Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 1.2e-180 636.3 312 100.0
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 9.1e-104 380.9 299 57.9
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 6.5e-102 374.8 298 56.4
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 3.6e-100 369.0 298 55.7
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 6.1e-100 368.2 305 55.4
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.2e-98 364.0 297 57.6
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 1.5e-98 363.6 306 53.6
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 5.7e-98 361.7 297 56.6
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 9.7e-98 360.9 295 53.9
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 9.7e-98 360.9 301 55.1
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 1.3e-97 360.5 302 54.0
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 2.2e-97 359.8 298 55.7
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 6.3e-97 358.2 299 56.9
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.1e-96 357.5 301 54.2
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.1e-96 357.5 305 55.1
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.4e-96 357.1 305 54.8
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 4.1e-96 355.5 291 57.7
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 4.1e-96 355.5 294 54.8
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 7.0e-96 354.8 298 55.7
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 7.7e-95 351.3 291 56.7
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 7.7e-95 351.3 292 57.2
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 7.7e-95 351.3 305 52.8
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 1.0e-94 350.9 302 50.3
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.3e-94 350.5 294 53.4
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 1.3e-94 350.5 299 50.8
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 1.7e-94 350.1 314 53.8
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 2.9e-94 349.4 302 53.0
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 5.0e-94 348.6 296 55.1
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 5.0e-94 348.6 302 50.3
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 8.5e-94 347.8 305 55.1
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 8.5e-94 347.8 305 55.1
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 8.5e-94 347.8 298 53.0
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.5e-93 346.3 300 53.7
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 2.5e-93 346.3 288 55.6
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 3.2e-93 345.9 287 56.8
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 3.2e-93 345.9 305 52.8
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 1.6e-92 343.6 288 56.6
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 2.1e-92 343.2 280 57.1
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 1.0e-91 340.9 301 53.5
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.4e-91 340.5 297 52.9
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 3.0e-91 339.3 305 52.8
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 6.8e-91 338.2 294 53.4
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 2.6e-90 336.3 280 55.4
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 4.4e-90 335.5 293 53.2
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 9.8e-90 334.3 299 52.5
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 8.3e-89 331.3 298 51.0
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.4e-88 330.5 289 51.2
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.4e-88 330.5 300 49.3
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 2.4e-88 329.7 298 46.3
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 4.1e-88 328.9 288 52.4
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 2.0e-87 326.6 297 50.5
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 2.7e-87 326.2 298 53.0
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 2.7e-87 326.2 307 50.2
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 3.5e-87 325.9 297 49.5
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 6.5e-86 321.6 280 48.9
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 6.5e-86 321.6 281 53.0
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 1.1e-85 320.9 256 57.0
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 1.9e-85 320.1 277 55.2
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.5e-85 319.7 299 47.5
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 4.2e-85 318.9 299 49.2
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 7.2e-85 318.2 293 50.9
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 1.2e-84 317.4 294 48.6
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 6.1e-84 315.1 299 47.2
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 1.8e-83 313.5 289 47.4
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.2e-83 312.0 299 46.8
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 8.8e-83 311.2 298 49.3
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 5.7e-82 308.5 301 48.8
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 7.5e-82 308.1 291 49.1
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 1.7e-81 307.0 302 49.7
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 8.3e-81 304.7 294 49.3
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 3.1e-80 302.8 443 37.0
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.5e-79 299.3 282 51.4
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 4.5e-79 298.9 252 54.8
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 2.5e-77 293.1 298 43.3
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 2.5e-77 293.1 320 43.4
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 3.0e-75 286.2 260 46.9
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 3.4e-74 282.7 282 45.0
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 7.5e-74 281.6 240 52.9
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 6.4e-73 278.5 298 45.0
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 1.4e-72 277.3 235 52.8
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 9.2e-72 274.6 391 36.1
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.5e-71 272.7 309 44.7
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 7.3e-69 265.0 251 50.6
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 7.3e-69 265.0 235 48.9
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 6.8e-67 258.5 250 47.2
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.3e-65 254.2 340 40.3
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 2.9e-65 253.1 338 42.9
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 9.2e-64 248.1 208 55.3
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.2e-63 247.7 249 47.8
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 8.6e-62 241.5 301 41.5
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 1.7e-57 227.3 215 51.2
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.9e-56 223.8 202 50.5
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 1.5e-53 214.2 205 50.2
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.9e-53 213.8 174 55.2
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 2.0e-50 203.8 195 50.3
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.9e-48 197.2 195 49.2
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 4.3e-45 186.0 143 56.6
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 3.1e-43 179.9 281 37.7
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 5.8e-42 175.6 145 54.5
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 4.9e-41 172.6 142 52.8
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 6.4e-41 172.2 302 35.4
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 3.5e-39 166.4 225 36.0
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 3.0e-38 163.3 294 31.6
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 4.0e-35 152.9 410 28.0
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 5.3e-35 152.5 123 55.3
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 6.9e-35 152.1 122 58.2
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.7e-31 140.2 100 58.0
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.6e-28 131.0 110 50.0
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 8.1e-28 128.6 84 60.7
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 2.4e-27 127.1 270 30.4
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 7.6e-26 122.1 77 66.2
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 1.9e-24 117.5 96 53.1
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 4.6e-23 112.8 88 55.7
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 7.9e-23 112.1 141 43.3
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 2.8e-20 103.6 337 26.1
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 9.0e-19 98.6 295 29.2
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 7.4e-13 79.0 61 54.1
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 7.2e-08 62.4 43 58.1
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 1.3e-06 58.2 50 54.0
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 5.1e-06 56.2 45 48.9


User provided reference genes

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