Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26710 Sequoiadendron giganteum HOM05D004567 ORTHO05D005726 2.8e-82 308.5 154 100.0
Mapoly0026s0045 Marchantia polymorpha HOM05D004567 ORTHO05D005726 4.2e-17 92.0 124 41.1
GSVIVG01012041001 Vitis vinifera HOM05D004567 ORTHO05D005726 7.9e-16 87.8 104 40.4
FAN03G0634 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.1e-14 84.0 102 43.1
FAN10G2749 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.1e-14 84.0 102 43.1
FAN10G3814 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.1e-14 84.0 102 43.1
FAN11G1323 Fragaria x ananassa HOM05D004567 ORTHO05D005726 1.9e-14 83.2 80 51.2
FvH4_7g08600 Fragaria vesca HOM05D004567 ORTHO05D005726 2.5e-14 82.8 102 43.1
FAN01G2992 Fragaria x ananassa HOM05D004567 ORTHO05D005726 5.6e-14 81.6 102 42.2
Nn4g22147 Nelumbo nucifera HOM05D004567 ORTHO05D005726 7.3e-14 81.3 140 35.0
CiPaw.14G015900 Carya illinoinensis HOM05D004567 ORTHO05D005726 9.6e-14 80.9 129 36.4
Sabra07G0059700 Salix brachista HOM05D004567 ORTHO05D005726 1.3e-13 80.5 109 45.0
CDE08G0826 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 1.6e-13 80.1 97 48.5
CDE02G2175 Ceratophyllum demersum HOM05D004567 ORTHO05D005726 2.1e-13 79.7 98 43.9
FAN06G1075 Fragaria x ananassa HOM05D004567 ORTHO05D005726 2.1e-13 79.7 102 42.2
Potri.007G071000 Populus trichocarpa HOM05D004567 ORTHO05D005726 2.1e-13 79.7 80 51.2
RcHm_v2.0_Chr1g0343571 Rosa chinensis HOM05D004567 ORTHO05D005726 2.1e-13 79.7 122 39.3
ATR0605G273 Amborella trichopoda HOM05D004567 ORTHO05D005726 3.6e-13 79.0 86 44.2
MBI01_g01364_MAGBIO Magnolia biondii HOM05D004567 ORTHO05D005726 3.6e-13 79.0 141 35.5
TAR369G0463 Trochodendron aralioides HOM05D004567 ORTHO05D005726 3.6e-13 79.0 143 34.3
Dinv41785 Davidia involucrata HOM05D004567 ORTHO05D005726 4.8e-13 78.6 88 42.0
Nn3g16289 Nelumbo nucifera HOM05D004567 ORTHO05D005726 8.1e-13 77.8 102 43.1
HPP92_002998 Vanilla planifolia HOM05D004567 ORTHO05D005726 8.1e-13 77.8 137 32.8
CANSAT25G2547 Cannabis sativa HOM05D004567 ORTHO05D005726 1.4e-12 77.0 133 36.1
Gohir.A04G107700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 1.8e-12 76.6 128 37.5
Ciclev10031151m.g Citrus clementina HOM05D004567 ORTHO05D005726 2.4e-12 76.3 87 48.3
Haze_02919 Corylus avellana HOM05D004567 ORTHO05D005726 2.4e-12 76.3 128 35.9
Gohir.D04G147500 Gossypium hirsutum HOM05D004567 ORTHO05D005726 2.4e-12 76.3 128 37.5
Gorai.012G133500 Gossypium raimondii HOM05D004567 ORTHO05D005726 2.4e-12 76.3 128 37.5
Pp3c20_6950 Physcomitrium patens HOM05D004567 ORTHO05D005726 2.4e-12 76.3 83 43.4
Zm00001eb066810 Zea mays HOM05D004567 ORTHO05D005726 2.4e-12 76.3 133 35.3
Lalb_Chr13g0290871 Lupinus albus HOM05D004567 ORTHO05D005726 3.1e-12 75.9 102 41.2
Actinidia24396 Actinidia chinensis HOM05D004567 ORTHO05D005726 5.3e-12 75.1 110 38.2
Pp3c23_19720 Physcomitrium patens HOM05D004567 ORTHO05D005726 5.3e-12 75.1 80 47.5
Cfa022165 Carpinus fangiana HOM05D004567 ORTHO05D005726 9.0e-12 74.3 101 39.6
MD07G1086800 Malus domestica HOM05D004567 ORTHO05D005726 9.0e-12 74.3 103 39.8
Eucgr.J00860 Eucalyptus grandis HOM05D004567 ORTHO05D005726 1.2e-11 73.9 105 36.2
Thhalv10011376m.g Eutrema salsugineum HOM05D004567 ORTHO05D005726 1.2e-11 73.9 80 46.2
Glyma.03G102500 Glycine max HOM05D004567 ORTHO05D005726 1.2e-11 73.9 120 36.7
TWI74G0160 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 1.2e-11 73.9 80 47.5
Cpa.g.sc0.162 Carica papaya HOM05D004567 ORTHO05D005726 1.5e-11 73.6 80 46.2
Ca_23147_v3 Cicer arietinum L. HOM05D004567 ORTHO05D005726 1.5e-11 73.6 123 33.3
QL04p025799 Quercus lobata HOM05D004567 ORTHO05D005726 1.5e-11 73.6 145 30.3
SalBow7G4790 Salvia bowleyana HOM05D004567 ORTHO05D005726 2.0e-11 73.2 95 43.2
vmacro12414 Vaccinium macrocarpon HOM05D004567 ORTHO05D005726 2.0e-11 73.2 148 32.4
Phvul.010G040700 Phaseolus vulgaris HOM05D004567 ORTHO05D005726 2.6e-11 72.8 104 38.5
Sp1g37000 Schrenkiella parvula HOM05D004567 ORTHO05D005726 2.6e-11 72.8 80 45.0
Glyma.07G121300 Glycine max HOM05D004567 ORTHO05D005726 3.4e-11 72.4 136 35.3
MD02G1226800 Malus domestica HOM05D004567 ORTHO05D005726 3.4e-11 72.4 123 36.6
Actinidia11176 Actinidia chinensis HOM05D004567 ORTHO05D005726 4.5e-11 72.0 100 42.0
CARHR040180 Cardamine hirsuta HOM05D004567 ORTHO05D005726 4.5e-11 72.0 80 45.0
Cc00_g04630 Coffea canephora HOM05D004567 ORTHO05D005726 4.5e-11 72.0 80 46.2
Duzib052G0538 Durio zibethinus HOM05D004567 ORTHO05D005726 4.5e-11 72.0 140 32.9
TWI53G0531 Tripterygium wilfordii HOM05D004567 ORTHO05D005726 4.5e-11 72.0 103 37.9
EL10Ac9g22943 Beta vulgaris HOM05D004567 ORTHO05D005726 5.8e-11 71.6 81 42.0
Lj3g0010315 Lotus japonicus HOM05D004567 ORTHO05D005726 5.8e-11 71.6 80 43.8
Manes.11G065400 Manihot esculenta HOM05D004567 ORTHO05D005726 5.8e-11 71.6 89 42.7
Prupe.2G113700 Prunus persica HOM05D004567 ORTHO05D005726 5.8e-11 71.6 80 46.2
AT1G50120 Arabidopsis thaliana HOM05D004567 ORTHO05D005726 7.6e-11 71.2 96 42.7
AUR62015228 Chenopodium quinoa HOM05D004567 ORTHO05D005726 7.6e-11 71.2 86 39.5
Medtr8g009530 Medicago truncatula HOM05D004567 ORTHO05D005726 7.6e-11 71.2 119 35.3
PSO063G1783 Papaver somniferum HOM05D004567 ORTHO05D005726 7.6e-11 71.2 129 31.8
Rhsim06G0125800 Rhododendron simsii HOM05D004567 ORTHO05D005726 9.9e-11 70.9 118 37.3
Aqoxy7G00425 Aquilegia oxysepala HOM05D004567 ORTHO05D005726 1.3e-10 70.5 104 35.6
AL1G57750 Arabidopsis lyrata HOM05D004567 ORTHO05D005726 1.3e-10 70.5 80 45.0
BolC3t21263H Brassica oleracea HOM05D004567 ORTHO05D005726 1.7e-10 70.1 90 42.2
Atru.chr10.1157 Acer truncatum HOM05D004567 ORTHO05D005726 2.2e-10 69.7 107 39.3
AUR62017692 Chenopodium quinoa HOM05D004567 ORTHO05D005726 2.2e-10 69.7 80 40.0
Thecc.02G160600 Theobroma cacao HOM05D004567 ORTHO05D005726 2.2e-10 69.7 133 34.6
Duzib132G0874 Durio zibethinus HOM05D004567 ORTHO05D005726 2.9e-10 69.3 128 35.9
Sc11g0003400 Simmondsia chinensis HOM05D004567 ORTHO05D005726 2.9e-10 69.3 80 41.2
Aa31LG10G4020 Aethionema arabicum HOM05D004567 ORTHO05D005726 3.8e-10 68.9 80 46.2
SMO367G1304 Selaginella moellendorffii HOM05D004567 ORTHO05D005726 3.8e-10 68.9 86 43.0
THA.LOC104815215 Tarenaya hassleriana HOM05D004567 ORTHO05D005726 3.8e-10 68.9 134 32.1
A08p03320 Brassica napus HOM05D004567 ORTHO05D005726 4.9e-10 68.6 80 42.5
VMungo0331G0285 Vigna mungo HOM05D004567 ORTHO05D005726 4.9e-10 68.6 109 35.8
Gohir.A12G134100 Gossypium hirsutum HOM05D004567 ORTHO05D005726 6.4e-10 68.2 112 39.3
C03p89490 Brassica napus HOM05D004567 ORTHO05D005726 8.4e-10 67.8 90 42.2
CSS0021756 Camellia sinensis var. sinensis HOM05D004567 ORTHO05D005726 8.4e-10 67.8 121 36.4
Lj7A481G48 Lonicera japonica HOM05D004567 ORTHO05D005726 8.4e-10 67.8 80 40.0
PGSC0003DMG402027620 Solanum tuberosum HOM05D004567 ORTHO05D005726 8.4e-10 67.8 102 38.2
arahy.Tifrunner.gnm1.ann1.JL30IG Arachis hypogaea HOM05D004567 ORTHO05D005726 1.1e-09 67.4 108 35.2
C06p05010 Brassica napus HOM05D004567 ORTHO05D005726 1.1e-09 67.4 91 40.7
BraA08t32365Z Brassica rapa HOM05D004567 ORTHO05D005726 1.1e-09 67.4 80 42.5
Sopen11g010070 Solanum pennellii HOM05D004567 ORTHO05D005726 1.1e-09 67.4 136 34.6
Gorai.008G149200 Gossypium raimondii HOM05D004567 ORTHO05D005726 1.4e-09 67.0 134 34.3
Ah.01g012240 Amaranthus hybridus HOM05D004567 ORTHO05D005726 1.9e-09 66.6 81 35.8
arahy.Tifrunner.gnm1.ann1.2EVD6N Arachis hypogaea HOM05D004567 ORTHO05D005726 1.9e-09 66.6 105 34.3
Migut.N03351 Erythranthe guttata HOM05D004567 ORTHO05D005726 1.9e-09 66.6 80 42.5
BraA06t23544Z Brassica rapa HOM05D004567 ORTHO05D005726 2.4e-09 66.2 91 41.8
PSO832G3127 Papaver somniferum HOM05D004567 ORTHO05D005726 2.4e-09 66.2 104 32.7
BolC6t35627H Brassica oleracea HOM05D004567 ORTHO05D005726 3.2e-09 65.9 91 39.6
Hma1.2p1_1513F.1_g288000 Hydrangea macrophylla HOM05D004567 ORTHO05D005726 3.2e-09 65.9 109 33.0
PSO339G1936 Papaver somniferum HOM05D004567 ORTHO05D005726 3.2e-09 65.9 103 32.0
A06p03360 Brassica napus HOM05D004567 ORTHO05D005726 4.2e-09 65.5 80 41.2
ClCG10G008350 Citrullus lanatus HOM05D004567 ORTHO05D005726 4.2e-09 65.5 115 31.3
BcaC08g43196 Brassica carinata HOM05D004567 ORTHO05D005726 5.5e-09 65.1 91 39.6
Solyc11g019960.2 Solanum lycopersicum HOM05D004567 ORTHO05D005726 5.5e-09 65.1 136 33.8
Gohir.D12G137700 Gossypium hirsutum HOM05D004567 ORTHO05D005726 7.1e-09 64.7 134 33.6
Manes.04G103500 Manihot esculenta HOM05D004567 ORTHO05D005726 7.1e-09 64.7 80 42.5
BcaB07g33468 Brassica carinata HOM05D004567 ORTHO05D005726 9.3e-09 64.3 79 43.0
Nitab4.5_0004158g0020 Nicotiana tabacum HOM05D004567 ORTHO05D005726 9.3e-09 64.3 80 43.8
TPR.G17362 Trifolium pratense HOM05D004567 ORTHO05D005726 9.3e-09 64.3 83 38.6
Peaxi162Scf01013g00124 Petunia axillaris HOM05D004567 ORTHO05D005726 1.2e-08 63.9 82 42.7
Psat4g218760 Pisum sativum HOM05D004567 ORTHO05D005726 1.2e-08 63.9 115 30.4
AagrBONN_evm.TU.Sc2ySwM_228.3324 Anthoceros agrestis HOM05D004567 ORTHO05D005726 2.1e-08 63.2 73 42.5
Sed0017461 Sechium edule HOM05D004567 ORTHO05D005726 2.1e-08 63.2 107 34.6
SHI31088 Sapria himalayana HOM05D004567 ORTHO05D005726 2.7e-08 62.8 80 37.5
BcaB04g17271 Brassica carinata HOM05D004567 ORTHO05D005726 3.5e-08 62.4 100 41.0
Carub.0001s3927 Capsella rubella HOM05D004567 ORTHO05D005726 3.5e-08 62.4 91 39.6
MELO3C018973.2 Cucumis melo HOM05D004567 ORTHO05D005726 3.5e-08 62.4 80 37.5
DCAR_011423 Daucus carota HOM05D004567 ORTHO05D005726 1.0e-07 60.8 136 30.1
CsaV3_4G009100 Cucumis sativus L. HOM05D004567 ORTHO05D005726 1.3e-07 60.5 80 36.2
Oeu037755.1 Olea europaea HOM05D004567 ORTHO05D005726 1.3e-07 60.5 85 38.8
SGA_v2.0_scaffold24G10556 Striga asiatica HOM05D004567 ORTHO05D005726 1.3e-07 60.5 98 38.8
Rhsim04G0129400 Rhododendron simsii HOM05D004567 ORTHO05D005726 5.1e-07 58.5 85 41.2
Lsat_1_v5_gn_5_37660 Lactuca sativa HOM05D004567 ORTHO05D005726 1.9e-06 56.6 80 36.2
Oeu029994.1 Olea europaea HOM05D004567 ORTHO05D005726 2.5e-06 56.2 87 35.6
Sed0015165 Sechium edule HOM05D004567 ORTHO05D005726 5.6e-06 55.1 107 27.1


User provided reference genes

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