Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25983 Sequoiadendron giganteum HOM05D001013 ORTHO05D386651 1.8e-102 375.9 195 100.0
MBI10_g16795_MAGBIO Magnolia biondii HOM05D006183 ORTHO05D007844 1.4e-33 147.1 278 37.1
ATR1126G083 Amborella trichopoda HOM05D001013 ORTHO05D004597 5.4e-30 135.2 292 34.2
Pp3c2_20120 Physcomitrium patens HOM05D001013 ORTHO05D004597 1.2e-29 134.0 157 44.6
Mapoly0046s0052 Marchantia polymorpha HOM05D001013 ORTHO05D004597 1.7e-28 130.2 176 45.5
SMO172G0195 Selaginella moellendorffii HOM05D001013 ORTHO05D004597 4.8e-26 122.1 286 32.2
SEGI_31375 Sequoiadendron giganteum HOM05D006183 ORTHO05D385076 1.1e-14 84.3 53 77.4
MCO15G310 Micromonas commoda HOM05D001013 ORTHO05D004597 4.0e-09 65.9 130 41.5
PGR119G0568 Punica granatum HOM05D001013 ORTHO05D004597 7.6e-08 61.6 131 38.9
MELO3C015199.2 Cucumis melo HOM05D001013 ORTHO05D004597 1.0e-07 61.2 130 36.9
Pp3c20_16340 Physcomitrium patens HOM05D001013 ORTHO05D004597 1.3e-07 60.8 148 35.8
Manes.06G165500 Manihot esculenta HOM05D001013 ORTHO05D004597 6.5e-07 58.5 130 35.4
ClCG03G013290 Citrullus lanatus HOM05D001013 ORTHO05D004597 8.4e-07 58.2 130 36.9
arahy.Tifrunner.gnm1.ann1.EX6ZD6 Arachis hypogaea HOM05D001013 ORTHO05D004597 1.1e-06 57.8 131 38.9
arahy.Tifrunner.gnm1.ann1.I21QA9 Arachis hypogaea HOM05D001013 ORTHO05D004597 1.1e-06 57.8 131 38.9
CsaV3_1G042760 Cucumis sativus L. HOM05D001013 ORTHO05D004597 1.1e-06 57.8 131 38.9
Eucgr.J00780 Eucalyptus grandis HOM05D001013 ORTHO05D004597 1.1e-06 57.8 131 36.6
Glyma.15G034000 Glycine max HOM05D001013 ORTHO05D004597 1.4e-06 57.4 149 35.6
Sed0014521 Sechium edule HOM05D001013 ORTHO05D004597 1.4e-06 57.4 131 38.2
Atru.chr3.2746 Acer truncatum HOM05D001013 ORTHO05D004597 1.9e-06 57.0 177 32.8
Eucgr.J00782 Eucalyptus grandis HOM05D001013 ORTHO05D004597 1.9e-06 57.0 131 37.4
Phvul.L009543 Phaseolus vulgaris HOM05D001013 ORTHO05D004597 1.9e-06 57.0 157 34.4
MD11G1161000 Malus domestica HOM05D001013 ORTHO05D004597 2.5e-06 56.6 131 38.2
AUR62019284 Chenopodium quinoa HOM05D001013 ORTHO05D004597 3.2e-06 56.2 131 38.2
Aqoxy1G00274 Aquilegia oxysepala HOM05D001013 ORTHO05D004597 5.5e-06 55.5 157 32.5
EL10Ac4g10284 Beta vulgaris HOM05D001013 ORTHO05D004597 5.5e-06 55.5 130 34.6
CANSAT01G2178 Cannabis sativa HOM05D001013 ORTHO05D004597 5.5e-06 55.5 130 36.2
Pp3c19_18920 Physcomitrium patens HOM05D001013 ORTHO05D001703 5.5e-06 55.5 140 32.1
GSVIVG01025282001 Vitis vinifera HOM05D001013 ORTHO05D004597 5.5e-06 55.5 130 34.6
AUR62000107 Chenopodium quinoa HOM05D001013 ORTHO05D004597 7.1e-06 55.1 130 35.4
Os03g0429800 Oryza sativa ssp. japonica HOM05D001013 ORTHO05D004597 7.1e-06 55.1 131 38.9
Lalb_Chr24g0397071 Lupinus albus HOM05D001013 ORTHO05D004597 9.3e-06 54.7 131 37.4
MD03G1177200 Malus domestica HOM05D001013 ORTHO05D004597 9.3e-06 54.7 123 37.4


User provided reference genes

Program Settings