Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26294 Sequoiadendron giganteum HOM05D004490 ORTHO05D005353 1.2e-168 596.7 359 100.0
Dinv41710 Davidia involucrata HOM05D004490 ORTHO05D005353 4.2e-52 209.5 266 48.9
Hma1.2p1_0363F.1_g136650 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 5.1e-50 202.6 269 47.2
Hma1.2p1_0363F.1_g136660 Hydrangea macrophylla HOM05D004490 ORTHO05D005353 5.1e-50 202.6 269 47.2
Sc23g0001210 Simmondsia chinensis HOM05D004490 ORTHO05D005353 5.1e-50 202.6 268 47.4
CSS0029963 Camellia sinensis var. sinensis HOM05D004490 ORTHO05D005353 6.7e-50 202.2 238 49.6
HanXRQChr10g0290501 Helianthus annuus HOM05D004490 ORTHO05D005353 5.6e-49 199.1 228 50.9
Peaxi162Scf00848g00115 Petunia axillaris HOM05D004490 ORTHO05D005353 2.8e-48 196.8 263 47.5
GSVIVG01034483001 Vitis vinifera HOM05D004490 ORTHO05D005353 1.1e-47 194.9 253 48.2
CARHR056930 Cardamine hirsuta HOM05D004490 ORTHO05D005353 1.4e-47 194.5 261 46.7
vmacro11670 Vaccinium macrocarpon HOM05D004490 ORTHO05D005353 1.8e-47 194.1 261 46.7
Solyc11g018670.3 Solanum lycopersicum HOM05D004490 ORTHO05D005353 2.4e-47 193.7 291 43.6
MSTRG.1522 Avicennia marina HOM05D004490 ORTHO05D005353 5.3e-47 192.6 234 48.3
Nn5g27710 Nelumbo nucifera HOM05D004490 ORTHO05D005353 2.6e-46 190.3 229 50.7
Carub.0002s1095 Capsella rubella HOM05D004490 ORTHO05D005353 3.4e-46 189.9 255 44.3
ECA234G1973 Erigeron canadensis HOM05D004490 ORTHO05D005353 3.4e-46 189.9 233 48.1
CDE08G1471 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 5.8e-46 189.1 243 49.4
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.3e-45 188.0 230 48.3
MELO3C024104.2 Cucumis melo HOM05D004490 ORTHO05D005353 1.7e-45 187.6 269 42.4
Gohir.A13G121400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.7e-45 187.6 228 46.9
Aqoxy2G03181 Aquilegia oxysepala HOM05D004490 ORTHO05D005353 2.9e-45 186.8 253 45.8
ClCG09G010540 Citrullus lanatus HOM05D004490 ORTHO05D005353 4.9e-45 186.0 268 41.8
Atru.chr12.1269 Acer truncatum HOM05D004490 ORTHO05D005353 6.5e-45 185.7 230 48.7
TWI63G0531 Tripterygium wilfordii HOM05D004490 ORTHO05D005353 6.5e-45 185.7 228 47.8
Manes.02G191800 Manihot esculenta HOM05D004490 ORTHO05D005353 8.4e-45 185.3 235 47.7
Cfa018184 Carpinus fangiana HOM05D004490 ORTHO05D005353 1.1e-44 184.9 253 46.2
Sopen11g009650 Solanum pennellii HOM05D004490 ORTHO05D005353 1.1e-44 184.9 275 43.3
THA.LOC104816311 Tarenaya hassleriana HOM05D004490 ORTHO05D005353 1.1e-44 184.9 235 47.7
TAR208G0002 Trochodendron aralioides HOM05D004490 ORTHO05D005353 1.1e-44 184.9 246 46.3
Nitab4.5_0002074g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 1.4e-44 184.5 286 42.7
AT1G65280 Arabidopsis thaliana HOM05D004490 ORTHO05D005353 1.9e-44 184.1 252 46.0
SalBow4G3000 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.9e-44 184.1 233 47.6
SalBow7G0993 Salvia bowleyana HOM05D004490 ORTHO05D005353 1.9e-44 184.1 233 47.6
Thecc.08G183200 Theobroma cacao HOM05D004490 ORTHO05D005353 2.5e-44 183.7 256 45.3
CsaV3_7G024020 Cucumis sativus L. HOM05D004490 ORTHO05D005353 3.2e-44 183.3 259 42.1
FAN07G2233 Fragaria x ananassa HOM05D004490 ORTHO05D005353 3.2e-44 183.3 254 46.5
AL2G20400 Arabidopsis lyrata HOM05D004490 ORTHO05D005353 4.2e-44 183.0 233 46.8
Migut.C01248 Erythranthe guttata HOM05D004490 ORTHO05D005353 4.2e-44 183.0 266 44.7
ATR1098G081 Amborella trichopoda HOM05D004490 ORTHO05D008312 5.5e-44 182.6 235 47.7
Thhalv10028527m.g Eutrema salsugineum HOM05D004490 ORTHO05D005353 5.5e-44 182.6 255 44.7
Ciclev10000724m.g Citrus clementina HOM05D004490 ORTHO05D005353 7.1e-44 182.2 246 45.5
EL10Ac1g00080 Beta vulgaris HOM05D004490 ORTHO05D005353 9.3e-44 181.8 231 49.8
Oeu039613.1 Olea europaea HOM05D004490 ORTHO05D005353 9.3e-44 181.8 253 46.6
Sed0010515 Sechium edule HOM05D004490 ORTHO05D005353 9.3e-44 181.8 254 42.1
Gorai.013G140400 Gossypium raimondii HOM05D004490 ORTHO05D005353 1.2e-43 181.4 256 44.1
RcHm_v2.0_Chr4g0398261 Rosa chinensis HOM05D004490 ORTHO05D005353 1.6e-43 181.0 230 48.3
Duzib177G0006 Durio zibethinus HOM05D004490 ORTHO05D005353 2.1e-43 180.6 242 45.5
Gohir.D13G125400 Gossypium hirsutum HOM05D004490 ORTHO05D005353 2.7e-43 180.3 228 46.5
Cc10_g11460 Coffea canephora HOM05D004490 ORTHO05D005353 3.5e-43 179.9 257 43.2
Potri.019G083700 Populus trichocarpa HOM05D004490 ORTHO05D005353 3.5e-43 179.9 242 47.5
Zm00001eb427930 Zea mays HOM05D004490 ORTHO05D005353 3.5e-43 179.9 252 44.4
CiPaw.16G061300 Carya illinoinensis HOM05D004490 ORTHO05D005353 4.6e-43 179.5 270 45.6
Sp6g08010 Schrenkiella parvula HOM05D004490 ORTHO05D005353 4.6e-43 179.5 236 47.0
A09p29500 Brassica napus HOM05D004490 ORTHO05D005353 6.0e-43 179.1 233 46.4
arahy.Tifrunner.gnm1.ann1.2Y7GNB Arachis hypogaea HOM05D004490 ORTHO05D005353 7.9e-43 178.7 234 45.3
Oeu021013.3 Olea europaea HOM05D004490 ORTHO05D005353 1.0e-42 178.3 283 42.4
CAN.G905.35 Capsicum annuum HOM05D004490 ORTHO05D005353 1.3e-42 177.9 257 43.6
arahy.Tifrunner.gnm1.ann1.90XUFN Arachis hypogaea HOM05D004490 ORTHO05D005353 1.8e-42 177.6 234 45.3
FvH4_4g06470 Fragaria vesca HOM05D004490 ORTHO05D005353 1.8e-42 177.6 230 47.4
FAN12G1529 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.8e-42 177.6 230 47.4
BraA09t38516Z Brassica rapa HOM05D004490 ORTHO05D005353 3.0e-42 176.8 245 44.1
Lj5g0002115 Lotus japonicus HOM05D004490 ORTHO05D005353 3.9e-42 176.4 230 45.2
Mapoly0003s0077 Marchantia polymorpha HOM05D004490 ORTHO05D005353 5.1e-42 176.0 230 47.4
Glyma.10G216200 Glycine max HOM05D004490 ORTHO05D005353 8.7e-42 175.3 251 43.4
BcaC04g20957 Brassica carinata HOM05D004490 ORTHO05D005353 1.1e-41 174.9 238 45.0
BolC9t56586H Brassica oleracea HOM05D004490 ORTHO05D005353 1.1e-41 174.9 238 45.0
Hund27085 Selenicereus undatus HOM05D004490 ORTHO05D005353 1.1e-41 174.9 260 43.8
Lj7A289G25 Lonicera japonica HOM05D004490 ORTHO05D005353 1.5e-41 174.5 230 44.3
Phvul.007G089700 Phaseolus vulgaris HOM05D004490 ORTHO05D005353 1.5e-41 174.5 232 45.7
VMungo0720G0360 Vigna mungo HOM05D004490 ORTHO05D005353 1.5e-41 174.5 230 46.1
CANSAT64G2929 Cannabis sativa HOM05D004490 ORTHO05D005353 1.9e-41 174.1 230 48.3
FAN17G1649 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.9e-41 174.1 247 45.7
Lalb_Chr21g0305821 Lupinus albus HOM05D004490 ORTHO05D005353 1.9e-41 174.1 253 45.8
Lsat_1_v5_gn_5_105541 Lactuca sativa HOM05D004490 ORTHO05D005353 2.5e-41 173.7 218 47.7
Sabra19G0095100 Salix brachista HOM05D004490 ORTHO05D005353 9.6e-41 171.8 283 41.3
PGR102G0893 Punica granatum HOM05D004490 ORTHO05D005353 1.3e-40 171.4 258 44.6
SGA_v2.0_scaffold118G32473 Striga asiatica HOM05D004490 ORTHO05D005353 1.6e-40 171.0 233 44.6
Eucgr.F04124 Eucalyptus grandis HOM05D004490 ORTHO05D005353 2.1e-40 170.6 272 41.5
Glyma.20G175700 Glycine max HOM05D004490 ORTHO05D005353 2.1e-40 170.6 230 44.3
Prupe.8G058000 Prunus persica HOM05D004490 ORTHO05D005353 2.1e-40 170.6 256 45.7
Os01g0521500 Oryza sativa ssp. japonica HOM05D004490 ORTHO05D005353 3.7e-40 169.9 251 42.6
AUR62022689 Chenopodium quinoa HOM05D004490 ORTHO05D005353 1.1e-39 168.3 207 49.8
Medtr1g096410 Medicago truncatula HOM05D004490 ORTHO05D005353 1.1e-39 168.3 232 44.4
Ah.05g178090 Amaranthus hybridus HOM05D004490 ORTHO05D005353 1.8e-39 167.5 209 47.8
PSO017G7136 Papaver somniferum HOM05D004490 ORTHO05D005353 1.8e-39 167.5 229 46.3
MD04G1003500 Malus domestica HOM05D004490 ORTHO05D005353 2.4e-39 167.2 257 44.0
Aa31LG9G14890 Aethionema arabicum HOM05D004490 ORTHO05D005353 3.1e-39 166.8 250 43.2
AUR62004649 Chenopodium quinoa HOM05D004490 ORTHO05D005353 3.1e-39 166.8 208 47.6
Rhsim11G0059700 Rhododendron simsii HOM05D004490 ORTHO05D005353 4.0e-39 166.4 211 47.9
Psat6g187400 Pisum sativum HOM05D004490 ORTHO05D005353 1.2e-38 164.9 235 43.4
Ca_10614_v3 Cicer arietinum L. HOM05D004490 ORTHO05D005353 5.8e-38 162.5 230 44.8
HPP92_020159 Vanilla planifolia HOM05D004490 ORTHO05D005353 5.8e-38 162.5 250 43.2
BcaB01g01408 Brassica carinata HOM05D004490 ORTHO05D005353 7.6e-38 162.2 241 42.3
HPP92_020178 Vanilla planifolia HOM05D004490 ORTHO05D005353 7.6e-38 162.2 245 41.6
PSO063G0599 Papaver somniferum HOM05D004490 ORTHO05D005353 1.0e-37 161.8 246 43.5
TPR.G8816 Trifolium pratense HOM05D004490 ORTHO05D005353 1.0e-37 161.8 240 43.3
QL02p033840 Quercus lobata HOM05D004490 ORTHO05D005353 5.5e-36 156.0 304 36.5
DCAR_014360 Daucus carota HOM05D004490 ORTHO05D005353 7.1e-36 155.6 236 41.5
FvH4_3g44966 Fragaria vesca HOM05D004490 ORTHO05D005353 2.5e-33 147.1 269 39.4
Pp3c14_7350 Physcomitrium patens HOM05D004490 ORTHO05D005353 3.3e-33 146.7 240 42.1
Haze_17934 Corylus avellana HOM05D004490 ORTHO05D005353 4.3e-33 146.4 254 41.7
FAN11G3016 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.1e-28 131.7 231 40.3
FAN25G1655 Fragaria x ananassa HOM05D004490 ORTHO05D005353 2.7e-27 127.1 231 37.7
EL10Ac1g00082 Beta vulgaris HOM05D004490 ORTHO05D005353 3.0e-26 123.6 98 64.3
FvH4_3g44892 Fragaria vesca HOM05D004490 ORTHO05D005353 3.9e-26 123.2 231 38.5
unitig_699.g19825 Utricularia gibba HOM05D004490 ORTHO05D005353 2.4e-23 114.0 275 32.7
RcHm_v2.0_Chr5g0081671 Rosa chinensis HOM05D004490 ORTHO05D005353 5.3e-23 112.8 267 33.3
AagrBONN_evm.TU.Sc2ySwM_228.3521 Anthoceros agrestis HOM05D004490 ORTHO05D005353 7.7e-22 109.0 207 38.2
FAN21G1156 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.7e-21 107.8 269 33.8
SHI09004 Sapria himalayana HOM05D004490 ORTHO05D005353 2.9e-21 107.1 91 60.4
Nitab4.5_0018466g0010 Nicotiana tabacum HOM05D004490 ORTHO05D005353 6.5e-21 105.9 235 36.6
SHI41020 Sapria himalayana HOM05D004490 ORTHO05D005353 5.7e-17 92.8 82 59.8
SHI54375 Sapria himalayana HOM05D004490 ORTHO05D005353 2.2e-16 90.9 85 55.3
RcHm_v2.0_Chr5g0082081 Rosa chinensis HOM05D004490 ORTHO05D005353 2.8e-16 90.5 211 35.1
Sopen01g003870 Solanum pennellii HOM05D004490 ORTHO05D005353 6.3e-16 89.4 77 64.9
FAN11G3432 Fragaria x ananassa HOM05D004490 ORTHO05D005353 1.8e-15 87.8 187 35.8
Prupe.3G081100 Prunus persica HOM05D004490 ORTHO05D005353 2.4e-15 87.4 97 54.6
Cpa.g.sc66.45 Carica papaya HOM05D004490 ORTHO05D005353 2.6e-14 84.0 139 39.6
BNapus_Darmor_BZH_scaffold_278p00030 Brassica napus HOM05D004490 ORTHO05D005353 4.5e-14 83.2 88 48.9
Cc00_g05790 Coffea canephora HOM05D004490 ORTHO05D005353 7.7e-14 82.4 145 39.3
CDE02G2953 Ceratophyllum demersum HOM05D004490 ORTHO05D005353 2.2e-13 80.9 88 50.0
CBR_g58400 Chara braunii HOM05D004490 ORTHO05D005353 6.5e-13 79.3 104 47.1
CiPaw.15G081800 Carya illinoinensis HOM05D004490 ORTHO05D005353 1.2e-11 75.1 243 30.9
FvH4_3g44932 Fragaria vesca HOM05D004490 ORTHO05D005353 2.1e-11 74.3 86 51.2
Nitab4.5_0000277g0020 Nicotiana tabacum HOM05D004490 ORTHO05D005353 2.7e-11 73.9 65 53.8
Pp3c27_3480 Physcomitrium patens HOM05D004490 ORTHO05D005353 3.6e-11 73.6 64 65.6
Gohir.A04G142550 Gossypium hirsutum HOM05D004490 ORTHO05D005353 1.0e-10 72.0 65 50.8
SHI09001 Sapria himalayana HOM05D004490 ORTHO05D005353 1.8e-10 71.2 65 50.8
FvH4_3g44931 Fragaria vesca HOM05D004490 ORTHO05D005353 1.2e-06 58.5 86 38.4
Cpa.g.sc66.44 Carica papaya HOM05D004490 ORTHO05D005353 2.6e-06 57.4 92 42.4
MCO12G010 Micromonas commoda HOM05D004490 ORTHO05D005353 7.7e-06 55.8 128 33.6
RcHm_v2.0_Chr5g0082701 Rosa chinensis HOM05D004490 ORTHO05D005353 7.7e-06 55.8 81 37.0


User provided reference genes

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