Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26295 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 2.3e-60 235.3 114 100.0
SEGI_21411 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 1.9e-46 189.1 98 94.9
SEGI_28596 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 3.2e-46 188.3 101 91.1
SEGI_04035 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 5.4e-46 187.6 101 90.1
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 2.3e-36 155.6 101 71.3
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 1.9e-35 152.5 101 71.3
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 7.3e-35 150.6 101 66.3
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 9.5e-35 150.2 101 69.3
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 1.6e-34 149.4 101 68.3
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 1.6e-34 149.4 101 69.3
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 1.6e-34 149.4 101 69.3
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 2.8e-34 148.7 101 69.3
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 2.8e-34 148.7 101 68.3
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 2.8e-34 148.7 101 66.3
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 2.8e-34 148.7 101 69.3
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 2.8e-34 148.7 101 69.3
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 2.8e-34 148.7 101 68.3
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 3.6e-34 148.3 101 66.3
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 4.7e-34 147.9 101 68.3
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 67.3
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 67.3
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 67.3
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 67.3
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 67.3
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 67.3
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 67.3
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 6.2e-34 147.5 101 66.3
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 8.1e-34 147.1 101 67.3
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 8.1e-34 147.1 101 67.3
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 1.1e-33 146.7 101 66.3
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 1.1e-33 146.7 101 66.3
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 1.1e-33 146.7 103 66.0
HPP92_015810 Vanilla planifolia HOM05D003482 ORTHO05D004194 1.1e-33 146.7 101 68.3
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 1.4e-33 146.4 102 65.7
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 1.4e-33 146.4 101 66.3
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 1.4e-33 146.4 101 64.4
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 1.4e-33 146.4 101 65.3
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 1.8e-33 146.0 103 66.0
ClCG11G013930 Citrullus lanatus HOM05D003482 ORTHO05D004194 2.3e-33 145.6 101 65.3
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 2.3e-33 145.6 101 69.3
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 2.3e-33 145.6 101 67.3
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 2.3e-33 145.6 101 66.3
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 2.3e-33 145.6 101 67.3
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 3.1e-33 145.2 101 63.4
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 3.1e-33 145.2 101 65.3
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 3.1e-33 145.2 102 66.7
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 4.0e-33 144.8 101 68.3
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 5.2e-33 144.4 99 66.7
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 5.2e-33 144.4 101 65.3
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 6.8e-33 144.1 101 68.3
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 6.8e-33 144.1 103 65.0
Hund19390 Selenicereus undatus HOM05D003482 ORTHO05D004194 6.8e-33 144.1 102 65.7
TPR.G18873 Trifolium pratense HOM05D003482 ORTHO05D004194 6.8e-33 144.1 101 67.3
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 8.9e-33 143.7 101 68.3
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 8.9e-33 143.7 101 66.3
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 8.9e-33 143.7 101 64.4
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 8.9e-33 143.7 103 64.1
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 8.9e-33 143.7 101 65.3
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 1.2e-32 143.3 101 66.3
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 1.2e-32 143.3 101 67.3
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 1.2e-32 143.3 101 67.3
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 1.2e-32 143.3 101 67.3
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 1.2e-32 143.3 101 65.3
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 1.2e-32 143.3 101 66.3
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 2.0e-32 142.5 101 66.3
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 2.0e-32 142.5 102 66.7
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 2.0e-32 142.5 101 66.3
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 2.6e-32 142.1 101 66.3
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 2.6e-32 142.1 101 65.3
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 2.6e-32 142.1 101 63.4
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 2.6e-32 142.1 101 63.4
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 2.6e-32 142.1 101 66.3
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 3.4e-32 141.7 102 67.6
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 4.4e-32 141.4 101 64.4
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 4.4e-32 141.4 101 64.4
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 5.8e-32 141.0 101 64.4
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 7.6e-32 140.6 101 65.3
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 7.6e-32 140.6 101 62.4
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 7.6e-32 140.6 106 64.2
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 9.9e-32 140.2 101 61.4
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 9.9e-32 140.2 101 64.4
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 9.9e-32 140.2 101 63.4
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 9.9e-32 140.2 101 63.4
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 1.3e-31 139.8 101 62.4
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 1.7e-31 139.4 96 68.8
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 1.7e-31 139.4 101 64.4
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 2.2e-31 139.0 101 63.4
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 3.8e-31 138.3 101 64.4
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 3.8e-31 138.3 103 63.1
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 4.9e-31 137.9 102 59.8
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 4.9e-31 137.9 101 64.4
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 8.4e-31 137.1 101 60.4
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 1.4e-30 136.3 101 62.4
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 1.4e-30 136.3 101 62.4
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 1.4e-30 136.3 101 63.4
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 1.4e-30 136.3 101 65.3
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 1.9e-30 136.0 96 67.7
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 2.4e-30 135.6 101 65.3
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 5.4e-30 134.4 101 62.4
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 7.1e-30 134.0 101 59.4
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 9.2e-30 133.7 101 64.4
SEGI_20762 Sequoiadendron giganteum HOM05D003482 ORTHO05D004194 9.2e-30 133.7 77 85.7
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 2.1e-29 132.5 101 59.4
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 3.5e-29 131.7 101 62.4
Hund03270 Selenicereus undatus HOM05D003482 ORTHO05D004194 3.9e-28 128.3 99 63.6
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 3.9e-28 128.3 103 61.2
Sabra18G0002200 Salix brachista HOM05D003482 ORTHO05D004194 8.6e-28 127.1 94 62.8
Sabra18G0009100 Salix brachista HOM05D003482 ORTHO05D004194 8.6e-28 127.1 94 62.8
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 1.1e-27 126.7 91 65.9
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 1.9e-27 125.9 101 59.4
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 3.3e-27 125.2 95 62.1
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 3.3e-27 125.2 105 55.2
Lsat_1_v5_gn_6_15541 Lactuca sativa HOM05D003482 ORTHO05D004194 9.6e-27 123.6 101 56.4
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 9.6e-27 123.6 101 57.4
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 2.1e-26 122.5 101 56.4
ECA233G2479 Erigeron canadensis HOM05D003482 ORTHO05D004194 1.4e-25 119.8 101 53.5
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 4.0e-25 118.2 101 57.4
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 6.9e-25 117.5 94 59.6
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 9.3e-22 107.1 102 50.0
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 9.3e-22 107.1 78 59.0
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 1.6e-21 106.3 104 51.0
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 3.3e-19 98.6 89 56.2
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 1.8e-17 92.8 83 53.0
Mapoly0011s0039 Marchantia polymorpha HOM05D000290 ORTHO05D008298 8.4e-07 57.4 62 45.2
Mapoly0054s0136 Marchantia polymorpha HOM05D000290 ORTHO05D004630 4.2e-06 55.1 94 29.8
Nn5g28931 Nelumbo nucifera HOM05D000290 ORTHO05D002418 5.5e-06 54.7 78 34.6
Dinv19505 Davidia involucrata HOM05D000290 ORTHO05D002418 7.1e-06 54.3 92 34.8
PSO755G0001 Papaver somniferum HOM05D003482 ORTHO05D004194 7.1e-06 54.3 40 62.5
Lj4g0021892 Lotus japonicus HOM05D000290 ORTHO05D002418 9.3e-06 53.9 102 34.3


User provided reference genes

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