Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 0.0e+00 1966.8 1035 100.0
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.4e-193 681.0 1056 42.4
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 5.9e-192 675.6 1054 41.6
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 1.2e-189 667.9 1057 41.5
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 1.6e-181 641.0 1057 39.4
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 1.2e-179 634.8 1058 38.7
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 1.0e-175 621.7 1056 38.5
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 1.9e-174 617.5 1142 38.3
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 4.3e-174 616.3 1062 38.0
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 7.3e-174 615.5 1059 37.7
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 1.2e-173 614.8 1049 38.6
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 2.1e-173 614.0 1069 38.2
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 3.1e-172 610.1 1052 38.9
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 5.2e-172 609.4 1070 37.6
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 1.2e-171 608.2 1038 38.5
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 2.6e-171 607.1 1052 38.2
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 4.4e-171 606.3 1055 38.9
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 5.8e-171 605.9 1068 37.7
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 1.3e-170 604.7 1056 38.9
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 2.9e-170 603.6 1067 37.9
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 1.1e-169 601.7 1056 38.7
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 2.1e-168 597.4 1053 38.1
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 1.7e-167 594.3 1055 37.7
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 1.1e-166 591.7 1129 36.4
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 1.9e-166 590.9 1052 35.7
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 3.3e-166 590.1 1055 37.8
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 4.3e-166 589.7 1064 37.3
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 1.2e-165 588.2 1050 37.1
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.6e-165 587.8 1056 36.9
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 2.8e-165 587.0 1054 38.7
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 3.1e-164 583.6 1062 36.2
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 4.0e-164 583.2 1058 37.6
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 6.8e-164 582.4 1058 37.5
FAN05G4332 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.2e-163 581.6 1052 38.3
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 4.4e-163 579.7 1124 35.8
CANSAT56G2471 Cannabis sativa HOM05D002451 ORTHO05D005601 1.7e-162 577.8 1055 36.2
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 1.7e-162 577.8 1056 37.4
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 3.7e-162 576.6 1054 36.5
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 6.4e-162 575.9 1053 37.0
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.9e-161 574.3 1056 37.5
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 6.0e-160 569.3 1051 36.3
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 1.0e-159 568.5 1055 36.8
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 3.0e-159 567.0 1056 37.1
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 8.6e-159 565.5 1049 36.2
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 1.5e-158 564.7 1035 36.4
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 1.9e-158 564.3 1042 36.9
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 3.3e-158 563.5 1051 35.9
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 8.1e-157 558.9 1067 35.3
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.4e-156 558.1 1062 36.2
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 1.5e-155 554.7 1072 36.5
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 1.5e-155 554.7 1073 37.2
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 1.3e-154 551.6 1054 35.2
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 2.9e-154 550.4 1082 35.3
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 4.9e-154 549.7 1053 35.8
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 8.4e-154 548.9 1028 36.1
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 7.1e-153 545.8 1058 35.3
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 4.3e-150 536.6 1063 34.4
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 5.6e-150 536.2 1040 34.4
Eucgr.F03079 Eucalyptus grandis HOM05D002451 ORTHO05D005601 7.3e-150 535.8 1044 36.0
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 7.3e-150 535.8 1051 36.9
arahy.Tifrunner.gnm1.ann1.T566S8 Arachis hypogaea HOM05D002451 ORTHO05D005601 1.6e-149 534.6 1051 35.0
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 2.8e-149 533.9 1057 35.2
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 8.1e-149 532.3 1059 35.6
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 1.8e-148 531.2 1043 35.0
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 3.1e-148 530.4 1046 34.2
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 5.3e-148 529.6 1051 35.5
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 9.9e-147 525.4 1052 34.0
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 6.4e-146 522.7 1041 34.9
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 8.4e-146 522.3 1048 34.5
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 3.2e-145 520.4 1059 34.7
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 4.2e-145 520.0 1060 34.8
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 1.2e-144 518.5 1054 36.0
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 4.6e-144 516.5 1058 35.0
BcaC03g17628 Brassica carinata HOM05D002451 ORTHO05D005601 2.3e-143 514.2 1052 34.8
BcaB07g30001 Brassica carinata HOM05D002451 ORTHO05D005601 3.0e-143 513.8 1059 34.9
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 6.6e-143 512.7 1056 35.7
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 1.9e-142 511.1 1061 34.4
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 2.5e-142 510.8 1054 34.5
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 4.3e-142 510.0 1060 34.9
Hund07601 Selenicereus undatus HOM05D002451 ORTHO05D005601 4.3e-142 510.0 1029 35.5
BolC2t11683H Brassica oleracea HOM05D002451 ORTHO05D005601 5.6e-142 509.6 1053 34.8
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 5.6e-142 509.6 1053 35.4
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 9.6e-142 508.8 1054 34.6
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 1.3e-141 508.4 1055 34.7
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 2.0e-139 501.1 1052 34.2
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 3.8e-138 496.9 1099 34.3
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.4e-137 495.0 951 37.0
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 3.2e-137 493.8 1049 33.6
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 7.1e-137 492.7 1046 34.4
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 1.2e-131 475.3 1052 33.7
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 3.9e-127 460.3 1030 33.7
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.5e-126 458.4 1045 33.5
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 5.1e-119 433.3 952 33.5
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 5.7e-118 429.9 1022 32.4
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 6.5e-106 389.8 1039 31.2
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 2.4e-100 371.3 903 32.1
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 5.3e-100 370.2 631 38.5
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 5.9e-91 340.1 836 31.8
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.2e-88 332.4 850 30.6
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 2.8e-77 294.7 720 32.2
TAR624G0206 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.4e-71 275.8 447 40.9
CSS0044368 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 8.9e-71 273.1 339 45.7
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 8.6e-66 256.5 546 33.0
CBR_g26190 Chara braunii HOM05D002451 ORTHO05D005601 1.0e-63 249.6 1186 24.7
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.5e-62 245.7 210 58.6
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 2.2e-61 241.9 206 59.2
Cpa.g.sc25.8 Carica papaya HOM05D002451 ORTHO05D005601 1.5e-46 192.6 541 29.9
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 4.4e-46 191.0 264 43.2
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 2.2e-45 188.7 155 58.1
Sc17g0002930 Simmondsia chinensis HOM05D002451 ORTHO05D005601 1.2e-38 166.4 176 52.3
CDE05G1834 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 2.7e-35 155.2 341 35.8
CSS0036196 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 9.6e-33 146.7 355 31.3
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 2.6e-30 138.7 326 32.8
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 1.3e-29 136.3 142 50.7
Aa31LG11G5130 Aethionema arabicum HOM05D002451 ORTHO05D005601 4.2e-28 131.3 350 31.4
TAR624G0431 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.9e-25 122.5 94 64.9
A06p15140 Brassica napus HOM05D002451 ORTHO05D020166 2.0e-22 112.5 154 45.5
BraA06t24629Z Brassica rapa HOM05D002451 ORTHO05D020166 2.0e-22 112.5 154 45.5
Cre13.g605050 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D005601 3.4e-22 111.7 152 41.4
Cpa.g.sc25.5 Carica papaya HOM05D002451 ORTHO05D005601 1.4e-20 106.3 263 33.1
TAR624G0921 Trochodendron aralioides HOM05D002451 ORTHO05D005601 9.6e-17 93.6 242 33.9
Psat3g036640 Pisum sativum HOM05D002451 ORTHO05D005601 8.1e-16 90.5 136 40.4
TAR624G0246 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.6e-14 85.5 102 45.1
Psat4g171400 Pisum sativum HOM05D002451 ORTHO05D005601 4.5e-14 84.7 128 41.4
Cpa.g.sc25.3 Carica papaya HOM05D002451 ORTHO05D005601 1.0e-13 83.6 72 59.7
SHI11090 Sapria himalayana HOM05D002451 ORTHO05D005601 1.0e-13 83.6 61 55.7
CSS0026050 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.9e-13 82.0 72 58.3
CSS0028178 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 2.9e-13 82.0 72 58.3
Zm00001eb320400 Zea mays HOM05D002451 ORTHO05D005601 6.5e-13 80.9 246 29.7
SHI11089 Sapria himalayana HOM05D002451 ORTHO05D005601 4.6e-11 74.7 75 56.0
HPP92_007804 Vanilla planifolia HOM05D002451 ORTHO05D005601 1.8e-10 72.8 147 35.4
SHI11092 Sapria himalayana HOM05D002451 ORTHO05D005601 2.5e-09 68.9 122 31.1
SGA_v2.0_scaffold123G33404 Striga asiatica HOM05D002451 ORTHO05D005601 1.3e-08 66.6 80 40.0
Medtr5g055460 Medicago truncatula HOM05D002451 ORTHO05D005601 2.6e-06 58.9 48 52.1


User provided reference genes

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