Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 6.4e-79 297.4 151 100.0
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.6e-72 275.4 148 94.6
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 1.5e-35 153.3 147 55.8
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 3.3e-35 152.1 141 58.2
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 9.7e-35 150.6 143 56.6
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 1.6e-34 149.8 142 52.1
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 2.8e-34 149.1 148 52.7
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.8e-34 149.1 137 53.3
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.8e-34 149.1 137 53.3
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 3.7e-34 148.7 130 55.4
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 1.2e-32 143.7 134 54.5
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 1.2e-32 143.7 136 54.4
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 1.5e-32 143.3 148 52.7
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 1.5e-32 143.3 131 56.5
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 2.6e-32 142.5 128 57.0
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 7.7e-32 141.0 139 56.1
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 7.7e-32 141.0 131 57.3
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 7.7e-32 141.0 128 54.7
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 1.0e-31 140.6 126 55.6
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 1.7e-31 139.8 139 54.0
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 1.7e-31 139.8 140 55.0
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 2.9e-31 139.0 135 51.9
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 2.9e-31 139.0 150 51.3
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 3.8e-31 138.7 132 56.1
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 6.5e-31 137.9 128 55.5
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 8.5e-31 137.5 143 51.0
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 1.1e-30 137.1 130 53.8
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 1.1e-30 137.1 125 54.4
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.9e-30 136.3 132 53.0
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 1.9e-30 136.3 143 51.0
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 1.9e-30 136.3 138 52.2
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.5e-30 136.0 146 52.7
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 3.2e-30 135.6 143 48.3
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 4.2e-30 135.2 120 56.7
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 4.2e-30 135.2 123 52.8
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 7.2e-30 134.4 139 49.6
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 7.2e-30 134.4 137 52.6
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 9.4e-30 134.0 134 53.7
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 1.2e-29 133.7 143 50.3
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 2.7e-29 132.5 134 52.2
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 3.6e-29 132.1 135 53.3
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 3.6e-29 132.1 146 51.4
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 3.6e-29 132.1 131 51.1
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 3.6e-29 132.1 145 51.7
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 3.6e-29 132.1 145 51.7
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 3.6e-29 132.1 145 51.7
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 3.6e-29 132.1 133 53.4
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 4.6e-29 131.7 134 50.0
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 6.1e-29 131.3 136 51.5
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 7.9e-29 131.0 134 53.0
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 7.9e-29 131.0 136 51.5
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 7.9e-29 131.0 149 51.0
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 1.8e-28 129.8 128 51.6
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 1.8e-28 129.8 150 46.7
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 1.8e-28 129.8 135 51.9
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.8e-28 129.8 127 52.0
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 3.0e-28 129.0 122 54.1
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 3.9e-28 128.6 144 47.9
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 5.1e-28 128.3 135 52.6
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 6.7e-28 127.9 129 54.3
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 6.7e-28 127.9 124 55.6
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 6.7e-28 127.9 133 49.6
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 8.8e-28 127.5 138 49.3
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 8.8e-28 127.5 137 51.1
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.1e-27 127.1 135 52.6
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 1.1e-27 127.1 142 47.9
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 1.5e-27 126.7 126 52.4
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 1.5e-27 126.7 139 51.1
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 3.3e-27 125.6 126 51.6
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 4.4e-27 125.2 142 49.3
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 5.7e-27 124.8 135 51.9
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 5.7e-27 124.8 140 48.6
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 9.7e-27 124.0 135 51.9
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 1.3e-26 123.6 135 48.9
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 1.3e-26 123.6 148 46.6
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 1.3e-26 123.6 133 50.4
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 1.7e-26 123.2 125 52.0
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 4.8e-26 121.7 135 50.4
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 4.8e-26 121.7 138 50.0
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 6.3e-26 121.3 135 50.4
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 8.2e-26 120.9 131 45.8
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.4e-25 120.2 133 51.1
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 2.4e-25 119.4 139 46.8
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 3.1e-25 119.0 142 47.2
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 3.1e-25 119.0 142 47.2
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 4.1e-25 118.6 134 47.8
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 5.3e-25 118.2 122 47.5
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 6.9e-25 117.9 135 48.1
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 6.9e-25 117.9 194 38.1
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 2.6e-24 115.9 135 47.4
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 3.4e-24 115.5 152 49.3
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 5.9e-24 114.8 110 52.7
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 2.2e-23 112.8 135 43.7
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 3.8e-23 112.1 135 45.9
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.6e-21 106.7 122 45.1
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 4.7e-21 105.1 93 59.1
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.3e-20 102.8 119 45.4
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 5.2e-20 101.7 98 50.0
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 8.8e-20 100.9 118 44.9
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 8.8e-20 100.9 118 44.9
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 1.5e-19 100.1 115 46.1
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 2.6e-19 99.4 136 44.9
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.4e-19 98.6 97 47.4
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 7.4e-19 97.8 93 48.4
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 3.7e-18 95.5 134 41.0
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 9.4e-14 80.9 138 37.0
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.1e-13 79.7 136 38.2
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 1.3e-10 70.5 124 40.3
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 3.1e-09 65.9 142 38.0
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 9.1e-09 64.3 51 54.9
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.2e-08 63.9 52 53.8
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.0e-08 63.2 48 56.2
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.3e-07 60.5 59 49.2
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.9e-06 56.6 48 54.2
TAR629G1217 Trochodendron aralioides HOM05D004844 ORTHO05D006036 9.4e-06 54.3 89 34.8


User provided reference genes

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