Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 0.0e+00 1400.2 693 100.0
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 3.4e-183 646.0 650 52.9
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 5.9e-180 635.2 650 51.8
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 3.2e-165 586.3 642 49.4
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 7.3e-162 575.1 636 48.3
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 3.6e-161 572.8 657 49.5
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 2.6e-151 540.0 640 46.1
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 5.4e-141 505.8 638 42.9
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 2.1e-140 503.8 636 45.0
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 7.8e-140 501.9 634 43.7
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 3.9e-139 499.6 638 45.0
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 7.3e-138 495.4 637 43.5
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 7.6e-135 485.3 640 42.2
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 9.9e-135 485.0 635 41.9
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 7.1e-133 478.8 659 42.8
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 9.3e-133 478.4 634 41.3
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.8e-128 464.2 634 41.3
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 2.5e-125 453.8 638 39.7
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 5.5e-125 452.6 646 40.1
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 5.5e-125 452.6 641 40.6
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 7.1e-125 452.2 632 39.9
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 2.7e-124 450.3 635 40.8
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 2.7e-124 450.3 633 39.2
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 1.0e-123 448.4 620 40.5
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 1.0e-123 448.4 626 40.4
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 3.0e-123 446.8 639 39.1
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 5.1e-123 446.0 643 39.3
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 5.1e-123 446.0 641 40.1
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 6.7e-123 445.7 632 40.2
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 8.7e-123 445.3 654 39.3
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 8.7e-123 445.3 641 37.8
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 1.1e-122 444.9 632 39.2
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 1.1e-122 444.9 638 41.1
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 1.5e-122 444.5 634 40.2
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.9e-122 444.1 625 40.0
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 4.3e-122 443.0 655 38.8
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 5.7e-122 442.6 635 39.7
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 7.4e-122 442.2 643 38.9
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 1.6e-121 441.0 648 38.3
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 2.8e-121 440.3 562 43.6
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 2.8e-121 440.3 624 40.5
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 6.2e-121 439.1 640 40.6
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 1.1e-120 438.3 625 39.8
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 1.4e-120 438.0 633 38.9
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 2.4e-120 437.2 641 39.6
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 3.1e-120 436.8 642 39.6
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 4.1e-120 436.4 640 38.8
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 5.3e-120 436.0 648 39.8
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 6.9e-120 435.6 666 38.9
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 1.7e-118 431.0 637 41.0
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.7e-118 431.0 672 37.9
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 1.7e-118 431.0 622 39.4
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 2.2e-118 430.6 638 40.1
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 8.4e-118 428.7 649 38.8
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 3.2e-117 426.8 634 39.9
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 1.2e-116 424.9 623 40.0
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 4.6e-116 422.9 625 38.9
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 1.3e-115 421.4 569 40.9
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 2.3e-115 420.6 625 38.7
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 5.1e-115 419.5 625 38.1
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 6.7e-115 419.1 644 37.9
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.1e-114 418.3 625 37.6
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 1.5e-114 417.9 625 38.9
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 1.5e-114 417.9 657 38.4
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 2.4e-112 410.6 632 38.6
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 9.0e-112 408.7 645 37.7
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 1.5e-111 407.9 641 38.5
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 4.5e-111 406.4 643 37.5
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 2.2e-110 404.1 628 35.8
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 3.8e-110 403.3 739 34.0
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 6.5e-110 402.5 634 36.0
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 7.2e-109 399.1 660 35.8
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.7e-108 397.1 624 37.0
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 4.6e-108 396.4 636 35.4
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.2e-105 387.5 636 36.6
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 1.1e-104 385.2 633 36.3
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 5.3e-104 382.9 632 36.2
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 4.5e-103 379.8 634 37.4
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 7.7e-103 379.0 632 36.6
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 2.9e-102 377.1 633 37.1
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 5.0e-102 376.3 632 36.4
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 2.5e-101 374.0 632 35.9
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 9.4e-101 372.1 632 36.1
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 1.6e-100 371.3 622 36.5
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 4.7e-100 369.8 645 36.3
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 2.6e-98 364.0 633 36.3
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 3.3e-98 363.6 564 37.8
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 1.7e-97 361.3 632 35.6
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 2.8e-97 360.5 632 35.3
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 6.3e-97 359.4 659 34.4
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 7.0e-96 355.9 639 36.2
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 1.2e-95 355.1 597 35.8
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 1.5e-95 354.8 633 34.6
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 3.5e-95 353.6 629 34.7
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 2.9e-94 350.5 634 35.8
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 6.5e-94 349.4 634 34.1
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.5e-93 348.2 624 36.1
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 2.7e-92 344.0 643 35.0
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 2.2e-89 334.3 632 33.7
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 1.1e-88 332.0 671 32.9
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 3.1e-88 330.5 285 64.2
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 3.5e-87 327.0 553 35.6
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.4e-83 315.1 684 30.8
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 1.3e-78 298.5 553 34.0
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 1.3e-73 282.0 300 50.3
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 9.1e-72 275.8 316 48.1
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 1.4e-67 261.9 423 35.9
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 6.8e-67 259.6 498 33.3
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 5.7e-66 256.5 470 36.2
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 5.0e-62 243.4 480 34.2
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 1.5e-61 241.9 479 34.0
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 2.0e-58 231.5 246 41.9
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.2e-57 228.0 444 34.7
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 6.4e-57 226.5 223 45.7
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 6.4e-57 226.5 224 46.0
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 4.1e-56 223.8 229 43.2
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 1.2e-55 222.2 228 44.7
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 1.2e-52 212.2 627 26.5
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 4.3e-45 187.2 175 46.9
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 2.1e-44 184.9 194 52.6
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 7.1e-40 169.9 107 74.8
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 3.6e-36 157.5 120 56.7
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 2.9e-33 147.9 128 52.3
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.2e-26 125.9 162 49.4
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 4.4e-26 124.0 161 47.8
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 9.9e-26 122.9 151 48.3
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 1.3e-25 122.5 133 52.6
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 1.2e-23 115.9 158 42.4
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 2.0e-18 98.6 135 43.7
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 5.5e-08 63.9 57 52.6


User provided reference genes

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