Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26273 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 1.1e-136 490.0 253 100.0
SEGI_24171 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 2.7e-130 468.8 253 96.4
TPR.G39971 Trifolium pratense HOM05D008204 ORTHO05D010378 4.4e-16 89.4 72 69.4
ATMG00650 Arabidopsis thaliana HOM05D008204 ORTHO05D010378 8.4e-15 85.1 67 71.6
CAN.G2446.2 Capsicum annuum HOM05D008204 ORTHO05D010378 8.4e-15 85.1 67 71.6
CAN.G2792.2 Capsicum annuum HOM05D008204 ORTHO05D010378 8.4e-15 85.1 67 71.6
BraSC48t46233Z Brassica rapa HOM05D008204 ORTHO05D010378 5.4e-14 82.4 67 70.1
BraSC48t46321Z Brassica rapa HOM05D008204 ORTHO05D010378 5.4e-14 82.4 67 70.1
CARHR283010 Cardamine hirsuta HOM05D008204 ORTHO05D010378 5.4e-14 82.4 67 70.1
Thhalv10023053m.g Eutrema salsugineum HOM05D008204 ORTHO05D010378 5.4e-14 82.4 67 70.1
C01p34800 Brassica napus HOM05D008204 ORTHO05D010378 1.6e-13 80.9 67 68.7
BolC1t03448H Brassica oleracea HOM05D008204 ORTHO05D010378 1.6e-13 80.9 67 68.7
CANSAT16G0035 Cannabis sativa HOM05D008204 ORTHO05D010378 2.3e-12 77.0 67 68.7
Sed0011989 Sechium edule HOM05D008204 ORTHO05D010378 2.3e-12 77.0 67 68.7
Sed0024014 Sechium edule HOM05D008204 ORTHO05D010378 2.3e-12 77.0 67 68.7
DCAR_032454 Daucus carota HOM05D008204 ORTHO05D010378 5.6e-11 72.4 57 73.7
HanXRQChr16g0504421 Helianthus annuus HOM05D008204 ORTHO05D010378 5.6e-11 72.4 57 73.7
HanXRQMTg0579141 Helianthus annuus HOM05D008204 ORTHO05D010378 5.6e-11 72.4 57 73.7
Potri.007G061661 Populus trichocarpa HOM05D008204 ORTHO05D010378 9.6e-11 71.6 67 65.7
Potri.007G062622 Populus trichocarpa HOM05D008204 ORTHO05D010378 9.6e-11 71.6 67 65.7
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.6e-10 70.9 66 62.1
Glyma.17G186100 Glycine max HOM05D008204 ORTHO05D010378 2.1e-10 70.5 57 71.9
Lalb_Chr00c21g0405851 Lupinus albus HOM05D008204 ORTHO05D010378 2.1e-10 70.5 57 71.9
Lalb_Chr00c24g0407001 Lupinus albus HOM05D008204 ORTHO05D010378 2.1e-10 70.5 57 71.9
Nn1g09977 Nelumbo nucifera HOM05D008204 ORTHO05D010378 2.8e-10 70.1 57 71.9
Nn1g10041 Nelumbo nucifera HOM05D008204 ORTHO05D010378 2.8e-10 70.1 57 71.9
RcHm_v2.0_MTg0498341 Rosa chinensis HOM05D008204 ORTHO05D010378 2.8e-10 70.1 57 71.9
Gorai.001G160700 Gossypium raimondii HOM05D008204 ORTHO05D010378 4.7e-10 69.3 57 71.9
SHI54418 Sapria himalayana HOM05D008204 ORTHO05D010378 4.7e-10 69.3 57 70.2
Ah.10g028140 Amaranthus hybridus HOM05D008204 ORTHO05D010378 6.2e-10 68.9 51 78.4
LjContig00439g0017375 Lotus japonicus HOM05D008204 ORTHO05D010378 8.1e-10 68.6 75 56.0
Aqoxy1G02968 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 1.4e-09 67.8 53 73.6
Aqoxy23s009 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 1.4e-09 67.8 53 73.6
HanXRQChr11g0327851 Helianthus annuus HOM05D008204 ORTHO05D010378 2.4e-09 67.0 57 70.2
arahy.Tifrunner.gnm1.ann1.13YUNC Arachis hypogaea HOM05D008204 ORTHO05D010378 3.1e-09 66.6 51 74.5
arahy.Tifrunner.gnm1.ann1.4CE1ET Arachis hypogaea HOM05D008204 ORTHO05D010378 3.1e-09 66.6 51 74.5
arahy.Tifrunner.gnm1.ann1.CN6S56 Arachis hypogaea HOM05D008204 ORTHO05D010378 3.1e-09 66.6 51 74.5
arahy.Tifrunner.gnm1.ann1.TNUC9A Arachis hypogaea HOM05D008204 ORTHO05D010378 3.1e-09 66.6 51 74.5
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 3.1e-09 66.6 51 74.5
Dinv06665 Davidia involucrata HOM05D008204 ORTHO05D010378 4.0e-09 66.2 51 74.5
HanXRQChr07g0188981 Helianthus annuus HOM05D008204 ORTHO05D010378 4.0e-09 66.2 57 68.4
SHI51809 Sapria himalayana HOM05D008204 ORTHO05D010378 4.0e-09 66.2 51 74.5
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 9.0e-09 65.1 51 72.5
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.0e-08 63.9 50 74.0
Aqoxy12s023 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 2.6e-08 63.5 50 74.0
Lsat_1_v5_gn_0_35040 Lactuca sativa HOM05D008204 ORTHO05D010378 2.6e-08 63.5 50 74.0
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.6e-08 63.5 50 74.0
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.6e-08 63.5 50 74.0
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 3.4e-08 63.2 50 74.0
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 7.6e-08 62.0 50 72.0
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 9.9e-08 61.6 50 72.0
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 4.9e-07 59.3 52 61.5
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 1.4e-06 57.8 43 72.1
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 2.4e-06 57.0 51 68.6


User provided reference genes

Program Settings