Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 2.6e-80 302.0 153 100.0
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 5.9e-32 141.4 91 75.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.3e-31 139.4 91 72.5
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 5.0e-31 138.3 91 75.8
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 5.0e-31 138.3 91 74.7
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 6.6e-31 137.9 90 76.7
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.1e-30 137.1 86 79.1
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.1e-30 137.1 91 75.8
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.1e-30 137.1 91 72.5
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.5e-30 136.7 91 73.6
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 3.3e-30 135.6 91 73.6
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.3e-30 135.2 87 75.9
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 7.3e-30 134.4 91 71.4
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 9.5e-30 134.0 91 68.1
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 9.5e-30 134.0 91 74.7
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 1.6e-29 133.3 91 71.4
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 2.1e-29 132.9 91 72.5
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 2.1e-29 132.9 91 73.6
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 2.1e-29 132.9 87 74.7
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 2.8e-29 132.5 91 71.4
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.6e-29 132.1 91 70.3
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 3.6e-29 132.1 87 72.4
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 4.7e-29 131.7 87 72.4
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 4.7e-29 131.7 87 72.4
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 4.7e-29 131.7 91 68.1
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 6.2e-29 131.3 90 72.2
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 8.0e-29 131.0 91 72.5
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 8.0e-29 131.0 91 69.2
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 8.0e-29 131.0 91 71.4
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 8.0e-29 131.0 91 67.0
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.0e-28 130.6 91 69.2
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 1.0e-28 130.6 91 71.4
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.4e-28 130.2 87 70.1
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.4e-28 130.2 87 72.4
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 1.4e-28 130.2 91 70.3
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.8e-28 129.8 91 69.2
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 1.8e-28 129.8 91 68.1
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.8e-28 129.8 91 68.1
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 2.3e-28 129.4 91 70.3
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 2.3e-28 129.4 87 72.4
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 2.3e-28 129.4 87 73.6
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.1e-28 129.0 87 72.4
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 3.1e-28 129.0 91 68.1
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 4.0e-28 128.6 87 70.1
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 4.0e-28 128.6 91 70.3
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 4.0e-28 128.6 91 67.0
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.2e-28 128.3 90 70.0
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 6.8e-28 127.9 86 69.8
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 8.9e-28 127.5 91 65.9
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 8.9e-28 127.5 91 68.1
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 8.9e-28 127.5 92 64.1
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.5e-27 126.7 91 68.1
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 1.5e-27 126.7 91 68.1
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 2.0e-27 126.3 91 68.1
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.0e-27 126.3 87 70.1
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 2.0e-27 126.3 91 68.1
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 2.0e-27 126.3 91 69.2
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 2.0e-27 126.3 91 68.1
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 2.6e-27 125.9 91 68.1
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 3.4e-27 125.6 90 66.7
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 3.4e-27 125.6 90 66.7
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 3.4e-27 125.6 90 66.7
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 3.4e-27 125.6 90 66.7
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 3.4e-27 125.6 91 69.2
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 3.4e-27 125.6 91 67.0
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 4.4e-27 125.2 91 65.9
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 4.4e-27 125.2 91 68.1
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 5.8e-27 124.8 91 67.0
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 5.8e-27 124.8 92 67.4
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 7.5e-27 124.4 91 67.0
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 9.8e-27 124.0 90 65.6
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 1.7e-26 123.2 91 63.7
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 1.7e-26 123.2 87 69.0
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 2.2e-26 122.9 87 69.0
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 2.2e-26 122.9 87 67.8
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 2.9e-26 122.5 91 67.0
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 3.7e-26 122.1 87 66.7
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 4.9e-26 121.7 92 66.3
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 6.4e-26 121.3 91 64.8
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 6.4e-26 121.3 87 66.7
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 6.4e-26 121.3 91 62.6
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.4e-26 121.3 83 69.9
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 8.3e-26 120.9 87 66.7
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 1.1e-25 120.6 80 71.2
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.1e-25 120.6 100 62.0
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.4e-25 120.2 89 67.4
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.4e-25 120.2 91 68.1
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 1.4e-25 120.2 86 65.1
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 3.2e-25 119.0 91 64.8
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.4e-25 118.2 91 65.9
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 5.4e-25 118.2 91 65.9
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 7.0e-25 117.9 91 64.8
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 9.2e-25 117.5 91 64.8
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 9.2e-25 117.5 91 64.8
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.2e-24 117.1 91 65.9
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 2.0e-24 116.3 88 65.9
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 2.7e-24 115.9 87 66.7
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 3.5e-24 115.5 92 63.0
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 3.5e-24 115.5 91 64.8
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 3.5e-24 115.5 91 63.7
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 3.5e-24 115.5 87 66.7
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 4.6e-24 115.2 91 64.8
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 7.8e-24 114.4 91 65.9
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 3.9e-23 112.1 92 62.0
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 8.6e-23 110.9 91 62.6
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 1.4e-20 103.6 76 65.8
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 1.4e-20 103.6 72 69.4
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 3.1e-20 102.4 72 66.7
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 3.4e-19 99.0 92 54.3
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 6.4e-18 94.7 66 66.7
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.2e-17 92.4 62 71.0
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 4.6e-16 88.6 63 68.3
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 1.1e-14 84.0 64 65.6
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 7.3e-14 81.3 59 66.1


User provided reference genes

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