Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26045 Sequoiadendron giganteum HOM05D005214 ORTHO05D005861 2.6e-46 188.3 95 100.0
Nn8g40789 Nelumbo nucifera HOM05D005214 ORTHO05D005861 4.5e-14 81.3 50 74.0
ATR0743G060 Amborella trichopoda HOM05D005214 ORTHO05D005861 7.7e-14 80.5 50 68.0
TAR362G1097 Trochodendron aralioides HOM05D005214 ORTHO05D005861 7.7e-14 80.5 50 70.0
Zm00001eb168260 Zea mays HOM05D005214 ORTHO05D005861 7.7e-14 80.5 50 72.0
Aa31LG11G9400 Aethionema arabicum HOM05D005214 ORTHO05D005861 1.0e-13 80.1 50 76.0
Eucgr.H04504 Eucalyptus grandis HOM05D005214 ORTHO05D005861 1.3e-13 79.7 50 72.0
MSTRG.27985 Avicennia marina HOM05D005214 ORTHO05D005861 2.3e-13 79.0 50 72.0
Mapoly0047s0084 Marchantia polymorpha HOM05D005214 ORTHO05D005861 2.3e-13 79.0 50 68.0
SGA_v2.0_scaffold80G25806 Striga asiatica HOM05D005214 ORTHO05D005861 2.3e-13 79.0 52 69.2
Migut.N01980 Erythranthe guttata HOM05D005214 ORTHO05D005861 2.9e-13 78.6 50 70.0
Migut.N02017 Erythranthe guttata HOM05D005214 ORTHO05D005861 2.9e-13 78.6 50 70.0
Lalb_Chr18g0045711 Lupinus albus HOM05D005214 ORTHO05D005861 2.9e-13 78.6 50 70.0
Os11g0246600 Oryza sativa ssp. japonica HOM05D005214 ORTHO05D005861 2.9e-13 78.6 50 68.0
AUR62000783 Chenopodium quinoa HOM05D005214 ORTHO05D005861 3.8e-13 78.2 50 72.0
Manes.08G119000 Manihot esculenta HOM05D005214 ORTHO05D005861 3.8e-13 78.2 50 70.0
Hund07090 Selenicereus undatus HOM05D005214 ORTHO05D005861 3.8e-13 78.2 50 72.0
Dinv40313 Davidia involucrata HOM05D005214 ORTHO05D005861 5.0e-13 77.8 50 70.0
Oeu040762.1 Olea europaea HOM05D005214 ORTHO05D005861 5.0e-13 77.8 50 68.0
QL03p011667 Quercus lobata HOM05D005214 ORTHO05D005861 5.0e-13 77.8 50 66.0
QL03p021693 Quercus lobata HOM05D005214 ORTHO05D005861 5.0e-13 77.8 50 66.0
Sp2g20820 Schrenkiella parvula HOM05D005214 ORTHO05D005861 5.0e-13 77.8 50 72.0
CARHR186180 Cardamine hirsuta HOM05D005214 ORTHO05D005861 6.5e-13 77.4 50 68.0
TWI12G0218 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 6.5e-13 77.4 50 68.0
EL10Ac4g09934 Beta vulgaris HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 70.0
CiPaw.07G020400 Carya illinoinensis HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 70.0
CDE09G0722 Ceratophyllum demersum HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 64.0
FvH4_6g06420 Fragaria vesca HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 66.0
FAN05G5708 Fragaria x ananassa HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 66.0
Hma1.2p1_1212F.1_g267370 Hydrangea macrophylla HOM05D005214 ORTHO05D005861 8.6e-13 77.0 51 64.7
Lj1g0009363 Lotus japonicus HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 68.0
RcHm_v2.0_Chr3g0455481 Rosa chinensis HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 66.0
unitig_699.g19247 Utricularia gibba HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 66.0
GSVIVG01031122001 Vitis vinifera HOM05D005214 ORTHO05D005861 8.6e-13 77.0 50 70.0
AUR62005185 Chenopodium quinoa HOM05D005214 ORTHO05D005861 1.1e-12 76.6 50 70.0
Ciclev10001167m.g Citrus clementina HOM05D005214 ORTHO05D005861 1.1e-12 76.6 50 66.0
AL6G39370 Arabidopsis lyrata HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
AT5G27660 Arabidopsis thaliana HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
BcaNung04541 Brassica carinata HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
A06p37390 Brassica napus HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
C07p40960 Brassica napus HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
BolC7t44627H Brassica oleracea HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
BraA06t26663Z Brassica rapa HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
Carub.0006s2493 Capsella rubella HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
CBR_g39175 Chara braunii HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 60.0
Thhalv10004245m.g Eutrema salsugineum HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
MD12G1215600 Malus domestica HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
Nitab4.5_0000524g0010 Nicotiana tabacum HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
Nitab4.5_0002144g0030 Nicotiana tabacum HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
PSO541G2582 Papaver somniferum HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
PSO675G4608 Papaver somniferum HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
THA.LOC104802800 Tarenaya hassleriana HOM05D005214 ORTHO05D005861 1.5e-12 76.3 50 68.0
Actinidia05683 Actinidia chinensis HOM05D005214 ORTHO05D005861 1.9e-12 75.9 50 68.0
Lj9A119G25 Lonicera japonica HOM05D005214 ORTHO05D005861 1.9e-12 75.9 50 64.0
Medtr7g113170 Medicago truncatula HOM05D005214 ORTHO05D005861 1.9e-12 75.9 50 66.0
Pp3c6_6410 Physcomitrium patens HOM05D005214 ORTHO05D005861 1.9e-12 75.9 50 68.0
SMO364G0425 Selaginella moellendorffii HOM05D005214 ORTHO05D005861 1.9e-12 75.9 50 58.0
Cfa006617 Carpinus fangiana HOM05D005214 ORTHO05D005861 2.5e-12 75.5 50 66.0
Duzib128G1190 Durio zibethinus HOM05D005214 ORTHO05D005861 2.5e-12 75.5 50 66.0
FAN02G3954 Fragaria x ananassa HOM05D005214 ORTHO05D005861 2.5e-12 75.5 50 64.0
Prupe.6G322200 Prunus persica HOM05D005214 ORTHO05D005861 2.5e-12 75.5 50 66.0
Atru.chr2.17 Acer truncatum HOM05D005214 ORTHO05D005861 3.2e-12 75.1 51 62.7
CANSAT54G2509 Cannabis sativa HOM05D005214 ORTHO05D005861 3.2e-12 75.1 50 68.0
TPR.G33205 Trifolium pratense HOM05D005214 ORTHO05D005861 3.2e-12 75.1 50 66.0
Aqoxy2G03015 Aquilegia oxysepala HOM05D005214 ORTHO05D005861 4.2e-12 74.7 51 64.7
CAN.G619.10 Capsicum annuum HOM05D005214 ORTHO05D005861 4.2e-12 74.7 50 68.0
Haze_04156 Corylus avellana HOM05D005214 ORTHO05D007291 4.2e-12 74.7 50 66.0
Peaxi162Scf00849g00006 Petunia axillaris HOM05D005214 ORTHO05D005861 4.2e-12 74.7 50 66.0
Potri.013G018300 Populus trichocarpa HOM05D005214 ORTHO05D005861 4.2e-12 74.7 50 64.0
Sabra13G0021100 Salix brachista HOM05D005214 ORTHO05D005861 4.2e-12 74.7 50 64.0
arahy.Tifrunner.gnm1.ann1.0P9F65 Arachis hypogaea HOM05D005214 ORTHO05D005861 5.5e-12 74.3 50 64.0
arahy.Tifrunner.gnm1.ann1.P1V9IM Arachis hypogaea HOM05D005214 ORTHO05D005861 5.5e-12 74.3 50 64.0
Gohir.A08G209100 Gossypium hirsutum HOM05D005214 ORTHO05D005861 5.5e-12 74.3 50 66.0
Gohir.D08G226000 Gossypium hirsutum HOM05D005214 ORTHO05D005861 5.5e-12 74.3 50 66.0
Gorai.004G240000 Gossypium raimondii HOM05D005214 ORTHO05D005861 5.5e-12 74.3 50 66.0
MBI07_g30867_MAGBIO Magnolia biondii HOM05D005214 ORTHO05D005861 5.5e-12 74.3 50 62.0
Psat0s545g0120 Pisum sativum HOM05D005214 ORTHO05D005861 5.5e-12 74.3 50 64.0
CSS0000343 Camellia sinensis var. sinensis HOM05D005214 ORTHO05D005861 7.2e-12 73.9 51 62.7
Ca_05806_v3 Cicer arietinum L. HOM05D005214 ORTHO05D005861 7.2e-12 73.9 50 64.0
COL.COLO4_10501 Corchorus olitorius HOM05D005214 ORTHO05D005861 7.2e-12 73.9 48 68.8
DCAR_022150 Daucus carota HOM05D005214 ORTHO05D005861 7.2e-12 73.9 50 68.0
ECA236G2130 Erigeron canadensis HOM05D005214 ORTHO05D005861 7.2e-12 73.9 50 64.0
FvH4_7g05300 Fragaria vesca HOM05D005214 ORTHO05D005861 7.2e-12 73.9 50 64.0
SalBow3G0885 Salvia bowleyana HOM05D005214 ORTHO05D005861 7.2e-12 73.9 50 62.0
Cpa.g.sc48.81 Carica papaya HOM05D005214 ORTHO05D005861 9.5e-12 73.6 50 64.0
HanXRQChr11g0339491 Helianthus annuus HOM05D005214 ORTHO05D005861 9.5e-12 73.6 50 64.0
Thecc.05G311500 Theobroma cacao HOM05D005214 ORTHO05D005861 9.5e-12 73.6 50 62.0
Glyma.19G234200 Glycine max HOM05D005214 ORTHO05D005861 1.2e-11 73.2 50 62.0
Phvul.006G090500 Phaseolus vulgaris HOM05D005214 ORTHO05D005861 1.6e-11 72.8 50 60.0
Rhsim07G0186700 Rhododendron simsii HOM05D005214 ORTHO05D005861 1.6e-11 72.8 50 64.0
TWI12G0067 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 1.6e-11 72.8 48 64.6
TWI12G1447 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 1.6e-11 72.8 50 60.0
vmacro04966 Vaccinium macrocarpon HOM05D005214 ORTHO05D005861 1.6e-11 72.8 50 64.0
MD04G1201900 Malus domestica HOM05D005214 ORTHO05D005861 2.8e-11 72.0 50 64.0
VMungo0540G0352 Vigna mungo HOM05D005214 ORTHO05D005861 2.8e-11 72.0 50 60.0
CsaV3_2G006580 Cucumis sativus L. HOM05D005214 ORTHO05D005861 3.6e-11 71.6 50 68.0
Sed0006034 Sechium edule HOM05D005214 ORTHO05D005861 3.6e-11 71.6 50 68.0
ClCG02G015500 Citrullus lanatus HOM05D005214 ORTHO05D005861 4.7e-11 71.2 50 68.0
MELO3C004228.2 Cucumis melo HOM05D005214 ORTHO05D005861 4.7e-11 71.2 50 68.0
FAN17G2752 Fragaria x ananassa HOM05D005214 ORTHO05D005861 4.7e-11 71.2 50 60.0
Lj5A436G22 Lonicera japonica HOM05D005214 ORTHO05D005861 6.1e-11 70.9 49 65.3
TWI12G0439 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 6.1e-11 70.9 50 62.0
Thecc.05G311600 Theobroma cacao HOM05D005214 ORTHO05D005861 8.0e-11 70.5 44 68.2
FAN14G2055 Fragaria x ananassa HOM05D005214 ORTHO05D005861 1.4e-10 69.7 50 58.0
Cc00_g10460 Coffea canephora HOM05D005214 ORTHO05D005861 2.3e-10 68.9 50 60.0
Haze_04157 Corylus avellana HOM05D005214 ORTHO05D005861 3.0e-10 68.6 44 68.2
AagrBONN_evm.TU.Sc2ySwM_228.3758 Anthoceros agrestis HOM05D005214 ORTHO05D005861 5.2e-10 67.8 50 64.0
Hma1.2p1_2820F.1_g329010 Hydrangea macrophylla HOM05D000081 ORTHO05D000036 5.2e-10 67.8 64 53.1
Lj1g0025562 Lotus japonicus HOM05D005214 ORTHO05D005861 5.2e-10 67.8 52 59.6
FvH4_6g06410 Fragaria vesca HOM05D005214 ORTHO05D005861 6.8e-10 67.4 50 56.0
CSS0006401 Camellia sinensis var. sinensis HOM05D005214 ORTHO05D005861 4.4e-09 64.7 63 54.0
TWI12G0716 Tripterygium wilfordii HOM05D005214 ORTHO05D005861 9.8e-09 63.5 50 60.0
CSS0021432 Camellia sinensis var. sinensis HOM05D005214 ORTHO05D005861 2.2e-08 62.4 64 51.6
PRCOL_00001746 Prasinoderma coloniale HOM05D005214 ORTHO05D005861 1.4e-07 59.7 50 52.0
FAN03G0660 Fragaria x ananassa HOM05D005214 ORTHO05D005861 7.0e-07 57.4 41 58.5
Hma1.2p1_0986F.1_g244420 Hydrangea macrophylla HOM05D000516 ORTHO05D005861 2.0e-06 55.8 72 44.4
Pp3s30_1210 Physcomitrium patens HOM05D001104 ORTHO05D311759 2.0e-06 55.8 53 49.1


User provided reference genes

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