Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 0.0e+00 1880.9 1040 100.0
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.6e-67 262.3 716 34.9
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.0e-66 259.6 395 43.3
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.2e-53 215.3 937 29.8
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 2.1e-51 208.8 875 28.2
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.3e-50 206.1 853 28.3
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.1e-49 203.0 883 29.0
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 1.6e-48 199.1 892 27.0
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 1.6e-48 199.1 428 38.6
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 3.6e-48 198.0 848 27.7
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 8.1e-48 196.8 898 28.2
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 1.1e-47 196.4 913 27.8
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 1.8e-47 195.7 973 26.8
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.2e-46 193.0 356 43.0
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 9.9e-46 189.9 407 38.1
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 1.3e-45 189.5 923 26.1
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 1.7e-45 189.1 395 40.0
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 2.9e-45 188.3 887 28.1
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 4.9e-45 187.6 941 26.8
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 6.4e-45 187.2 851 27.8
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 1.1e-44 186.4 872 28.0
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 1.9e-44 185.7 853 27.5
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 1.9e-44 185.7 849 28.3
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.4e-44 185.3 887 27.4
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 7.1e-44 183.7 872 27.8
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 9.3e-44 183.3 430 36.7
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 9.3e-44 183.3 343 40.5
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 1.6e-43 182.6 395 39.5
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.0e-42 179.9 877 26.7
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 1.3e-42 179.5 404 37.6
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.7e-42 179.1 877 26.8
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 2.3e-42 178.7 358 38.3
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 3.0e-42 178.3 853 26.3
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 5.1e-42 177.6 939 24.7
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 6.6e-42 177.2 348 39.9
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 8.7e-42 176.8 359 39.3
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 1.5e-41 176.0 878 27.1
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 1.5e-41 176.0 318 39.3
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 2.5e-41 175.3 898 29.2
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 5.6e-41 174.1 385 37.7
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 7.3e-41 173.7 320 42.8
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 4.8e-40 171.0 892 26.6
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 6.2e-40 170.6 904 26.7
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 8.1e-40 170.2 885 25.3
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.1e-39 169.9 849 26.7
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 1.8e-39 169.1 899 25.0
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 3.1e-39 168.3 911 25.1
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 3.1e-39 168.3 954 26.5
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 3.1e-39 168.3 419 37.5
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 4.0e-39 167.9 367 37.3
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 1.5e-38 166.0 328 38.4
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 3.4e-38 164.9 400 35.2
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 3.4e-38 164.9 875 28.6
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 4.5e-38 164.5 901 26.4
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 5.8e-38 164.1 844 27.3
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 7.6e-38 163.7 393 37.4
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 7.6e-38 163.7 445 34.4
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 9.9e-38 163.3 857 26.1
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 9.9e-38 163.3 372 37.6
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 1.3e-37 162.9 893 26.0
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 1.7e-37 162.5 312 39.4
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 2.2e-37 162.2 910 24.8
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 4.9e-37 161.0 383 34.5
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 4.9e-37 161.0 905 26.0
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 6.4e-37 160.6 853 24.6
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 6.4e-37 160.6 884 29.3
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 8.4e-37 160.2 907 26.0
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 1.4e-36 159.5 365 37.3
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 1.4e-36 159.5 853 26.4
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.9e-36 159.1 990 25.8
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 1.9e-36 159.1 378 37.0
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 4.2e-36 157.9 910 25.2
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 7.1e-36 157.1 312 38.8
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 9.3e-36 156.8 586 28.2
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 9.3e-36 156.8 395 34.9
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 9.3e-36 156.8 903 26.1
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 9.3e-36 156.8 879 25.8
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 9.3e-36 156.8 202 49.5
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 1.2e-35 156.4 304 40.8
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 3.5e-35 154.8 377 35.5
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 6.0e-35 154.1 310 38.7
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 6.0e-35 154.1 881 24.5
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 7.9e-35 153.7 371 35.0
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 1.0e-34 153.3 176 52.8
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.3e-34 152.9 895 24.7
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 5.1e-34 151.0 381 36.7
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 1.1e-33 149.8 310 38.4
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 1.5e-33 149.4 303 40.6
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 1.3e-32 146.4 854 25.4
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 1.3e-32 146.4 883 26.3
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 1.3e-32 146.4 913 25.7
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 1.6e-32 146.0 580 34.1
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 8.1e-32 143.7 311 39.2
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 1.1e-31 143.3 303 39.3
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 3.1e-31 141.7 323 37.2
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.1e-28 133.3 365 32.1
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 4.6e-27 127.9 281 39.9
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 3.0e-26 125.2 889 26.3
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.6e-24 119.4 868 26.3
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 9.0e-23 113.6 374 30.7
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 2.2e-16 92.4 799 26.3
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 4.1e-15 88.2 132 47.0
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 1.9e-12 79.3 133 42.9
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 1.2e-11 76.6 350 28.9
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 2.3e-10 72.4 73 52.1
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 3.0e-10 72.0 74 48.6
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 3.3e-09 68.6 45 64.4
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 4.3e-09 68.2 46 65.2
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 7.7e-06 57.4 186 29.0


User provided reference genes

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