Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26596 Sequoiadendron giganteum HOM05D000967 ORTHO05D007533 3.8e-114 414.8 211 100.0
SEGI_33121 Sequoiadendron giganteum HOM05D000967 ORTHO05D000796 1.6e-43 180.3 117 76.9
SEGI_08813 Sequoiadendron giganteum HOM05D000087 ORTHO05D006949 7.9e-27 124.8 77 84.4
Mapoly0009s0048 Marchantia polymorpha HOM05D000967 ORTHO05D000796 6.7e-26 121.7 124 55.6
SEGI_21663 Sequoiadendron giganteum HOM05D003391 ORTHO05D005563 7.0e-23 111.7 66 86.4
CBR_g12452 Chara braunii HOM05D000967 ORTHO05D000796 4.7e-19 99.0 136 43.4
CBR_g12448 Chara braunii HOM05D000967 ORTHO05D000796 6.1e-19 98.6 138 44.2
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.8e-18 97.1 61 80.3
SEGI_31749 Sequoiadendron giganteum HOM05D004672 ORTHO05D005732 6.1e-11 72.0 60 68.3
SEGI_33083 Sequoiadendron giganteum HOM05D000121 ORTHO05D000102 1.8e-10 70.5 60 65.0
SEGI_30667 Sequoiadendron giganteum HOM05D003523 ORTHO05D004493 3.0e-10 69.7 65 58.5
SEGI_24745 Sequoiadendron giganteum HOM05D004974 ORTHO05D001537 4.0e-10 69.3 65 61.5
SEGI_19642 Sequoiadendron giganteum HOM05D001423 ORTHO05D001412 5.2e-10 68.9 65 61.5
SEGI_37358 Sequoiadendron giganteum HOM05D005389 ORTHO05D008484 6.8e-10 68.6 65 60.0
SEGI_31008 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 2.0e-09 67.0 41 82.9
SEGI_29823 Sequoiadendron giganteum HOM05D004362 ORTHO05D000001 2.6e-09 66.6 60 61.7
SEGI_06070 Sequoiadendron giganteum HOM05D005823 ORTHO05D000001 3.7e-08 62.8 65 55.4
Pp3c24_17360 Physcomitrium patens HOM05D000967 ORTHO05D000796 6.3e-08 62.0 142 31.7
DCAR_030881 Daucus carota HOM05D000967 ORTHO05D000796 8.3e-08 61.6 143 31.5
SEGI_26654 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-07 61.2 65 53.8
SEGI_40071 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-07 61.2 65 53.8
Pp3c2_26190 Physcomitrium patens HOM05D000967 ORTHO05D000796 1.4e-07 60.8 140 31.4
SMO230G0039 Selaginella moellendorffii HOM05D000967 ORTHO05D000796 1.4e-07 60.8 142 32.4
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 1.8e-07 60.5 66 48.5
unitig_748.g7952 Utricularia gibba HOM05D000967 ORTHO05D000796 1.8e-07 60.5 132 32.6
SEGI_15415 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.4e-07 60.1 45 71.1
SGA_v2.0_scaffold215G42320 Striga asiatica HOM05D000967 ORTHO05D000796 3.1e-07 59.7 145 26.2
Pp3c8_16960 Physcomitrium patens HOM05D000967 ORTHO05D000796 4.1e-07 59.3 142 30.3
Mapoly0124s0065 Marchantia polymorpha HOM05D000967 ORTHO05D000796 7.0e-07 58.5 140 26.4
SEGI_17097 Sequoiadendron giganteum HOM05D002143 ORTHO05D002260 1.2e-06 57.8 65 49.2
SEGI_17155 Sequoiadendron giganteum HOM05D000006 ORTHO05D003106 1.2e-06 57.8 62 50.0
Zm00001eb081530 Zea mays HOM05D000967 ORTHO05D000796 1.2e-06 57.8 190 25.8
SEGI_33448 Sequoiadendron giganteum HOM05D004978 ORTHO05D000001 1.6e-06 57.4 60 51.7
Migut.I00521 Erythranthe guttata HOM05D000967 ORTHO05D000796 2.7e-06 56.6 135 28.1
Os08g0128200 Oryza sativa ssp. japonica HOM05D000967 ORTHO05D000796 2.7e-06 56.6 144 25.7
SEGI_27889 Sequoiadendron giganteum HOM05D003736 ORTHO05D004451 3.5e-06 56.2 41 68.3
HPP92_002718 Vanilla planifolia HOM05D000967 ORTHO05D000796 4.5e-06 55.8 141 27.0
MSTRG.16004 Avicennia marina HOM05D000967 ORTHO05D000796 5.9e-06 55.5 135 28.9
EL10Ac8g20148 Beta vulgaris HOM05D000967 ORTHO05D000796 5.9e-06 55.5 142 28.2
CDE08G1496 Ceratophyllum demersum HOM05D000967 ORTHO05D000796 5.9e-06 55.5 144 27.8
Migut.M01359 Erythranthe guttata HOM05D000967 ORTHO05D000796 5.9e-06 55.5 144 26.4
Nn8g41137 Nelumbo nucifera HOM05D000967 ORTHO05D000796 5.9e-06 55.5 175 29.1
unitig_8.g3034 Utricularia gibba HOM05D000967 ORTHO05D000796 5.9e-06 55.5 141 26.2
arahy.Tifrunner.gnm1.ann1.90Q9AE Arachis hypogaea HOM05D000967 ORTHO05D000796 7.7e-06 55.1 124 30.6
arahy.Tifrunner.gnm1.ann1.QWH41Z Arachis hypogaea HOM05D000967 ORTHO05D000796 7.7e-06 55.1 124 30.6
SEGI_14841 Sequoiadendron giganteum HOM05D000006 ORTHO05D000001 7.7e-06 55.1 71 49.3
SEGI_15189 Sequoiadendron giganteum HOM05D001214 ORTHO05D001029 7.7e-06 55.1 53 58.5
SEGI_17082 Sequoiadendron giganteum HOM05D001214 ORTHO05D001029 7.7e-06 55.1 53 58.5
SEGI_37969 Sequoiadendron giganteum HOM05D000343 ORTHO05D005934 7.7e-06 55.1 69 46.4


User provided reference genes

Program Settings