD11G1257100 Malus domestica HOM05D000599 ORTHO05D006883 2.1e-15 85.5 61 59.0
Sabra16G0245600 Salix brachista HOM05D000599 ORTHO05D006883 2.1e-15 85.5 61 59.0
TWI38G1662 Tripterygium wilfordii HOM05D000599 ORTHO05D006883 2.1e-15 85.5 61 55.7
Cfa020625 Carpinus fangiana HOM05D000599 ORTHO05D006883 2.7e-15 85.1 61 60.7
Haze_09378 Corylus avellana HOM05D000599 ORTHO05D006883 2.7e-15 85.1 62 59.7
Os01g0753100 Oryza sativa ssp. japonica HOM05D000599 ORTHO05D006883 2.7e-15 85.1 61 60.7
vmacro11900 Vaccinium macrocarpon HOM05D000599 ORTHO05D006883 2.7e-15 85.1 61 57.4
ATR0602G106 Amborella trichopoda HOM05D000599 ORTHO05D006883 3.5e-15 84.7 79 51.9
Oeu025350.3 Olea europaea HOM05D000599 ORTHO05D006883 3.5e-15 84.7 60 53.3
RcHm_v2.0_Chr5g0032001 Rosa chinensis HOM05D000599 ORTHO05D006883 3.5e-15 84.7 61 60.7
Ah.04g164460 Amaranthus hybridus HOM05D000599 ORTHO05D006883 4.6e-15 84.3 61 60.7
CiPaw.12G116700 Carya illinoinensis HOM05D000599 ORTHO05D006883 4.6e-15 84.3 61 55.7
Lj1A836G33 Lonicera japonica HOM05D000599 ORTHO05D006883 6.0e-15 84.0 61 57.4
Nitab4.5_0003033g0020 Nicotiana tabacum HOM05D000599 ORTHO05D006883 6.0e-15 84.0 61 59.0
HPP92_021507 Vanilla planifolia HOM05D000599 ORTHO05D006883 6.0e-15 84.0 61 57.4
Nitab4.5_0000332g0200 Nicotiana tabacum HOM05D000599 ORTHO05D006883 7.9e-15 83.6 61 59.0
CSS0008026 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.0e-14 83.2 61 57.4
Cpa.g.sc80.13 Carica papaya HOM05D000599 ORTHO05D006883 1.3e-14 82.8 61 59.0
Dinv20217 Davidia involucrata HOM05D000599 ORTHO05D006883 1.3e-14 82.8 61 59.0
PSO832G3682 Papaver somniferum HOM05D000599 ORTHO05D006883 1.3e-14 82.8 62 58.1
Sed0014270 Sechium edule HOM05D000599 ORTHO05D006883 1.3e-14 82.8 61 57.4
CSS0043173 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.8e-14 82.4 61 57.4
Lsat_1_v5_gn_5_128780 Lactuca sativa HOM05D000599 ORTHO05D006883 1.8e-14 82.4 57 54.4
Prupe.4G173000 Prunus persica HOM05D000599 ORTHO05D006883 1.8e-14 82.4 61 59.0
SGA_v2.0_scaffold73G24221 Striga asiatica HOM05D000599 ORTHO05D006883 1.8e-14 82.4 61 57.4
AagrBONN_evm.TU.Sc2ySwM_368.514 Anthoceros agrestis HOM05D000599 ORTHO05D006883 2.3e-14 82.0 57 66.7
BcaB06g29534 Brassica carinata HOM05D000599 ORTHO05D006883 2.3e-14 82.0 59 61.0
A05p34360 Brassica napus HOM05D000599 ORTHO05D006883 2.3e-14 82.0 59 61.0
C05p52130 Brassica napus HOM05D000599 ORTHO05D006883 2.3e-14 82.0 59 61.0
BolC5t33898H Brassica oleracea HOM05D000599 ORTHO05D006883 2.3e-14 82.0 59 61.0
BraA05t22256Z Brassica rapa HOM05D000599 ORTHO05D006883 2.3e-14 82.0 59 61.0
Sp3g13290 Schrenkiella parvula HOM05D000599 ORTHO05D006883 2.3e-14 82.0 58 63.8
THA.LOC104810454 Tarenaya hassleriana HOM05D000599 ORTHO05D006883 2.3e-14 82.0 59 61.0
C03p47500 Brassica napus HOM05D000599 ORTHO05D006883 3.9e-14 81.3 59 61.0
BolC3t17014H Brassica oleracea HOM05D000599 ORTHO05D006883 3.9e-14 81.3 59 61.0
Thhalv10020985m.g Eutrema salsugineum HOM05D000599 ORTHO05D006883 3.9e-14 81.3 59 61.0
Peaxi162Scf00000g00284 Petunia axillaris HOM05D000599 ORTHO05D006883 3.9e-14 81.3 61 54.1
PSO210G4318 Papaver somniferum HOM05D000599 ORTHO05D006883 5.1e-14 80.9 62 56.5
SMO116G0426 Selaginella moellendorffii HOM05D000599 ORTHO05D006883 5.1e-14 80.9 60 63.3
Hund22810 Selenicereus undatus HOM05D000599 ORTHO05D006883 5.1e-14 80.9 61 52.5
PGSC0003DMG400015372 Solanum tuberosum HOM05D000599 ORTHO05D006883 5.1e-14 80.9 61 54.1
CAN.G329.7 Capsicum annuum HOM05D000599 ORTHO05D006883 6.7e-14 80.5 61 54.1
CsaV3_3G019590 Cucumis sativus L. HOM05D000599 ORTHO05D006883 6.7e-14 80.5 61 57.4
HanXRQChr10g0302461 Helianthus annuus HOM05D000599 ORTHO05D006883 6.7e-14 80.5 61 54.1
Solyc12g014050.2 Solanum lycopersicum HOM05D000599 ORTHO05D006883 6.7e-14 80.5 61 54.1
Aqoxy4G00576 Aquilegia oxysepala HOM05D000599 ORTHO05D006883 8.7e-14 80.1 61 55.7
Manes.12G158400 Manihot esculenta HOM05D000599 ORTHO05D006883 8.7e-14 80.1 60 53.3
Sopen12g005790 Solanum pennellii HOM05D000599 ORTHO05D006883 8.7e-14 80.1 61 54.1
A03p39150 Brassica napus HOM05D000599 ORTHO05D006883 1.1e-13 79.7 59 59.3
BraA03t13064Z Brassica rapa HOM05D000599 ORTHO05D006883 1.1e-13 79.7 59 59.3
AT3G15090 Arabidopsis thaliana HOM05D000599 ORTHO05D006883 1.5e-13 79.3 58 60.3
CARHR090050 Cardamine hirsuta HOM05D000599 ORTHO05D006883 1.5e-13 79.3 58 60.3
QL08p023388 Quercus lobata HOM05D000599 ORTHO05D006883 1.9e-13 79.0 60 53.3
Sc16g0007340 Simmondsia chinensis HOM05D000599 ORTHO05D006883 1.9e-13 79.0 61 50.8
ClCG05G009200 Citrullus lanatus HOM05D000599 ORTHO05D006883 2.5e-13 78.6 61 55.7
Eucgr.F01180 Eucalyptus grandis HOM05D000599 ORTHO05D006883 2.5e-13 78.6 79 49.4
Rhsim06G0203600 Rhododendron simsii HOM05D000599 ORTHO05D006883 2.5e-13 78.6 57 57.9
CANSAT35G1865 Cannabis sativa HOM05D000599 ORTHO05D006883 3.3e-13 78.2 61 57.4
Carub.0003s1473 Capsella rubella HOM05D000599 ORTHO05D006883 3.3e-13 78.2 58 58.6
AUR62019503 Chenopodium quinoa HOM05D000599 ORTHO05D006883 3.3e-13 78.2 61 55.7
MBI06_g45594_MAGBIO Magnolia biondii HOM05D000599 ORTHO05D006883 3.3e-13 78.2 61 52.5
GSVIVG01014259001 Vitis vinifera HOM05D000599 ORTHO05D006883 3.3e-13 78.2 61 55.7
EL10Ac4g08277 Beta vulgaris HOM05D000599 ORTHO05D006883 4.3e-13 77.8 60 56.7
Cc05_g11570 Coffea canephora HOM05D000599 ORTHO05D006883 5.7e-13 77.4 61 55.7
DCAR_019576 Daucus carota HOM05D000599 ORTHO05D006883 5.7e-13 77.4 60 55.0
Migut.M00767 Erythranthe guttata HOM05D000599 ORTHO05D006883 5.7e-13 77.4 61 54.1
AUR62036135 Chenopodium quinoa HOM05D000599 ORTHO05D006883 9.6e-13 76.6 61 54.1
Glyma.13G272900 Glycine max HOM05D000599 ORTHO05D006883 9.6e-13 76.6 61 55.7
Aa31LG8G2300 Aethionema arabicum HOM05D000599 ORTHO05D006883 1.3e-12 76.3 58 58.6
AL3G27440 Arabidopsis lyrata HOM05D000599 ORTHO05D006883 1.3e-12 76.3 58 58.6
RcHm_v2.0_Chr5g0032041 Rosa chinensis HOM05D000599 ORTHO05D006883 1.3e-12 76.3 71 49.3
Zm00001eb152950 Zea mays HOM05D000599 ORTHO05D006883 1.3e-12 76.3 56 57.1
arahy.Tifrunner.gnm1.ann1.10FGX8 Arachis hypogaea HOM05D000599 ORTHO05D006883 1.6e-12 75.9 61 54.1
arahy.Tifrunner.gnm1.ann1.PD8C8E Arachis hypogaea HOM05D000599 ORTHO05D006883 1.6e-12 75.9 61 54.1
CiPaw.11G166300 Carya illinoinensis HOM05D000599 ORTHO05D006883 1.6e-12 75.9 53 56.6
DCAR_021003 Daucus carota HOM05D000599 ORTHO05D006883 1.6e-12 75.9 61 54.1
Duzib213G1012 Durio zibethinus HOM05D000599 ORTHO05D006883 1.6e-12 75.9 61 55.7
Atru.chr2.2379 Acer truncatum HOM05D000599 ORTHO05D006883 2.8e-12 75.1 61 54.1
Lalb_Chr25g0286171 Lupinus albus HOM05D000599 ORTHO05D006883 2.8e-12 75.1 61 52.5
Ca_04028_v3 Cicer arietinum L. HOM05D000599 ORTHO05D006883 3.7e-12 74.7 61 52.5
TPR.G22064 Trifolium pratense HOM05D000599 ORTHO05D006883 3.7e-12 74.7 61 50.8
Lj3g0008187 Lotus japonicus HOM05D000599 ORTHO05D006883 4.8e-12 74.3 65 47.7
Medtr2g078520 Medicago truncatula HOM05D000599 ORTHO05D006883 4.8e-12 74.3 61 50.8
Oeu007447.1 Olea europaea HOM05D008214 ORTHO05D006883 4.8e-12 74.3 60 50.0
PGR083G0548 Punica granatum HOM05D000599 ORTHO05D006883 4.8e-12 74.3 61 52.5
SalBow7G1016 Salvia bowleyana HOM05D000599 ORTHO05D006883 4.8e-12 74.3 61 50.8
Ciclev10008721m.g Citrus clementina HOM05D000599 ORTHO05D006883 1.1e-11 73.2 61 54.1
Gohir.A01G060100 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.1e-11 73.2 61 54.1
Gohir.D01G046600 Gossypium hirsutum HOM05D000599 ORTHO05D006883 1.1e-11 73.2 61 54.1
Gorai.002G066100 Gossypium raimondii HOM05D000599 ORTHO05D006883 1.1e-11 73.2 61 54.1
Phvul.005G069200 Phaseolus vulgaris HOM05D000599 ORTHO05D006883 1.1e-11 73.2 61 47.5
Thecc.07G100100 Theobroma cacao HOM05D000599 ORTHO05D006883 1.1e-11 73.2 61 54.1
VMungo1080G1405 Vigna mungo HOM05D000599 ORTHO05D006883 1.1e-11 73.2 61 49.2
Glyma.12G227400 Glycine max HOM05D000599 ORTHO05D006883 1.4e-11 72.8 61 50.8
MELO3C019391.2 Cucumis melo HOM05D000599 ORTHO05D006883 2.4e-11 72.0 53 56.6
BcaC01g03898 Brassica carinata HOM05D000599 ORTHO05D006883 3.1e-11 71.6 49 63.3
Psat5g241360 Pisum sativum HOM05D000599 ORTHO05D006883 3.1e-11 71.6 61 49.2
Duzib170G0842 Durio zibethinus HOM05D000599 ORTHO05D006883 3.8e-09 64.7 51 52.9
Nn1g04277 Nelumbo nucifera HOM05D000599 ORTHO05D006883 1.1e-08 63.2 38 68.4
AUR62019501 Chenopodium quinoa HOM05D000223 ORTHO05D000736 1.4e-08 62.8 52 53.8
unitig_52.g17400 Utricularia gibba HOM05D000599 ORTHO05D006883 4.2e-08 61.2 37 70.3
CSS0039326 Camellia sinensis var. sinensis HOM05D000599 ORTHO05D006883 1.8e-06 55.8 58 39.7


User provided reference genes

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