Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 5.0e-67 257.7 134 100.0
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 9.9e-15 84.0 96 40.6
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 8.4e-14 80.9 92 41.3
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 1.4e-13 80.1 97 37.1
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.4e-13 80.1 96 38.5
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 1.9e-13 79.7 96 39.6
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 2.4e-13 79.3 94 37.2
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 4.1e-13 78.6 94 37.2
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 1.2e-12 77.0 94 37.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 1.6e-12 76.6 91 40.7
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 3.5e-12 75.5 92 37.0
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 4.6e-12 75.1 94 35.1
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 6.0e-12 74.7 94 39.4
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 6.0e-12 74.7 93 39.8
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 1.3e-11 73.6 93 36.6
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 1.3e-11 73.6 94 37.2
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 1.3e-11 73.6 95 35.8
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 1.7e-11 73.2 94 42.6
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 3.0e-11 72.4 94 34.0
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 3.9e-11 72.0 93 36.6
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 3.9e-11 72.0 95 35.8
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 5.1e-11 71.6 94 37.2
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 6.6e-11 71.2 93 39.8
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 1.1e-10 70.5 93 37.6
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 1.1e-10 70.5 90 36.7
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 1.1e-10 70.5 96 35.4
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 1.5e-10 70.1 91 39.6
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 1.5e-10 70.1 93 38.7
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 2.5e-10 69.3 94 36.2
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 2.5e-10 69.3 94 35.1
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 2.5e-10 69.3 101 31.7
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 2.5e-10 69.3 95 33.7
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 3.3e-10 68.9 94 35.1
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 3.3e-10 68.9 93 38.7
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 3.3e-10 68.9 102 33.3
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 4.3e-10 68.6 92 35.9
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 4.3e-10 68.6 93 37.6
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 5.6e-10 68.2 96 31.2
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 5.6e-10 68.2 97 40.2
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 9.6e-10 67.4 94 36.2
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 1.2e-09 67.0 91 33.0
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 1.2e-09 67.0 96 30.2
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 1.6e-09 66.6 94 34.0
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 1.6e-09 66.6 94 33.0
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 1.6e-09 66.6 96 33.3
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 2.1e-09 66.2 96 34.4
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 3.6e-09 65.5 94 31.9
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 4.7e-09 65.1 96 34.4
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 4.7e-09 65.1 92 31.5
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 6.2e-09 64.7 92 33.7
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 8.1e-09 64.3 96 33.3
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 1.1e-08 63.9 93 34.4
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 1.1e-08 63.9 93 34.4
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 1.1e-08 63.9 92 34.8
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 1.1e-08 63.9 93 35.5
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.4e-08 63.5 96 33.3
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.8e-08 63.2 93 35.5
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 1.8e-08 63.2 92 34.8
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 2.4e-08 62.8 88 31.8
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 2.4e-08 62.8 93 37.6
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 3.1e-08 62.4 93 34.4
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 4.0e-08 62.0 88 34.1
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 6.8e-08 61.2 99 32.3
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 1.2e-07 60.5 92 29.3
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.5e-07 60.1 92 29.3
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 1.5e-07 60.1 90 40.0
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 1.5e-07 60.1 88 33.0
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 2.0e-07 59.7 36 88.9
SEGI_40474 Sequoiadendron giganteum HOM05D001137 ORTHO05D001967 9.9e-07 57.4 35 88.6
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 1.3e-06 57.0 85 34.1
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 2.9e-06 55.8 89 31.5
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 2.9e-06 55.8 91 31.9
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 4.9e-06 55.1 85 32.9
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 6.4e-06 54.7 91 30.8
SEGI_05376 Sequoiadendron giganteum HOM05D000098 ORTHO05D000546 8.4e-06 54.3 34 85.3


User provided reference genes

Program Settings