Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 4.3e-242 840.9 415 100.0
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.4e-139 500.4 314 74.2
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 1.1e-112 411.0 366 56.3
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 7.1e-112 408.3 276 68.5
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 4.6e-111 405.6 245 75.1
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 8.6e-110 401.4 246 74.0
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 5.6e-109 398.7 256 69.9
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 1.6e-108 397.1 233 75.1
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 2.1e-108 396.7 234 75.6
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 2.8e-108 396.4 229 75.5
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 8.1e-108 394.8 243 72.8
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 1.1e-107 394.4 229 76.9
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 2.4e-107 393.3 237 73.8
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 3.1e-107 392.9 241 73.0
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 4.0e-107 392.5 237 73.8
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 4.0e-107 392.5 237 73.8
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 5.2e-107 392.1 224 77.7
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 5.2e-107 392.1 239 72.8
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 6.9e-107 391.7 240 73.8
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 6.9e-107 391.7 227 74.4
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 8.9e-107 391.3 237 73.4
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 8.9e-107 391.3 250 69.6
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 8.9e-107 391.3 229 74.7
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 8.9e-107 391.3 243 72.0
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 1.5e-106 390.6 226 75.2
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 1.5e-106 390.6 226 75.2
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 2.0e-106 390.2 238 71.8
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.0e-106 390.2 237 73.4
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 2.6e-106 389.8 239 73.6
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 2.6e-106 389.8 244 70.5
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 2.6e-106 389.8 268 68.7
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 2.6e-106 389.8 269 68.4
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 3.4e-106 389.4 243 68.7
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 3.4e-106 389.4 244 70.9
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 5.8e-106 388.7 248 71.0
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 5.8e-106 388.7 239 72.0
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 7.6e-106 388.3 263 66.9
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 7.6e-106 388.3 237 72.2
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 7.6e-106 388.3 248 71.4
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 7.6e-106 388.3 239 69.9
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 7.6e-106 388.3 234 73.5
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 9.9e-106 387.9 229 73.8
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 9.9e-106 387.9 256 68.8
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 9.9e-106 387.9 256 68.8
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 9.9e-106 387.9 291 62.2
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 9.9e-106 387.9 224 76.8
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.3e-105 387.5 273 66.3
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 1.3e-105 387.5 241 72.6
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 1.3e-105 387.5 240 71.7
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 1.3e-105 387.5 223 75.8
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 1.7e-105 387.1 248 68.1
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 2.2e-105 386.7 258 67.8
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.2e-105 386.7 249 70.7
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 2.2e-105 386.7 241 70.5
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 2.2e-105 386.7 248 70.2
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 2.2e-105 386.7 228 74.1
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 2.2e-105 386.7 238 71.4
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 2.2e-105 386.7 252 70.2
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 2.9e-105 386.3 239 72.0
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 3.8e-105 386.0 258 67.8
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 3.8e-105 386.0 256 68.4
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 3.8e-105 386.0 237 71.3
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 3.8e-105 386.0 242 71.1
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 3.8e-105 386.0 240 69.2
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 4.9e-105 385.6 257 66.5
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 4.9e-105 385.6 241 71.4
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 4.9e-105 385.6 229 72.1
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 4.9e-105 385.6 235 73.6
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 4.9e-105 385.6 243 71.6
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 6.4e-105 385.2 244 68.4
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 6.4e-105 385.2 249 70.3
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 8.4e-105 384.8 236 72.0
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 8.4e-105 384.8 234 73.1
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 1.1e-104 384.4 258 65.9
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 1.1e-104 384.4 239 70.7
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 1.1e-104 384.4 265 65.3
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.4e-104 384.0 230 71.3
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 1.9e-104 383.6 309 56.3
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 2.4e-104 383.3 230 73.9
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.4e-104 383.3 249 69.5
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.4e-104 383.3 241 69.7
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.4e-104 383.3 241 69.7
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 2.4e-104 383.3 229 74.2
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 3.2e-104 382.9 255 69.8
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 3.2e-104 382.9 234 71.8
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 3.2e-104 382.9 224 75.4
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 3.2e-104 382.9 227 71.8
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 4.2e-104 382.5 249 69.5
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 5.4e-104 382.1 229 72.5
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 5.4e-104 382.1 229 73.4
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 5.4e-104 382.1 241 69.3
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 7.1e-104 381.7 248 69.0
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 7.1e-104 381.7 264 65.2
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 7.1e-104 381.7 262 65.3
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 7.1e-104 381.7 226 74.8
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 7.1e-104 381.7 222 75.2
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 9.3e-104 381.3 227 72.2
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 9.3e-104 381.3 229 72.9
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 9.3e-104 381.3 234 71.4
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 9.3e-104 381.3 233 71.7
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 9.3e-104 381.3 227 71.4
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.2e-103 380.9 261 67.0
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 2.1e-103 380.2 227 71.4
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 2.7e-103 379.8 242 71.1
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 3.5e-103 379.4 229 71.6
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 3.5e-103 379.4 243 70.0
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 3.5e-103 379.4 243 70.0
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 4.6e-103 379.0 253 68.4
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 4.6e-103 379.0 262 64.9
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 6.0e-103 378.6 241 68.9
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 6.0e-103 378.6 241 68.9
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 7.8e-103 378.3 236 70.3
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 7.8e-103 378.3 224 74.6
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 1.0e-102 377.9 244 68.9
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 1.3e-102 377.5 228 73.2
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 1.3e-102 377.5 228 70.2
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 1.3e-102 377.5 220 74.1
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 1.7e-102 377.1 229 72.1
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 2.3e-102 376.7 244 68.0
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 2.3e-102 376.7 228 73.2
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 2.3e-102 376.7 228 73.2
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 3.9e-102 375.9 228 72.8
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 3.9e-102 375.9 233 70.4
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 3.9e-102 375.9 236 70.3
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 3.9e-102 375.9 226 72.1
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 5.1e-102 375.6 229 71.2
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 5.1e-102 375.6 228 72.4
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 5.1e-102 375.6 230 71.3
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 1.1e-101 374.4 229 72.1
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 1.1e-101 374.4 227 72.2
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 3.3e-101 372.9 227 70.5
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 3.3e-101 372.9 226 70.8
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 4.3e-101 372.5 242 69.0
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 1.3e-100 370.9 230 69.1
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 1.6e-100 370.5 229 71.6
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 2.8e-100 369.8 230 70.9
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 3.6e-100 369.4 230 70.4
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 3.6e-100 369.4 220 72.7
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 6.2e-100 368.6 224 71.4
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 1.1e-99 367.9 224 71.4
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 1.1e-99 367.9 224 71.4
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 3.4e-98 362.8 229 69.4
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 7.6e-98 361.7 233 70.8
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 9.9e-98 361.3 267 63.3
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 1.7e-97 360.5 242 67.8
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 5.1e-94 349.0 243 64.6
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 6.7e-94 348.6 266 61.3
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 3.3e-93 346.3 231 67.5
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 2.6e-90 336.7 188 79.3
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 9.3e-88 328.2 281 57.3
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 6.3e-76 288.9 239 58.2
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 4.1e-75 286.2 188 70.7
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 1.2e-74 284.6 160 77.5
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 4.6e-71 272.7 248 55.2
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 1.3e-68 264.6 154 74.0
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 1.4e-67 261.2 149 76.5
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 2.3e-54 217.2 232 45.3
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.2e-41 174.1 230 39.1
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.4e-38 164.9 221 43.4
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 2.6e-37 160.6 89 80.9
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 5.7e-29 132.9 90 67.8
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 2.6e-21 107.5 145 42.1
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 2.6e-21 107.5 115 49.6
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 5.4e-11 73.2 66 56.1
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 2.7e-10 70.9 51 56.9


User provided reference genes

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