Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26018 Sequoiadendron giganteum HOM05D000198 ORTHO05D006356 2.0e-79 298.9 140 100.0
SEGI_22449 Sequoiadendron giganteum HOM05D000198 ORTHO05D006356 4.2e-40 168.3 91 85.7
COL.COLO4_34626 Corchorus olitorius HOM05D000198 ORTHO05D006356 5.1e-38 161.4 88 81.8
PSO170G3445 Papaver somniferum HOM05D000198 ORTHO05D006356 8.7e-38 160.6 88 79.5
PSO357G0208 Papaver somniferum HOM05D000198 ORTHO05D006356 8.7e-38 160.6 88 79.5
Ciclev10004594m.g Citrus clementina HOM05D000198 ORTHO05D006356 1.1e-37 160.2 88 80.7
Gohir.A02G054100 Gossypium hirsutum HOM05D000198 ORTHO05D006356 1.1e-37 160.2 88 79.5
Nn4g25579 Nelumbo nucifera HOM05D000198 ORTHO05D006356 1.1e-37 160.2 88 79.5
Aqoxy5G02589 Aquilegia oxysepala HOM05D000198 ORTHO05D006356 1.5e-37 159.8 88 79.5
Cfa015321 Carpinus fangiana HOM05D000198 ORTHO05D006356 1.9e-37 159.5 88 79.5
MD13G1155400 Malus domestica HOM05D000198 ORTHO05D006356 1.9e-37 159.5 88 79.5
MD16G1154800 Malus domestica HOM05D000198 ORTHO05D006356 1.9e-37 159.5 88 78.4
PGR004G0803 Punica granatum HOM05D000198 ORTHO05D006356 1.9e-37 159.5 88 81.8
QL06p011923 Quercus lobata HOM05D000198 ORTHO05D006356 1.9e-37 159.5 88 79.5
HPP92_001926 Vanilla planifolia HOM05D005498 ORTHO05D006356 1.9e-37 159.5 88 76.1
ATR0796G341 Amborella trichopoda HOM05D000198 ORTHO05D006356 4.3e-37 158.3 88 77.3
Thecc.04G299600 Theobroma cacao HOM05D000198 ORTHO05D006356 4.3e-37 158.3 88 77.3
Eucgr.H04040 Eucalyptus grandis HOM05D000198 ORTHO05D006356 5.6e-37 157.9 81 85.2
Gohir.D02G059100 Gossypium hirsutum HOM05D000198 ORTHO05D006356 5.6e-37 157.9 88 78.4
Gorai.005G066700 Gossypium raimondii HOM05D000198 ORTHO05D006356 5.6e-37 157.9 88 78.4
Nitab4.5_0002150g0150 Nicotiana tabacum HOM05D000198 ORTHO05D006356 5.6e-37 157.9 88 79.5
Prupe.1G118500 Prunus persica HOM05D000198 ORTHO05D006356 5.6e-37 157.9 88 78.4
Rhsim04G0235300 Rhododendron simsii HOM05D000198 ORTHO05D006356 5.6e-37 157.9 88 77.3
TAR636G3353 Trochodendron aralioides HOM05D000198 ORTHO05D006356 5.6e-37 157.9 88 78.4
Hund03122 Selenicereus undatus HOM05D000198 ORTHO05D006356 7.3e-37 157.5 81 82.7
Aa31LG5G17230 Aethionema arabicum HOM05D000198 ORTHO05D006356 9.6e-37 157.1 81 86.4
Ca_01850_v3 Cicer arietinum L. HOM05D000198 ORTHO05D006356 9.6e-37 157.1 88 78.4
MBI18_g32020_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D006356 9.6e-37 157.1 88 78.4
Medtr2g034160 Medicago truncatula HOM05D000198 ORTHO05D006356 9.6e-37 157.1 88 78.4
Actinidia15605 Actinidia chinensis HOM05D000198 ORTHO05D006356 1.3e-36 156.8 88 78.4
CAN.G484.59 Capsicum annuum HOM05D000198 ORTHO05D006356 1.3e-36 156.8 88 77.3
Haze_01293 Corylus avellana HOM05D000198 ORTHO05D006356 1.3e-36 156.8 88 78.4
Manes.15G004800 Manihot esculenta HOM05D000198 ORTHO05D006356 1.3e-36 156.8 88 78.4
Nitab4.5_0013613g0020 Nicotiana tabacum HOM05D000198 ORTHO05D006356 1.3e-36 156.8 89 77.5
TWI53G2032 Tripterygium wilfordii HOM05D000198 ORTHO05D006356 1.3e-36 156.8 81 85.2
TAR107G0002 Trochodendron aralioides HOM05D000198 ORTHO05D006356 1.3e-36 156.8 88 77.3
AUR62016198 Chenopodium quinoa HOM05D000198 ORTHO05D006356 1.6e-36 156.4 88 76.1
Peaxi162Scf00120g00020 Petunia axillaris HOM05D000198 ORTHO05D006356 1.6e-36 156.4 88 77.3
Solyc12g099290.2 Solanum lycopersicum HOM05D000198 ORTHO05D006356 1.6e-36 156.4 88 76.1
Sopen12g033970 Solanum pennellii HOM05D000198 ORTHO05D006356 1.6e-36 156.4 88 76.1
EL10Ac3g05491 Beta vulgaris HOM05D000198 ORTHO05D006356 2.1e-36 156.0 88 77.3
AUR62039290 Chenopodium quinoa HOM05D000198 ORTHO05D006356 2.1e-36 156.0 88 76.1
Duzib212G0663 Durio zibethinus HOM05D000198 ORTHO05D006356 2.1e-36 156.0 97 74.2
Glyma.09G036000 Glycine max HOM05D000198 ORTHO05D006356 2.1e-36 156.0 88 77.3
Glyma.15G140900 Glycine max HOM05D000198 ORTHO05D006356 2.1e-36 156.0 88 77.3
HanXRQChr13g0393411 Helianthus annuus HOM05D000198 ORTHO05D006356 2.1e-36 156.0 88 77.3
Atru.chr4.3011 Acer truncatum HOM05D000198 ORTHO05D006356 2.8e-36 155.6 85 80.0
CSS0039927 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D006356 2.8e-36 155.6 88 77.3
Glyma.07G240300 Glycine max HOM05D000198 ORTHO05D006356 2.8e-36 155.6 88 76.1
Lj6A690G69 Lonicera japonica HOM05D000198 ORTHO05D006356 2.8e-36 155.6 81 82.7
Os07g0688800 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D006356 2.8e-36 155.6 88 76.1
RcHm_v2.0_Chr4g0424861 Rosa chinensis HOM05D000198 ORTHO05D006356 3.6e-36 155.2 79 86.1
PGSC0003DMG400004698 Solanum tuberosum HOM05D000198 ORTHO05D006356 3.6e-36 155.2 81 81.5
TPR.G27261 Trifolium pratense HOM05D000198 ORTHO05D006356 3.6e-36 155.2 88 78.4
GSVIVG01035003001 Vitis vinifera HOM05D000198 ORTHO05D006356 3.6e-36 155.2 88 75.0
Actinidia40374 Actinidia chinensis HOM05D000198 ORTHO05D006356 4.8e-36 154.8 88 78.4
ECA233G5766 Erigeron canadensis HOM05D000198 ORTHO05D006356 4.8e-36 154.8 88 75.0
FvH4_4g19600 Fragaria vesca HOM05D000198 ORTHO05D006356 4.8e-36 154.8 79 84.8
FAN07G1118 Fragaria x ananassa HOM05D000198 ORTHO05D006356 4.8e-36 154.8 79 84.8
FAN12G3961 Fragaria x ananassa HOM05D000198 ORTHO05D006356 4.8e-36 154.8 79 84.8
Lj6g0007194 Lotus japonicus HOM05D000198 ORTHO05D006356 4.8e-36 154.8 88 77.3
Lj6g0022295 Lotus japonicus HOM05D000198 ORTHO05D006356 4.8e-36 154.8 88 77.3
Psat1g161360 Pisum sativum HOM05D000198 ORTHO05D006356 4.8e-36 154.8 88 77.3
arahy.Tifrunner.gnm1.ann1.6QU7U5 Arachis hypogaea HOM05D000198 ORTHO05D006356 6.2e-36 154.5 88 75.0
arahy.Tifrunner.gnm1.ann1.F4QS6F Arachis hypogaea HOM05D000198 ORTHO05D006356 6.2e-36 154.5 88 75.0
CDE09G0351 Ceratophyllum demersum HOM05D000198 ORTHO05D006356 6.2e-36 154.5 81 82.7
Dinv15183 Davidia involucrata HOM05D000198 ORTHO05D006356 6.2e-36 154.5 88 78.4
Lj4g0009022 Lotus japonicus HOM05D000198 ORTHO05D006356 6.2e-36 154.5 88 75.0
AL3G17750 Arabidopsis lyrata HOM05D000198 ORTHO05D006356 1.1e-35 153.7 95 72.6
AT3G66658 Arabidopsis thaliana HOM05D000198 ORTHO05D006356 1.1e-35 153.7 95 72.6
Carub.0003s0615 Capsella rubella HOM05D000198 ORTHO05D006356 1.1e-35 153.7 95 72.6
Lalb_Chr18g0058711 Lupinus albus HOM05D000198 ORTHO05D006356 1.1e-35 153.7 94 74.5
Sabra10G0111400 Salix brachista HOM05D000198 ORTHO05D006356 1.1e-35 153.7 88 76.1
Glyma.17G033100 Glycine max HOM05D000198 ORTHO05D006356 1.4e-35 153.3 88 73.9
vmacro08054 Vaccinium macrocarpon HOM05D000198 ORTHO05D006356 1.4e-35 153.3 88 75.0
Ah.13g071920 Amaranthus hybridus HOM05D000198 ORTHO05D006356 1.8e-35 152.9 88 76.1
Lalb_Chr13g0298451 Lupinus albus HOM05D000198 ORTHO05D006356 1.8e-35 152.9 99 69.7
THA.LOC104818885 Tarenaya hassleriana HOM05D000198 ORTHO05D006356 1.8e-35 152.9 81 82.7
CANSAT78G1506 Cannabis sativa HOM05D000198 ORTHO05D006356 2.4e-35 152.5 88 75.0
CARHR081220 Cardamine hirsuta HOM05D000198 ORTHO05D006356 3.1e-35 152.1 79 86.1
Thhalv10020345m.g Eutrema salsugineum HOM05D000198 ORTHO05D006356 3.1e-35 152.1 79 86.1
Sp3g05630 Schrenkiella parvula HOM05D000198 ORTHO05D006356 3.1e-35 152.1 79 86.1
SalBow8G4861 Salvia bowleyana HOM05D000198 ORTHO05D006356 4.0e-35 151.8 81 77.8
Sc25g0003270 Simmondsia chinensis HOM05D000198 ORTHO05D006356 5.3e-35 151.4 88 75.0
Lsat_1_v5_gn_6_16801 Lactuca sativa HOM05D000198 ORTHO05D006356 9.0e-35 150.6 79 81.0
Cpa.g.sc9.66 Carica papaya HOM05D000198 ORTHO05D006356 1.2e-34 150.2 88 76.1
Cc03_g00900 Coffea canephora HOM05D000198 ORTHO05D006356 1.5e-34 149.8 88 76.1
Sed0015207 Sechium edule HOM05D000198 ORTHO05D006356 1.5e-34 149.8 94 71.3
ClCG06G004610 Citrullus lanatus HOM05D000198 ORTHO05D006356 2.6e-34 149.1 88 75.0
DCAR_002508 Daucus carota HOM05D000198 ORTHO05D006356 2.6e-34 149.1 79 81.0
VMungo1215G0804 Vigna mungo HOM05D000198 ORTHO05D006356 2.6e-34 149.1 88 73.9
Phvul.003G113500 Phaseolus vulgaris HOM05D000198 ORTHO05D006356 4.5e-34 148.3 88 72.7
MSTRG.10149 Avicennia marina HOM05D000198 ORTHO05D006356 7.6e-34 147.5 88 71.6
Potri.008G106000 Populus trichocarpa HOM05D000198 ORTHO05D006356 2.2e-33 146.0 88 76.1
SGA_v2.0_scaffold263G46020 Striga asiatica HOM05D000198 ORTHO05D006356 2.9e-33 145.6 102 62.7
SGA_v2.0_scaffold97G29254 Striga asiatica HOM05D000198 ORTHO05D006356 2.9e-33 145.6 102 62.7
SHI00147 Sapria himalayana HOM05D000198 ORTHO05D006356 3.8e-33 145.2 85 71.8
SGA_v2.0_scaffold104G30081 Striga asiatica HOM05D000198 ORTHO05D006356 3.8e-33 145.2 88 69.3
Zm00001eb331300 Zea mays HOM05D000198 ORTHO05D006356 4.9e-33 144.8 88 72.7
MELO3C021272.2 Cucumis melo HOM05D000198 ORTHO05D006356 1.4e-32 143.3 88 71.6
Migut.G00054 Erythranthe guttata HOM05D000198 ORTHO05D006356 1.2e-31 140.2 81 75.3
A05p41390 Brassica napus HOM05D000198 ORTHO05D006356 3.5e-31 138.7 79 81.0
C05p60610 Brassica napus HOM05D000198 ORTHO05D006356 3.5e-31 138.7 79 81.0
BolC5t34718H Brassica oleracea HOM05D000198 ORTHO05D006356 3.5e-31 138.7 79 81.0
BraA05t22860Z Brassica rapa HOM05D000198 ORTHO05D006356 3.5e-31 138.7 79 81.0
Oeu032015.1 Olea europaea HOM05D000198 ORTHO05D006356 6.0e-31 137.9 81 70.4
CsaV3_6G022360 Cucumis sativus L. HOM05D000198 ORTHO05D006356 1.3e-30 136.7 88 69.3
unitig_32.g10659 Utricularia gibba HOM05D000198 ORTHO05D006356 8.1e-28 127.5 70 80.0
AagrBONN_evm.TU.Sc2ySwM_117.3738 Anthoceros agrestis HOM05D000198 ORTHO05D006356 9.0e-27 124.0 79 72.2
Lj4g0004127 Lotus japonicus HOM05D000198 ORTHO05D006356 1.2e-26 123.6 88 62.5
arahy.Tifrunner.gnm1.ann1.EEWD1J Arachis hypogaea HOM05D000198 ORTHO05D006356 4.5e-26 121.7 88 63.6
VMungo0540G1183 Vigna mungo HOM05D000198 ORTHO05D006356 1.2e-23 113.6 71 67.6
SMO203G0073 Selaginella moellendorffii HOM05D000198 ORTHO05D006356 4.6e-23 111.7 88 60.2
BolC3t16506H Brassica oleracea HOM05D000198 ORTHO05D006356 2.6e-18 95.9 49 83.7
MCO07G239 Micromonas commoda HOM05D000198 ORTHO05D006356 2.6e-18 95.9 79 60.8
PRCOL_00001219 Prasinoderma coloniale HOM05D000198 ORTHO05D006356 1.7e-17 93.2 77 55.8
arahy.Tifrunner.gnm1.ann1.458UQU Arachis hypogaea HOM05D000198 ORTHO05D006356 4.9e-17 91.7 50 78.0
Cre01.g033350 Chlamydomonas reinhardtii HOM05D000198 ORTHO05D006356 2.5e-13 79.3 81 48.1
Cfa026956 Carpinus fangiana HOM05D000198 ORTHO05D008680 5.3e-11 71.6 85 44.7
arahy.Tifrunner.gnm1.ann1.VN5CTW Arachis hypogaea HOM05D024831 ORTHO05D085163 1.4e-08 63.5 95 38.9


User provided reference genes

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