Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 6.1e-296 1020.0 494 100.0
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 9.0e-122 441.4 399 54.1
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.5e-121 440.7 344 59.3
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.9e-120 436.4 387 55.3
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 3.8e-120 436.0 344 58.7
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 8.4e-120 434.9 346 57.8
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.4e-119 434.1 344 57.3
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.4e-119 434.1 399 54.4
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.9e-119 433.7 389 53.7
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 7.1e-119 431.8 344 57.3
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 7.1e-119 431.8 344 57.3
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 7.1e-119 431.8 344 57.3
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 9.3e-119 431.4 343 57.1
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 9.3e-119 431.4 343 57.1
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 9.3e-119 431.4 399 54.1
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.6e-118 430.6 398 52.0
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.1e-118 430.3 398 52.0
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 2.1e-118 430.3 384 54.9
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 6.0e-118 428.7 454 49.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 6.0e-118 428.7 386 54.4
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 6.0e-118 428.7 344 56.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 7.9e-118 428.3 386 53.1
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 7.9e-118 428.3 475 48.8
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.0e-117 427.9 386 54.7
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.0e-117 427.9 374 55.6
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 3.0e-117 426.4 344 57.0
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 3.9e-117 426.0 394 52.0
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 3.9e-117 426.0 386 54.7
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 5.1e-117 425.6 344 55.5
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 8.7e-117 424.9 379 53.0
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-116 424.5 475 48.4
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 1.5e-116 424.1 472 48.3
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.9e-116 423.7 376 54.5
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.5e-116 423.3 459 48.4
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 2.5e-116 423.3 468 47.4
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 2.5e-116 423.3 346 56.1
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 3.3e-116 422.9 480 47.5
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 3.3e-116 422.9 394 53.6
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 3.3e-116 422.9 428 49.8
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 3.3e-116 422.9 405 51.4
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 3.3e-116 422.9 402 51.7
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.6e-116 422.2 480 47.3
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 7.4e-116 421.8 403 52.4
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 9.6e-116 421.4 374 54.3
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.6e-115 420.6 428 49.5
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.6e-115 420.6 345 56.8
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 2.1e-115 420.2 385 53.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.8e-115 419.9 473 48.0
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 3.7e-115 419.5 396 52.8
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 4.8e-115 419.1 457 49.7
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 6.2e-115 418.7 402 51.5
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.1e-115 418.3 360 54.7
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.1e-115 418.3 360 54.7
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.1e-114 417.9 342 55.3
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-114 417.9 463 48.8
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-114 417.5 342 55.3
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.4e-114 417.5 342 55.3
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.4e-114 417.5 466 48.7
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.8e-114 417.2 483 47.0
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.8e-114 417.2 376 53.5
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.4e-114 416.8 400 50.5
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.4e-114 416.8 463 48.6
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 2.4e-114 416.8 409 51.1
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 3.1e-114 416.4 346 54.6
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.1e-114 416.4 342 55.0
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.1e-114 416.4 342 55.0
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.9e-114 415.2 419 50.1
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.2e-113 414.5 403 49.6
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.5e-113 414.1 460 47.0
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 2.6e-113 413.3 467 47.3
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.4e-112 408.7 426 49.5
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 8.4e-112 408.3 402 49.8
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.2e-111 406.4 354 53.1
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 7.1e-111 405.2 420 48.6
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 7.1e-111 405.2 387 51.7
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 9.3e-111 404.8 442 48.2
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 9.3e-111 404.8 427 47.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 2.1e-110 403.7 476 47.1
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 4.6e-110 402.5 421 48.0
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 4.6e-110 402.5 423 48.2
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 1.8e-109 400.6 428 48.4
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 5.1e-109 399.1 399 50.1
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 5.1e-109 399.1 389 51.2
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 6.7e-109 398.7 380 51.8
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 6.7e-109 398.7 462 46.3
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 8.7e-109 398.3 337 55.8
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 8.7e-109 398.3 462 46.3
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 5.6e-108 395.6 488 44.5
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.3e-107 394.4 426 47.4
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.2e-105 387.9 328 55.2
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 1.5e-105 387.5 343 53.1
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 3.8e-104 382.9 344 51.7
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.1e-103 381.3 344 52.3
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 4.2e-103 379.4 491 42.4
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 5.5e-103 379.0 429 45.7
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 7.9e-102 375.2 399 47.6
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.3e-101 374.4 388 49.0
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.6e-99 367.5 347 51.3
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 2.2e-99 367.1 456 44.3
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 3.1e-98 363.2 371 47.2
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 5.9e-97 359.0 398 44.5
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.8e-96 356.3 419 44.9
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.2e-95 352.8 299 55.5
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 3.6e-94 349.7 343 49.3
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 9.7e-92 341.7 297 54.2
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 2.4e-90 337.0 333 48.0
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.2e-81 308.1 462 39.4
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 3.8e-72 276.6 216 58.8
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 2.9e-35 154.1 120 60.0
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 8.3e-35 152.5 197 42.6
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 4.9e-27 126.7 322 29.5
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.2e-25 122.1 138 40.6
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 2.9e-11 74.3 60 53.3
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 1.6e-09 68.6 87 42.5
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 7.3e-07 59.7 59 47.5
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 1.6e-06 58.5 57 40.4


User provided reference genes

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