Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25834 Sequoiadendron giganteum HOM05D002498 ORTHO05D002553 2.1e-162 575.9 339 100.0
TAR636G1942 Trochodendron aralioides HOM05D002498 ORTHO05D002553 1.3e-15 88.2 146 46.6
A06p13370 Brassica napus HOM05D002498 ORTHO05D002553 2.8e-13 80.5 191 36.1
BraA06t24489Z Brassica rapa HOM05D002498 ORTHO05D002553 2.8e-13 80.5 191 36.1
BcaNung06974 Brassica carinata HOM05D002498 ORTHO05D002553 1.4e-12 78.2 200 36.5
PGR119G0909 Punica granatum HOM05D002498 ORTHO05D002553 1.4e-12 78.2 123 47.2
Sp1g15580 Schrenkiella parvula HOM05D002498 ORTHO05D002553 1.4e-12 78.2 201 37.8
HPP92_026973 Vanilla planifolia HOM05D002498 ORTHO05D002553 1.8e-12 77.8 192 40.1
AT1G17440 Arabidopsis thaliana HOM05D002498 ORTHO05D002553 4.0e-12 76.6 138 43.5
C05p15830 Brassica napus HOM05D002498 ORTHO05D002553 5.2e-12 76.3 244 33.2
BolC5t30289H Brassica oleracea HOM05D002498 ORTHO05D002553 5.2e-12 76.3 244 33.2
Sc12g0010550 Simmondsia chinensis HOM05D002498 ORTHO05D002553 6.8e-12 75.9 116 50.0
THA.LOC104813958 Tarenaya hassleriana HOM05D002498 ORTHO05D002553 8.9e-12 75.5 200 36.5
Sed0015077 Sechium edule HOM05D002498 ORTHO05D002553 1.2e-11 75.1 137 41.6
Lsat_1_v5_gn_1_38060 Lactuca sativa HOM05D002498 ORTHO05D002553 2.6e-11 73.9 202 37.6
Lalb_Chr04g0263441 Lupinus albus HOM05D002498 ORTHO05D002553 4.4e-11 73.2 148 41.9
Potri.001G169900 Populus trichocarpa HOM05D002498 ORTHO05D002553 4.4e-11 73.2 189 34.4
Hma1.2p1_0496F.1_g166220 Hydrangea macrophylla HOM05D002498 ORTHO05D002553 5.8e-11 72.8 118 43.2
Thhalv10006997m.g Eutrema salsugineum HOM05D002498 ORTHO05D002553 7.5e-11 72.4 122 47.5
MSTRG.14437 Avicennia marina HOM05D002498 ORTHO05D002553 1.3e-10 71.6 136 43.4
Actinidia26030 Actinidia chinensis HOM05D002498 ORTHO05D002553 1.7e-10 71.2 115 45.2
AL1G29720 Arabidopsis lyrata HOM05D002498 ORTHO05D002553 1.7e-10 71.2 301 29.6
SalBow6G7152 Salvia bowleyana HOM05D002498 ORTHO05D002553 2.2e-10 70.9 112 47.3
Aqoxy1G00838 Aquilegia oxysepala HOM05D002498 ORTHO05D002553 2.9e-10 70.5 114 45.6
CiPaw.01G219200 Carya illinoinensis HOM05D002498 ORTHO05D002553 3.7e-10 70.1 185 35.7
Oeu007562.1 Olea europaea HOM05D002498 ORTHO05D002553 3.7e-10 70.1 126 44.4
Sabra01G0141500 Salix brachista HOM05D002498 ORTHO05D002553 6.4e-10 69.3 188 36.2
TAR633G2028 Trochodendron aralioides HOM05D002498 ORTHO05D002553 6.4e-10 69.3 163 39.9
Dinv30674 Davidia involucrata HOM05D002498 ORTHO05D002553 1.1e-09 68.6 119 46.2
Dinv34334 Davidia involucrata HOM05D002498 ORTHO05D002553 1.1e-09 68.6 119 46.2
THA.LOC104808053 Tarenaya hassleriana HOM05D002498 ORTHO05D002553 1.9e-09 67.8 183 36.1
CsaV3_7G034500 Cucumis sativus L. HOM05D002498 ORTHO05D002553 2.4e-09 67.4 128 41.4
Nitab4.5_0012529g0010 Nicotiana tabacum HOM05D002498 ORTHO05D002553 2.4e-09 67.4 116 44.0
QL05p007807 Quercus lobata HOM05D002498 ORTHO05D002553 2.4e-09 67.4 121 43.0
MD17G1168400 Malus domestica HOM05D002498 ORTHO05D002553 3.2e-09 67.0 210 35.2
Thecc.06G119300 Theobroma cacao HOM05D002498 ORTHO05D002553 4.1e-09 66.6 224 33.9
CDE09G0028 Ceratophyllum demersum HOM05D002498 ORTHO05D002553 5.4e-09 66.2 120 44.2
Sabra03G0037700 Salix brachista HOM05D002498 ORTHO05D002553 7.0e-09 65.9 142 42.3
Actinidia39082 Actinidia chinensis HOM05D002498 ORTHO05D002553 9.2e-09 65.5 180 33.9
GSVIVG01016770001 Vitis vinifera HOM05D002498 ORTHO05D002553 1.2e-08 65.1 136 41.9
Hma1.2p1_0291F.1_g115140 Hydrangea macrophylla HOM05D002498 ORTHO05D002553 2.7e-08 63.9 112 44.6
CDE02G1135 Ceratophyllum demersum HOM05D002498 ORTHO05D002553 3.5e-08 63.5 201 33.8
Potri.003G064100 Populus trichocarpa HOM05D002498 ORTHO05D002553 3.5e-08 63.5 188 34.0
Gohir.A06G193600 Gossypium hirsutum HOM05D002498 ORTHO05D002553 4.6e-08 63.2 164 37.2
Gohir.D06G201400 Gossypium hirsutum HOM05D002498 ORTHO05D002553 4.6e-08 63.2 164 37.2
Gorai.010G235100 Gossypium raimondii HOM05D002498 ORTHO05D002553 4.6e-08 63.2 164 37.2
SalBow6G1630 Salvia bowleyana HOM05D002498 ORTHO05D002553 1.0e-07 62.0 104 47.1
Glyma.07G037600 Glycine max HOM05D002498 ORTHO05D002553 1.3e-07 61.6 208 33.2
Lj5C37T8 Lonicera japonica HOM05D002498 ORTHO05D002553 1.3e-07 61.6 110 44.5
MBI14_g32128_MAGBIO Magnolia biondii HOM05D002498 ORTHO05D002553 1.3e-07 61.6 95 52.6
Carub.0001s1720 Capsella rubella HOM05D002498 ORTHO05D002553 1.7e-07 61.2 86 51.2
CARHR018030 Cardamine hirsuta HOM05D002498 ORTHO05D002553 1.7e-07 61.2 177 34.5
MD09G1184100 Malus domestica HOM05D002498 ORTHO05D002553 1.7e-07 61.2 133 41.4
Manes.04G144200 Manihot esculenta HOM05D002498 ORTHO05D002553 1.7e-07 61.2 143 39.2
FAN05G3736 Fragaria x ananassa HOM05D002498 ORTHO05D002553 2.3e-07 60.8 117 41.0
Phvul.010G130700 Phaseolus vulgaris HOM05D002498 ORTHO05D002553 2.3e-07 60.8 222 33.8
SGA_v2.0_scaffold71G23856 Striga asiatica HOM05D002498 ORTHO05D002553 3.0e-07 60.5 145 38.6
ClCG09G000950 Citrullus lanatus HOM05D002498 ORTHO05D002553 3.9e-07 60.1 293 29.0
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 5.0e-07 59.7 117 41.0
Prupe.3G042400 Prunus persica HOM05D002498 ORTHO05D002553 8.6e-07 58.9 123 40.7
Duzib192G0999 Durio zibethinus HOM05D002498 ORTHO05D002553 1.5e-06 58.2 115 44.3
ECA247G3107 Erigeron canadensis HOM05D002498 ORTHO05D002553 1.5e-06 58.2 165 38.8
FvH4_6g34640 Fragaria vesca HOM05D002498 ORTHO05D002553 1.5e-06 58.2 117 40.2
FAN09G3304 Fragaria x ananassa HOM05D002498 ORTHO05D002553 1.5e-06 58.2 117 40.2
FAN14G0943 Fragaria x ananassa HOM05D002498 ORTHO05D002553 1.5e-06 58.2 117 40.2
Atru.chr1.3950 Acer truncatum HOM05D002498 ORTHO05D002553 2.5e-06 57.4 185 34.1
Aa31LG4G2990 Aethionema arabicum HOM05D002498 ORTHO05D002553 2.5e-06 57.4 322 30.4
MELO3C024357.2 Cucumis melo HOM05D002498 ORTHO05D002553 2.5e-06 57.4 290 30.7
Duzib235G0745 Durio zibethinus HOM05D002498 ORTHO05D002553 2.5e-06 57.4 122 41.0
Medtr8g020480 Medicago truncatula HOM05D002498 ORTHO05D002553 2.5e-06 57.4 135 39.3
Cc11_g03670 Coffea canephora HOM05D002498 ORTHO05D002553 3.3e-06 57.0 117 42.7
Lalb_Chr01g0013581 Lupinus albus HOM05D002498 ORTHO05D002553 3.3e-06 57.0 137 38.0
CANSAT56G2749 Cannabis sativa HOM05D002498 ORTHO05D002553 4.3e-06 56.6 224 33.0
arahy.Tifrunner.gnm1.ann1.U78AI9 Arachis hypogaea HOM05D002498 ORTHO05D002553 7.3e-06 55.8 137 38.7
Gohir.A10G053200 Gossypium hirsutum HOM05D002498 ORTHO05D002553 9.5e-06 55.5 216 31.0


User provided reference genes

Program Settings