Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26165 Sequoiadendron giganteum HOM05D006405 ORTHO05D007943 5.2e-64 247.7 134 100.0
SEGI_03053 Sequoiadendron giganteum HOM05D006405 ORTHO05D007943 4.3e-26 121.7 85 84.7
SEGI_33838 Sequoiadendron giganteum HOM05D000068 ORTHO05D000084 1.2e-15 87.0 52 82.7
Eucgr.C01102 Eucalyptus grandis HOM05D006405 ORTHO05D007943 1.7e-11 73.2 74 52.7
Aqoxy7G01949 Aquilegia oxysepala HOM05D006405 ORTHO05D007943 2.1e-09 66.2 82 42.7
CSS0000400 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 2.8e-09 65.9 75 44.0
CSS0009020 Camellia sinensis var. sinensis HOM05D006405 ORTHO05D007943 2.8e-09 65.9 75 44.0
PGR142G3933 Punica granatum HOM05D006405 ORTHO05D007943 2.8e-09 65.9 71 47.9
Lalb_Chr23g0275181 Lupinus albus HOM05D006405 ORTHO05D007943 1.1e-08 63.9 72 44.4
Potri.018G074100 Populus trichocarpa HOM05D006405 ORTHO05D007943 1.4e-08 63.5 74 43.2
TWI32G1134 Tripterygium wilfordii HOM05D006405 ORTHO05D007943 1.4e-08 63.5 72 48.6
Lsat_1_v5_gn_7_42660 Lactuca sativa HOM05D006405 ORTHO05D007943 3.1e-08 62.4 75 45.3
Thecc.09G118300 Theobroma cacao HOM05D006405 ORTHO05D007943 4.0e-08 62.0 74 43.2
TAR636G3075 Trochodendron aralioides HOM05D006405 ORTHO05D007943 4.0e-08 62.0 74 43.2
Haze_25659 Corylus avellana HOM05D006405 ORTHO05D007943 5.2e-08 61.6 74 44.6
Medtr4g113150 Medicago truncatula HOM05D006405 ORTHO05D007943 5.2e-08 61.6 77 40.3
Glyma.05G011400 Glycine max HOM05D006405 ORTHO05D007943 1.2e-07 60.5 87 41.4
QL02p086599 Quercus lobata HOM05D006405 ORTHO05D007943 1.2e-07 60.5 74 44.6
GSVIVG01015463001 Vitis vinifera HOM05D006405 ORTHO05D007943 1.5e-07 60.1 80 38.8
Psat4g042200 Pisum sativum HOM05D006405 ORTHO05D007943 3.4e-07 58.9 72 38.9
Ciclev10008764m.g Citrus clementina HOM05D006405 ORTHO05D007943 4.4e-07 58.5 74 40.5
MSTRG.10623 Avicennia marina HOM05D006405 ORTHO05D007943 5.8e-07 58.2 75 41.3
MELO3C004534.2 Cucumis melo HOM05D006405 ORTHO05D007943 5.8e-07 58.2 74 40.5
Lj7C637T6 Lonicera japonica HOM05D006405 ORTHO05D007943 5.8e-07 58.2 80 37.5
arahy.Tifrunner.gnm1.ann1.K7UYF7 Arachis hypogaea HOM05D006405 ORTHO05D007943 7.6e-07 57.8 81 40.7
CiPaw.03G237400 Carya illinoinensis HOM05D006405 ORTHO05D007943 9.9e-07 57.4 74 43.2
Migut.K00484 Erythranthe guttata HOM05D006405 ORTHO05D007943 9.9e-07 57.4 75 40.0
TPR.G26771 Trifolium pratense HOM05D006405 ORTHO05D007943 9.9e-07 57.4 77 37.7
MD15G1180600 Malus domestica HOM05D006405 ORTHO05D007943 1.7e-06 56.6 79 41.8
vmacro23165 Vaccinium macrocarpon HOM05D006405 ORTHO05D007943 1.7e-06 56.6 68 45.6
Actinidia26418 Actinidia chinensis HOM05D000063 ORTHO05D001671 2.2e-06 56.2 58 48.3
arahy.Tifrunner.gnm1.ann1.1782J0 Arachis hypogaea HOM05D006405 ORTHO05D007943 2.2e-06 56.2 81 39.5
Duzib150G0454 Durio zibethinus HOM05D006405 ORTHO05D007943 3.8e-06 55.5 70 40.0


User provided reference genes

Program Settings