Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 5.8e-118 427.6 212 100.0
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 6.5e-61 238.0 202 55.9
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 3.2e-60 235.7 204 55.4
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 1.0e-58 230.7 171 60.8
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 1.3e-58 230.3 207 54.1
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 1.3e-58 230.3 207 54.1
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 3.0e-58 229.2 206 55.3
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 8.7e-58 227.6 204 55.9
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 1.5e-57 226.9 208 55.8
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 1.9e-57 226.5 209 53.6
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 4.3e-57 225.3 203 56.2
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 4.3e-57 225.3 207 53.6
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 5.7e-57 224.9 202 57.4
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 7.4e-57 224.6 219 53.0
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.3e-56 223.8 175 62.3
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 6.3e-56 221.5 179 55.3
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 1.4e-55 220.3 201 53.7
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 1.4e-55 220.3 204 53.4
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 1.8e-55 219.9 209 53.6
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 5.3e-55 218.4 201 54.2
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 5.3e-55 218.4 201 52.7
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 6.9e-55 218.0 210 53.8
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 6.9e-55 218.0 205 53.7
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 6.9e-55 218.0 204 52.5
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 1.2e-54 217.2 201 54.2
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 1.2e-54 217.2 201 52.7
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 1.5e-54 216.9 211 52.1
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 2.0e-54 216.5 171 58.5
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 2.0e-54 216.5 208 51.0
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 3.4e-54 215.7 209 51.7
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-54 215.3 204 50.5
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-54 215.3 204 50.5
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-54 215.3 204 50.5
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 4.5e-54 215.3 204 50.5
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 7.7e-54 214.5 182 57.7
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 7.7e-54 214.5 182 57.7
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 1.3e-53 213.8 202 53.5
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 1.3e-53 213.8 191 55.5
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 1.7e-53 213.4 175 57.1
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 2.2e-53 213.0 195 51.8
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 2.2e-53 213.0 203 50.2
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 3.8e-53 212.2 204 51.0
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 5.0e-53 211.8 212 51.9
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 5.0e-53 211.8 211 54.0
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 5.0e-53 211.8 210 51.9
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 6.5e-53 211.5 202 53.5
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 8.5e-53 211.1 208 53.4
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 8.5e-53 211.1 202 52.5
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 1.1e-52 210.7 207 52.7
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 1.1e-52 210.7 204 50.0
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 1.1e-52 210.7 232 49.6
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 1.4e-52 210.3 208 53.4
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 1.9e-52 209.9 169 59.2
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 2.5e-52 209.5 197 53.3
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 2.5e-52 209.5 201 52.2
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 2.5e-52 209.5 204 49.5
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 3.2e-52 209.1 193 55.4
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 3.2e-52 209.1 207 54.1
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 4.2e-52 208.8 196 53.1
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 5.5e-52 208.4 195 51.8
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 5.5e-52 208.4 168 57.7
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 5.5e-52 208.4 210 53.8
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 5.5e-52 208.4 210 53.8
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 7.2e-52 208.0 196 54.1
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 7.2e-52 208.0 201 52.7
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 7.2e-52 208.0 205 50.2
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 1.6e-51 206.8 189 54.5
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 2.1e-51 206.5 175 55.4
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 2.1e-51 206.5 200 48.5
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 4.6e-51 205.3 200 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 4.6e-51 205.3 211 49.8
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 4.6e-51 205.3 202 50.5
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 6.1e-51 204.9 168 57.7
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 6.1e-51 204.9 211 48.8
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 6.1e-51 204.9 174 56.3
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 1.4e-50 203.8 175 55.4
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 1.8e-50 203.4 201 51.2
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 3.0e-50 202.6 202 49.5
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 3.9e-50 202.2 175 54.9
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 3.9e-50 202.2 172 51.7
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 3.9e-50 202.2 202 50.5
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 5.1e-50 201.8 204 49.5
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 6.7e-50 201.4 203 49.8
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 6.7e-50 201.4 203 49.8
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 1.1e-49 200.7 194 53.1
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 1.5e-49 200.3 173 54.9
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.5e-49 200.3 209 50.7
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 1.5e-49 200.3 206 50.0
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 1.5e-49 200.3 201 48.3
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 2.0e-49 199.9 194 53.1
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 2.5e-49 199.5 173 54.3
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 2.5e-49 199.5 210 49.0
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 4.3e-49 198.7 209 46.9
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 4.3e-49 198.7 212 49.5
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 7.4e-49 198.0 197 49.2
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 9.7e-49 197.6 209 46.4
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 1.3e-48 197.2 209 45.9
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 2.8e-48 196.1 209 51.2
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 3.7e-48 195.7 175 52.0
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 3.7e-48 195.7 215 49.8
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 4.8e-48 195.3 202 51.0
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 1.4e-47 193.7 169 55.6
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 2.4e-47 193.0 203 48.3
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 3.1e-47 192.6 200 48.5
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 4.1e-47 192.2 169 54.4
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 4.1e-47 192.2 149 59.1
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 1.4e-44 183.7 216 48.1
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 3.6e-43 179.1 135 62.2
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 2.0e-38 163.3 128 55.5
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 2.7e-35 152.9 175 47.4
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 4.0e-34 149.1 163 44.8
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 4.1e-31 139.0 163 46.0
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 1.2e-30 137.5 200 37.5
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 7.2e-28 128.3 101 61.4
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 1.6e-27 127.1 134 47.8
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 4.0e-26 122.5 143 41.3
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 1.5e-20 104.0 85 57.6
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 1.0e-18 97.8 75 56.0
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 1.4e-15 87.4 62 62.9
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 1.2e-14 84.3 157 36.9
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 5.9e-14 82.0 112 36.6
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 5.0e-13 79.0 74 50.0
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 1.1e-12 77.8 90 47.8
A08p23210 Brassica napus HOM05D005879 ORTHO05D007432 1.9e-12 77.0 51 64.7
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 9.5e-12 74.7 149 28.2
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 1.0e-10 71.2 161 32.3
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 1.8e-10 70.5 175 32.6
Cfa025806 Carpinus fangiana HOM05D005879 ORTHO05D123935 7.5e-09 65.1 110 30.0
Pp3c4_21480 Physcomitrium patens HOM05D005879 ORTHO05D007432 8.3e-08 61.6 59 49.2


User provided reference genes

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