Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25921 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 0.0e+00 1476.1 1069 100.0
SEGI_12066 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 6.1e-91 340.1 550 38.7
SEGI_05802 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 2.8e-88 331.3 623 36.4
SEGI_36855 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 2.2e-85 321.6 669 34.1
SEGI_14946 Sequoiadendron giganteum HOM05D008993 ORTHO05D007167 2.1e-83 315.1 674 32.5
SEGI_02863 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 8.0e-83 313.2 636 35.4
SEGI_39289 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 7.7e-70 270.0 583 33.3
SEGI_05277 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 8.3e-64 250.0 591 31.3
SEGI_20076 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 3.7e-56 224.6 292 42.8
SEGI_39249 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 2.0e-41 175.6 398 34.2
SEGI_39243 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 2.4e-39 168.7 392 33.2
SEGI_04443 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 5.2e-34 151.0 219 41.1
SEGI_33034 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 6.0e-30 137.5 108 65.7
SEGI_18320 Sequoiadendron giganteum HOM05D000615 ORTHO05D000447 1.8e-26 125.9 395 27.6
SEGI_25076 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 1.0e-21 110.2 119 44.5
ECA246G5141 Erigeron canadensis HOM05D000615 ORTHO05D000447 2.2e-16 92.4 220 30.9
Haze_12283 Corylus avellana HOM05D000615 ORTHO05D000447 3.5e-14 85.1 340 27.9
HanXRQChr17g0540141 Helianthus annuus HOM05D000615 ORTHO05D000447 6.0e-14 84.3 232 31.9
SEGI_13376 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 1.0e-13 83.6 48 83.3
Manes.12G020200 Manihot esculenta HOM05D000615 ORTHO05D000447 1.3e-13 83.2 248 27.0
Lsat_1_v5_gn_3_30081 Lactuca sativa HOM05D000615 ORTHO05D000447 3.9e-13 81.6 229 31.0
MBI10_g30158_MAGBIO Magnolia biondii HOM05D000615 ORTHO05D000447 8.7e-13 80.5 273 26.0
GSVIVG01000576001 Vitis vinifera HOM05D000615 ORTHO05D000447 8.7e-13 80.5 262 26.3
Cfa009249 Carpinus fangiana HOM05D000615 ORTHO05D000447 1.1e-12 80.1 307 27.4
Dinv14747 Davidia involucrata HOM05D000615 ORTHO05D000447 1.9e-12 79.3 261 26.8
SEGI_29066 Sequoiadendron giganteum HOM05D006005 ORTHO05D007167 1.9e-12 79.3 137 39.4
AL2G26530 Arabidopsis lyrata HOM05D000615 ORTHO05D000447 2.5e-12 79.0 218 28.4
arahy.Tifrunner.gnm1.ann1.90SEXW Arachis hypogaea HOM05D000615 ORTHO05D000447 3.3e-12 78.6 297 25.6
Carub.0002s1424 Capsella rubella HOM05D000615 ORTHO05D000447 3.3e-12 78.6 189 29.6
Migut.E00218 Erythranthe guttata HOM05D000615 ORTHO05D000447 7.4e-12 77.4 237 29.1
CiPaw.05G178900 Carya illinoinensis HOM05D000615 ORTHO05D000447 1.3e-11 76.6 274 27.0
FAN06G4356 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.3e-11 76.6 255 25.9
FAN17G0971 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.6e-11 76.3 324 24.4
AT1G67790 Arabidopsis thaliana HOM05D000615 ORTHO05D000447 2.8e-11 75.5 124 36.3
TWI18G0878 Tripterygium wilfordii HOM05D000615 ORTHO05D000447 2.8e-11 75.5 307 25.1
VMungo1383G3496 Vigna mungo HOM05D000615 ORTHO05D000447 2.8e-11 75.5 345 25.5
FvH4_7g07630 Fragaria vesca HOM05D000615 ORTHO05D000447 3.7e-11 75.1 255 25.9
FvH4_4g25330 Fragaria vesca HOM05D000615 ORTHO05D000447 4.8e-11 74.7 329 25.2
Peaxi162Scf00128g00056 Petunia axillaris HOM05D000615 ORTHO05D000447 6.2e-11 74.3 239 25.9
RcHm_v2.0_Chr4g0432621 Rosa chinensis HOM05D000615 ORTHO05D000447 6.2e-11 74.3 217 29.5
FAN12G1729 Fragaria x ananassa HOM05D000615 ORTHO05D000447 8.1e-11 73.9 329 25.2
Glyma.11G244200 Glycine max HOM05D000615 ORTHO05D000447 8.1e-11 73.9 327 24.8
Phvul.001G256100 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 1.4e-10 73.2 314 25.2
FAN10G3496 Fragaria x ananassa HOM05D000615 ORTHO05D000447 2.4e-10 72.4 215 27.9
Aqoxy5G03656 Aquilegia oxysepala HOM05D000615 ORTHO05D000447 4.0e-10 71.6 304 27.6
MD16G1104700 Malus domestica HOM05D000615 ORTHO05D000447 5.3e-10 71.2 211 26.5
Prupe.1G241600 Prunus persica HOM05D000615 ORTHO05D000447 5.3e-10 71.2 189 29.1
AUR62005518 Chenopodium quinoa HOM05D000615 ORTHO05D000447 6.9e-10 70.9 309 24.9
FAN07G1396 Fragaria x ananassa HOM05D000615 ORTHO05D000447 6.9e-10 70.9 324 24.4
CANSAT01G1199 Cannabis sativa HOM05D000615 ORTHO05D000447 1.2e-09 70.1 216 27.8
Lalb_Chr08g0230851 Lupinus albus HOM05D000615 ORTHO05D000447 1.2e-09 70.1 363 21.8
PGSC0003DMG400016972 Solanum tuberosum HOM05D000615 ORTHO05D000447 1.2e-09 70.1 247 26.3
Eucgr.B03242 Eucalyptus grandis HOM05D000615 ORTHO05D000447 1.5e-09 69.7 304 24.3
Hund06046 Selenicereus undatus HOM05D000615 ORTHO05D000447 1.5e-09 69.7 300 27.7
HPP92_024525 Vanilla planifolia HOM05D000615 ORTHO05D000447 1.5e-09 69.7 253 26.9
Sopen05g008790 Solanum pennellii HOM05D000615 ORTHO05D000447 2.0e-09 69.3 257 25.3
THA.LOC104802389 Tarenaya hassleriana HOM05D000615 ORTHO05D000447 2.0e-09 69.3 249 24.9
ATR0199G009 Amborella trichopoda HOM05D000615 ORTHO05D000447 2.6e-09 68.9 125 32.8
Thhalv10019754m.g Eutrema salsugineum HOM05D000615 ORTHO05D000447 2.6e-09 68.9 187 28.9
QL03p056367 Quercus lobata HOM05D000615 ORTHO05D000447 2.6e-09 68.9 295 24.4
Ah.02g130320 Amaranthus hybridus HOM05D000615 ORTHO05D000447 3.4e-09 68.6 297 22.6
CDE06G2721 Ceratophyllum demersum HOM05D000615 ORTHO05D000447 3.4e-09 68.6 243 25.1
BcaB03g15157 Brassica carinata HOM05D000615 ORTHO05D000447 4.5e-09 68.2 221 26.7
Sp5g22800 Schrenkiella parvula HOM05D000615 ORTHO05D000447 4.5e-09 68.2 102 35.3
Atru.chr11.2178 Acer truncatum HOM05D000615 ORTHO05D000447 5.8e-09 67.8 270 27.4
CSS0030838 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 5.8e-09 67.8 285 23.9
CDE08G0947 Ceratophyllum demersum HOM05D000615 ORTHO05D000447 5.8e-09 67.8 252 24.2
Hund05611 Selenicereus undatus HOM05D000615 ORTHO05D000447 5.8e-09 67.8 300 24.0
Gohir.A03G133366 Gossypium hirsutum HOM05D000615 ORTHO05D000447 1.0e-08 67.0 245 25.7
PGR102G3023 Punica granatum HOM05D000615 ORTHO05D000447 1.0e-08 67.0 308 22.7
Sabra10G0019400 Salix brachista HOM05D000615 ORTHO05D000447 1.0e-08 67.0 207 28.5
Sed0009121 Sechium edule HOM05D000615 ORTHO05D000447 1.0e-08 67.0 276 25.4
THA.LOC104821100 Tarenaya hassleriana HOM05D000615 ORTHO05D000447 1.0e-08 67.0 251 23.1
TAR374G0229 Trochodendron aralioides HOM05D000615 ORTHO05D000447 1.0e-08 67.0 394 21.8
Atru.chr1.3655 Acer truncatum HOM05D000615 ORTHO05D000447 1.3e-08 66.6 378 23.8
Aqoxy5G03665_Aqoxy5G03666 Aquilegia oxysepala HOM05D000615 ORTHO05D000447 1.3e-08 66.6 242 25.2
FAN22G0970 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.3e-08 66.6 328 22.9
CAN.G43.22 Capsicum annuum HOM05D000615 ORTHO05D000447 1.7e-08 66.2 249 27.3
Gohir.A03G135700 Gossypium hirsutum HOM05D000615 ORTHO05D000447 1.7e-08 66.2 238 25.2
Solyc05g013860.4 Solanum lycopersicum HOM05D000615 ORTHO05D000447 1.7e-08 66.2 298 24.2
Aqoxy3G01292 Aquilegia oxysepala HOM05D000615 ORTHO05D000447 2.2e-08 65.9 389 23.9
CSS0013718 Camellia sinensis var. sinensis HOM05D000615 ORTHO05D000447 2.2e-08 65.9 286 23.4
SEGI_13240 Sequoiadendron giganteum HOM05D000002 ORTHO05D007167 2.2e-08 65.9 42 71.4
CiPaw.03G047200 Carya illinoinensis HOM05D000615 ORTHO05D000447 2.9e-08 65.5 264 23.1
Glyma.18G012800 Glycine max HOM05D000615 ORTHO05D000447 2.9e-08 65.5 186 28.5
SalBow8G0637 Salvia bowleyana HOM05D000615 ORTHO05D000447 2.9e-08 65.5 237 26.2
Gorai.005G175300 Gossypium raimondii HOM05D000615 ORTHO05D000447 3.8e-08 65.1 238 25.2
THA.LOC104805029 Tarenaya hassleriana HOM05D000615 ORTHO05D000447 3.8e-08 65.1 148 31.1
THA.LOC104825547 Tarenaya hassleriana HOM05D000615 ORTHO05D000447 3.8e-08 65.1 148 31.1
MSTRG.550 Avicennia marina HOM05D000615 ORTHO05D000447 4.9e-08 64.7 295 24.4
Gohir.D02G156500 Gossypium hirsutum HOM05D000615 ORTHO05D000447 4.9e-08 64.7 238 24.8
Psat0s1411g0080 Pisum sativum HOM05D000615 ORTHO05D000447 4.9e-08 64.7 258 24.4
vmacro19273 Vaccinium macrocarpon HOM05D000615 ORTHO05D000447 4.9e-08 64.7 267 22.8
Aqoxy5G03659 Aquilegia oxysepala HOM05D000615 ORTHO05D000447 6.5e-08 64.3 339 22.7
A07p34350 Brassica napus HOM05D000615 ORTHO05D000447 6.5e-08 64.3 184 31.0
Cfa008386 Carpinus fangiana HOM05D000615 ORTHO05D000447 6.5e-08 64.3 120 30.8
Rhsim08G0180700 Rhododendron simsii HOM05D000615 ORTHO05D000447 6.5e-08 64.3 106 34.0
Dinv38501 Davidia involucrata HOM05D000615 ORTHO05D000447 8.4e-08 63.9 323 22.0
Gorai.005G175200 Gossypium raimondii HOM05D000615 ORTHO05D000447 8.4e-08 63.9 245 25.3
Rhsim08G0180500 Rhododendron simsii HOM05D000615 ORTHO05D000447 8.4e-08 63.9 313 22.0
Actinidia15116 Actinidia chinensis HOM05D000615 ORTHO05D000447 1.1e-07 63.5 216 27.3
MSTRG.13338 Avicennia marina HOM05D000615 ORTHO05D000447 1.1e-07 63.5 230 24.3
BraA03t12412Z Brassica rapa HOM05D000615 ORTHO05D000447 1.1e-07 63.5 239 24.3
FvH4_4g25310 Fragaria vesca HOM05D000615 ORTHO05D000447 1.1e-07 63.5 241 26.6
Gohir.D02G156400 Gossypium hirsutum HOM05D000615 ORTHO05D000447 1.1e-07 63.5 245 25.3
Hund05610 Selenicereus undatus HOM05D000615 ORTHO05D000447 1.1e-07 63.5 262 25.2
A03p32420 Brassica napus HOM05D000615 ORTHO05D000447 1.4e-07 63.2 239 24.3
BolC6t39206H Brassica oleracea HOM05D000615 ORTHO05D000447 1.4e-07 63.2 143 32.2
ECA234G2902 Erigeron canadensis HOM05D000615 ORTHO05D000447 1.4e-07 63.2 294 23.8
FAN12G3881 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.4e-07 63.2 241 27.4
Hma1.2p1_0079F.1_g041185 Hydrangea macrophylla HOM05D000615 ORTHO05D000447 1.4e-07 63.2 284 25.7
Nn4g22533 Nelumbo nucifera HOM05D000615 ORTHO05D000447 1.4e-07 63.2 312 23.7
QL06p015345 Quercus lobata HOM05D000615 ORTHO05D000447 1.4e-07 63.2 120 30.8
SHI05369 Sapria himalayana HOM05D000615 ORTHO05D000447 2.5e-07 62.4 329 22.5
BcaC08g46206 Brassica carinata HOM05D000615 ORTHO05D000447 3.2e-07 62.0 135 32.6
C06p42180 Brassica napus HOM05D000615 ORTHO05D000447 3.2e-07 62.0 135 32.6
AUR62032406 Chenopodium quinoa HOM05D000615 ORTHO05D000447 3.2e-07 62.0 237 22.8
Nitab4.5_0000229g0030 Nicotiana tabacum HOM05D000615 ORTHO05D000447 3.2e-07 62.0 247 25.5
Prupe.1G028400 Prunus persica HOM05D000615 ORTHO05D000447 3.2e-07 62.0 114 30.7
Rhsim08G0181000 Rhododendron simsii HOM05D000615 ORTHO05D000447 3.2e-07 62.0 290 23.1
Sp3g00370 Schrenkiella parvula HOM05D000615 ORTHO05D000447 3.2e-07 62.0 137 33.6
Aa31LG5G10810 Aethionema arabicum HOM05D000615 ORTHO05D000447 4.2e-07 61.6 251 23.9
AT3G01680 Arabidopsis thaliana HOM05D000615 ORTHO05D000447 4.2e-07 61.6 137 32.1
BcaC01g04533 Brassica carinata HOM05D000615 ORTHO05D000447 4.2e-07 61.6 237 24.1
BNapus_Darmor_BZH_scaffold_229p00020 Brassica napus HOM05D000615 ORTHO05D000447 4.2e-07 61.6 249 22.9
BraA07t31065Z Brassica rapa HOM05D000615 ORTHO05D000447 4.2e-07 61.6 184 29.9
BraSC76t46603Z Brassica rapa HOM05D000615 ORTHO05D000447 4.2e-07 61.6 249 22.9
Cfa009253 Carpinus fangiana HOM05D000615 ORTHO05D000447 4.2e-07 61.6 384 22.9
Glyma.16G067700 Glycine max HOM05D000615 ORTHO05D000447 4.2e-07 61.6 237 25.3
MD13G1206000 Malus domestica HOM05D000615 ORTHO05D000447 4.2e-07 61.6 114 29.8
PSO063G5069 Papaver somniferum HOM05D000615 ORTHO05D000447 4.2e-07 61.6 173 28.9
SalBow8G0895 Salvia bowleyana HOM05D000615 ORTHO05D000447 4.2e-07 61.6 111 29.7
C09p75000 Brassica napus HOM05D000615 ORTHO05D000447 5.5e-07 61.2 226 23.9
Carub.0003s0038 Capsella rubella HOM05D000615 ORTHO05D000447 5.5e-07 61.2 137 32.1
AUR62024224 Chenopodium quinoa HOM05D000615 ORTHO05D000447 5.5e-07 61.2 260 23.8
Ca_26929_v3 Cicer arietinum L. HOM05D000615 ORTHO05D000447 5.5e-07 61.2 258 23.3
Thhalv10020146m.g Eutrema salsugineum HOM05D000615 ORTHO05D000447 5.5e-07 61.2 137 32.1
Nitab4.5_0003917g0020 Nicotiana tabacum HOM05D000615 ORTHO05D000447 5.5e-07 61.2 256 24.6
GSVIVG01032360001 Vitis vinifera HOM05D000615 ORTHO05D000447 5.5e-07 61.2 292 23.6
Ciclev10030798m.g Citrus clementina HOM05D000615 ORTHO05D000447 7.1e-07 60.8 225 24.9
Cc11_g16080 Coffea canephora HOM05D000615 ORTHO05D000447 7.1e-07 60.8 397 20.4
RcHm_v2.0_Chr4g0432571 Rosa chinensis HOM05D000615 ORTHO05D000447 7.1e-07 60.8 232 26.3
Actinidia11915 Actinidia chinensis HOM05D000615 ORTHO05D000447 9.3e-07 60.5 297 23.2
ATR0199G005 Amborella trichopoda HOM05D000615 ORTHO05D000447 9.3e-07 60.5 276 24.3
Cfa009252 Carpinus fangiana HOM05D000615 ORTHO05D000447 9.3e-07 60.5 327 21.7
Lj4g0012004 Lotus japonicus HOM05D001244 ORTHO05D000447 9.3e-07 60.5 356 22.5
Oeu063272.1 Olea europaea HOM05D000615 ORTHO05D000447 9.3e-07 60.5 280 23.6
Ah.03g133490 Amaranthus hybridus HOM05D000615 ORTHO05D000447 1.2e-06 60.1 148 27.7
Ciclev10019128m.g Citrus clementina HOM05D000615 ORTHO05D000447 1.2e-06 60.1 327 24.5
Nn3g16647 Nelumbo nucifera HOM05D000615 ORTHO05D000447 1.2e-06 60.1 204 27.0
Phvul.008G147900 Phaseolus vulgaris HOM05D000615 ORTHO05D000447 1.2e-06 60.1 132 33.3
Hund06841 Selenicereus undatus HOM05D000615 ORTHO05D000447 1.2e-06 60.1 337 23.4
AL3G10470 Arabidopsis lyrata HOM05D000615 ORTHO05D000447 1.6e-06 59.7 137 32.1
FAN22G0435 Fragaria x ananassa HOM05D000615 ORTHO05D000447 1.6e-06 59.7 229 27.5
Hma1.2p1_0279F.1_g111970 Hydrangea macrophylla HOM05D000615 ORTHO05D000447 1.6e-06 59.7 128 32.0
VMungo1383G3717 Vigna mungo HOM05D000615 ORTHO05D000447 1.6e-06 59.7 339 22.1
Duzib268G0349 Durio zibethinus HOM05D000615 ORTHO05D000447 2.1e-06 59.3 235 25.1
ECA234G0015 Erigeron canadensis HOM05D000615 ORTHO05D000447 2.1e-06 59.3 228 22.8
QL06p015469 Quercus lobata HOM05D000615 ORTHO05D000447 2.7e-06 58.9 120 30.0
QL06p015499 Quercus lobata HOM05D000615 ORTHO05D000447 2.7e-06 58.9 120 29.2
QL06p015565 Quercus lobata HOM05D000615 ORTHO05D000447 2.7e-06 58.9 120 29.2
RcHm_v2.0_Chr4g0389771 Rosa chinensis HOM05D000615 ORTHO05D000447 2.7e-06 58.9 129 30.2
vmacro16166 Vaccinium macrocarpon HOM05D000615 ORTHO05D000447 2.7e-06 58.9 256 23.4
Lj3A1062T96 Lonicera japonica HOM05D000615 ORTHO05D000447 3.5e-06 58.5 346 22.3
QL06p015544 Quercus lobata HOM05D000615 ORTHO05D000447 3.5e-06 58.5 120 29.2
Rhsim08G0047900 Rhododendron simsii HOM05D000615 ORTHO05D000447 3.5e-06 58.5 145 31.0
CANSAT78G1655 Cannabis sativa HOM05D000615 ORTHO05D000447 4.6e-06 58.2 116 25.9
CiPaw.01G190900 Carya illinoinensis HOM05D000615 ORTHO05D000447 4.6e-06 58.2 117 27.4
FAN11G2647 Fragaria x ananassa HOM05D000615 ORTHO05D000447 4.6e-06 58.2 114 30.7
Lsat_1_v5_gn_5_12800 Lactuca sativa HOM05D000615 ORTHO05D000447 4.6e-06 58.2 233 21.5
PSO210G7473 Papaver somniferum HOM05D000615 ORTHO05D000447 4.6e-06 58.2 370 22.4
RcHm_v2.0_Chr4g0389751 Rosa chinensis HOM05D000615 ORTHO05D000447 4.6e-06 58.2 114 30.7
Sabra16G0221000 Salix brachista HOM05D000615 ORTHO05D000447 4.6e-06 58.2 127 30.7
Hund18509 Selenicereus undatus HOM05D000615 ORTHO05D000447 4.6e-06 58.2 121 27.3
TAR622G0284 Trochodendron aralioides HOM05D000615 ORTHO05D000447 4.6e-06 58.2 210 25.7
Cpa.g.sc33.71 Carica papaya HOM05D000615 ORTHO05D000447 6.0e-06 57.8 308 22.7
Cfa008390 Carpinus fangiana HOM05D000615 ORTHO05D000447 6.0e-06 57.8 116 28.4
Ciclev10019109m.g Citrus clementina HOM05D000615 ORTHO05D000447 6.0e-06 57.8 124 29.0
Thhalv10020071m.g Eutrema salsugineum HOM05D000615 ORTHO05D000447 6.0e-06 57.8 226 23.5
Lj5A133T94 Lonicera japonica HOM05D000615 ORTHO05D000447 6.0e-06 57.8 320 22.2
RcHm_v2.0_Chr4g0389791 Rosa chinensis HOM05D000615 ORTHO05D000447 6.0e-06 57.8 114 29.8
CANSAT01G3271 Cannabis sativa HOM05D000615 ORTHO05D000447 7.9e-06 57.4 243 23.0
Oeu004666.1 Olea europaea HOM05D000615 ORTHO05D000447 7.9e-06 57.4 244 24.2
Potri.010G050200 Populus trichocarpa HOM05D000615 ORTHO05D000447 7.9e-06 57.4 170 31.8
QL05p007135 Quercus lobata HOM05D000615 ORTHO05D000447 7.9e-06 57.4 118 28.0


User provided reference genes

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