Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.8e-113 412.5 202 100.0
SEGI_25770 Sequoiadendron giganteum HOM05D000258 ORTHO05D000153 1.3e-23 114.0 56 100.0
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.3e-22 109.4 54 98.1
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 9.0e-20 101.3 125 41.6
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.2e-19 100.9 108 47.2
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.0e-18 97.8 81 55.6
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.0e-18 97.8 84 51.2
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.3e-18 97.4 73 57.5
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 1.3e-18 97.4 95 47.4
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.2e-18 96.7 88 47.7
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 2.9e-18 96.3 79 55.7
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.8e-18 95.9 88 47.7
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 3.8e-18 95.9 126 42.1
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 4.9e-18 95.5 73 56.2
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 4.9e-18 95.5 88 46.6
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.9e-18 95.5 88 47.7
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 4.9e-18 95.5 106 44.3
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.1e-17 94.4 84 48.8
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.9e-17 93.6 130 36.9
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 3.2e-17 92.8 92 48.9
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 3.2e-17 92.8 88 47.7
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 4.2e-17 92.4 87 46.0
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 4.2e-17 92.4 92 48.9
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 4.2e-17 92.4 87 47.1
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 4.2e-17 92.4 87 44.8
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 5.5e-17 92.0 85 50.6
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 5.5e-17 92.0 92 48.9
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 5.5e-17 92.0 87 46.0
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 5.5e-17 92.0 106 44.3
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 7.1e-17 91.7 87 46.0
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.2e-16 90.9 79 51.9
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 1.2e-16 90.9 72 52.8
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.2e-16 90.9 73 52.1
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.2e-16 90.9 86 47.7
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.6e-16 90.5 83 50.6
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 2.1e-16 90.1 85 45.9
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.1e-16 90.1 98 48.0
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 2.7e-16 89.7 97 44.3
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 3.5e-16 89.4 79 50.6
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 3.5e-16 89.4 84 48.8
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 4.6e-16 89.0 98 46.9
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 6.0e-16 88.6 73 52.1
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 6.0e-16 88.6 83 47.0
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 1.0e-15 87.8 108 38.9
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 1.0e-15 87.8 89 44.9
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.3e-15 87.4 89 44.9
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.3e-15 87.4 87 47.1
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.8e-15 87.0 83 45.8
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.8e-15 87.0 99 42.4
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 2.3e-15 86.7 73 50.7
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 2.3e-15 86.7 85 44.7
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 3.0e-15 86.3 83 48.2
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.0e-15 86.3 84 47.6
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 5.1e-15 85.5 87 41.4
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 5.1e-15 85.5 83 47.0
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 8.7e-15 84.7 86 46.5
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.1e-14 84.3 87 42.5
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.5e-14 84.0 73 50.7
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 1.5e-14 84.0 71 50.7
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 1.9e-14 83.6 86 40.7
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 3.3e-14 82.8 87 42.5
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 3.3e-14 82.8 108 38.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 3.3e-14 82.8 89 39.3
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 4.3e-14 82.4 83 44.6
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 4.3e-14 82.4 85 43.5
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 4.3e-14 82.4 85 43.5
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 5.7e-14 82.0 85 47.1
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 7.4e-14 81.6 83 44.6
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 7.4e-14 81.6 73 47.9
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 7.4e-14 81.6 84 48.8
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 7.4e-14 81.6 104 37.5
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 9.6e-14 81.3 71 47.9
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.6e-13 80.5 90 44.4
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 2.1e-13 80.1 141 34.8
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 2.1e-13 80.1 93 38.7
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 2.8e-13 79.7 85 42.4
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.8e-13 79.7 88 39.8
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 3.7e-13 79.3 62 53.2
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 3.7e-13 79.3 83 49.4
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 3.7e-13 79.3 83 49.4
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 3.7e-13 79.3 73 45.2
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 4.8e-13 79.0 73 45.2
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 4.8e-13 79.0 111 34.2
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 8.2e-13 78.2 85 42.4
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.4e-12 77.4 82 41.5
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.8e-12 77.0 83 43.4
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 3.1e-12 76.3 72 51.4
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 9.0e-12 74.7 79 44.3
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.5e-11 73.9 85 40.0
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 4.5e-11 72.4 84 44.0
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 5.8e-11 72.0 115 38.3
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.7e-10 70.5 112 37.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 2.9e-10 69.7 73 42.5
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 6.5e-10 68.6 83 42.2
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.1e-09 67.8 43 65.1
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 1.1e-09 67.8 43 65.1
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.4e-09 67.4 64 46.9
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 3.2e-09 66.2 58 55.2
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 4.2e-09 65.9 62 46.8
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.2e-08 64.3 62 46.8
SEGI_12332 Sequoiadendron giganteum HOM05D000404 ORTHO05D002003 7.9e-08 61.6 84 44.0
SEGI_35837 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 1.3e-07 60.8 63 47.6
SEGI_34233 Sequoiadendron giganteum HOM05D001950 ORTHO05D001926 6.7e-07 58.5 53 52.8
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 1.9e-06 57.0 53 45.3
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.5e-06 56.6 58 48.3


User provided reference genes

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