Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 6.2e-233 810.4 417 100.0
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 5.9e-90 335.5 291 61.5
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 2.2e-89 333.6 256 65.2
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 2.2e-89 333.6 228 71.5
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 3.8e-89 332.8 305 58.4
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 5.0e-89 332.4 255 67.5
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 5.0e-89 332.4 233 70.0
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 6.5e-89 332.0 229 69.9
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 1.4e-88 330.9 292 60.3
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.9e-88 330.5 293 60.1
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.5e-88 330.1 228 71.5
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.5e-88 330.1 260 63.5
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 2.5e-88 330.1 229 70.3
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 3.2e-88 329.7 227 70.5
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 3.2e-88 329.7 228 71.1
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 3.2e-88 329.7 260 65.0
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 5.5e-88 328.9 228 71.1
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 5.5e-88 328.9 294 60.2
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 5.5e-88 328.9 234 68.8
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 7.2e-88 328.6 228 71.1
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 7.2e-88 328.6 231 71.0
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 7.2e-88 328.6 230 71.7
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 9.3e-88 328.2 232 67.7
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 1.2e-87 327.8 232 70.3
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 1.6e-87 327.4 237 68.4
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.6e-87 327.4 251 64.9
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.1e-87 327.0 225 72.0
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.1e-87 327.0 227 70.9
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.7e-87 326.6 227 70.5
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 4.6e-87 325.9 227 69.6
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 6.1e-87 325.5 228 69.3
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 1.0e-86 324.7 247 67.6
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.3e-86 324.3 218 72.5
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.8e-86 323.9 247 67.2
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.8e-86 323.9 307 59.3
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 2.3e-86 323.6 262 62.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 2.3e-86 323.6 229 69.4
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 3.0e-86 323.2 259 64.9
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 3.0e-86 323.2 259 64.9
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.0e-86 323.2 231 69.7
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 3.0e-86 323.2 251 66.5
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 3.9e-86 322.8 230 68.7
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 3.9e-86 322.8 251 64.9
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 3.9e-86 322.8 227 70.5
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 5.1e-86 322.4 232 68.5
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 6.7e-86 322.0 298 58.1
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 8.7e-86 321.6 238 68.1
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 8.7e-86 321.6 247 65.2
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.1e-85 321.2 234 67.1
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 1.1e-85 321.2 292 60.6
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 1.1e-85 321.2 247 65.2
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 1.1e-85 321.2 223 69.1
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 1.1e-85 321.2 243 67.1
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.9e-85 320.5 262 64.5
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 3.3e-85 319.7 228 68.4
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 3.3e-85 319.7 234 66.7
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 3.3e-85 319.7 231 68.0
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 4.3e-85 319.3 236 66.5
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.7e-85 318.9 251 64.5
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 5.7e-85 318.9 228 68.9
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 5.7e-85 318.9 264 62.1
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 7.4e-85 318.5 241 66.8
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 9.7e-85 318.2 230 67.8
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.7e-85 318.2 270 61.5
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 9.7e-85 318.2 271 61.6
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 1.3e-84 317.8 267 61.4
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 1.6e-84 317.4 235 66.8
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 1.6e-84 317.4 242 64.5
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 3.7e-84 316.2 256 62.1
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 3.7e-84 316.2 227 70.0
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 6.3e-84 315.5 268 64.2
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 6.3e-84 315.5 256 64.1
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 8.2e-84 315.1 230 69.6
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 1.4e-83 314.3 304 56.2
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 1.4e-83 314.3 256 63.7
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.8e-83 313.9 228 68.0
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.8e-83 313.9 265 61.5
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 2.4e-83 313.5 252 62.3
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 2.4e-83 313.5 227 66.5
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 5.3e-83 312.4 209 73.7
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 6.9e-83 312.0 227 66.1
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 6.9e-83 312.0 229 67.2
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.2e-82 311.2 235 66.8
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.5e-82 310.8 266 60.5
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 5.9e-82 308.9 208 72.6
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 6.5e-81 305.4 233 65.7
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 6.5e-81 305.4 220 68.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.9e-80 303.9 249 61.8
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 2.5e-80 303.5 332 52.1
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 5.5e-80 302.4 227 64.3
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 7.2e-80 302.0 271 61.3
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.1e-79 300.4 272 61.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.1e-79 300.4 272 61.8
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 2.7e-79 300.1 260 59.2
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 6.1e-79 298.9 269 62.1
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 6.7e-78 295.4 209 69.9
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.3e-76 291.2 309 51.5
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 6.3e-76 288.9 255 58.8
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.1e-75 288.1 202 69.3
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 9.1e-75 285.0 235 61.3
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 1.5e-69 267.7 234 60.7
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 4.4e-69 266.2 220 60.0
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 5.7e-69 265.8 279 52.3
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.2e-62 242.7 191 63.9
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.7e-58 230.3 241 54.4
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.2e-56 223.0 206 57.8
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 5.7e-53 212.6 207 58.0
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 7.0e-51 205.7 196 56.6
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.7e-31 139.8 197 46.2
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 6.2e-31 139.4 241 35.3
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.8e-30 137.9 223 40.8
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.3e-28 131.7 198 43.4
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 9.2e-27 125.6 223 35.4
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 4.6e-26 123.2 83 77.1
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 8.1e-23 112.5 92 65.2
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.1e-22 112.1 120 50.8
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 1.1e-19 102.1 130 41.5
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 3.1e-06 57.4 80 40.0


User provided reference genes

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