Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 4.9e-61 237.7 123 100.0
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 4.1e-15 85.1 100 49.0
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 9.1e-15 84.0 102 50.0
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 7.7e-14 80.9 100 47.0
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.3e-13 80.1 100 45.0
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 1.7e-13 79.7 101 46.5
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 5.0e-13 78.2 103 46.6
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 5.0e-13 78.2 104 47.1
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 8.5e-13 77.4 108 43.5
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.1e-12 77.0 104 46.2
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 1.4e-12 76.6 104 39.4
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 1.9e-12 76.3 110 42.7
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 2.5e-12 75.9 100 43.0
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 2.5e-12 75.9 104 41.3
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 3.2e-12 75.5 99 45.5
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 3.2e-12 75.5 102 44.1
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 3.2e-12 75.5 100 44.0
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 2.1e-11 72.8 104 38.5
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.1e-11 72.8 103 41.7
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 2.1e-11 72.8 100 43.0
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 2.1e-11 72.8 97 40.2
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.1e-11 72.8 100 45.0
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 2.1e-11 72.8 100 42.0
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 3.6e-11 72.0 101 42.6
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 4.7e-11 71.6 101 41.6
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 3.0e-10 68.9 110 39.1
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 3.0e-10 68.9 100 43.0
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.0e-10 68.9 104 40.4
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 3.9e-10 68.6 104 38.5
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 5.1e-10 68.2 105 41.0
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 5.1e-10 68.2 104 37.5
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 5.1e-10 68.2 102 44.1
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.7e-10 67.8 104 42.3
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 8.8e-10 67.4 99 38.4
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.1e-09 67.0 101 39.6
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 1.5e-09 66.6 104 38.5
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 1.5e-09 66.6 99 41.4
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 2.0e-09 66.2 103 37.9
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.0e-09 66.2 101 39.6
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.6e-09 65.9 99 37.4
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 2.6e-09 65.9 111 39.6
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 2.6e-09 65.9 104 35.6
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.6e-09 65.9 104 38.5
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 4.4e-09 65.1 101 42.6
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 4.4e-09 65.1 101 35.6
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 4.4e-09 65.1 101 35.6
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 4.4e-09 65.1 98 40.8
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 4.4e-09 65.1 104 38.5
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 4.4e-09 65.1 104 38.5
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 9.7e-09 63.9 107 36.4
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 9.7e-09 63.9 105 35.2
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 1.3e-08 63.5 101 34.7
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 1.7e-08 63.2 108 38.9
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 2.8e-08 62.4 104 38.5
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 2.8e-08 62.4 119 37.8
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 2.8e-08 62.4 99 37.4
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 3.7e-08 62.0 86 41.9
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 3.7e-08 62.0 104 38.5
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.7e-08 62.0 104 38.5
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 3.7e-08 62.0 104 38.5
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 4.8e-08 61.6 99 33.3
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 4.8e-08 61.6 80 42.5
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.3e-08 61.2 104 37.5
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 8.2e-08 60.8 107 36.4
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 8.2e-08 60.8 97 38.1
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.1e-07 60.5 99 33.3
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 1.1e-07 60.5 99 33.3
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 1.4e-07 60.1 107 36.4
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 1.8e-07 59.7 99 33.3
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.8e-07 59.7 102 40.2
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 2.4e-07 59.3 103 36.9
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 5.3e-07 58.2 99 32.3
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 5.3e-07 58.2 92 42.4
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 9.1e-07 57.4 100 34.0
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 1.2e-06 57.0 80 41.2
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.2e-06 57.0 107 34.6
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 2.0e-06 56.2 92 43.5
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.0e-06 56.2 105 32.4
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 2.6e-06 55.8 107 34.6
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 3.4e-06 55.5 80 42.5
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 4.5e-06 55.1 100 35.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 4.5e-06 55.1 107 35.5
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 5.9e-06 54.7 72 45.8
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 5.9e-06 54.7 105 32.4
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 5.9e-06 54.7 105 36.2


User provided reference genes

Program Settings