Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25661 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 3.8e-108 394.8 196 100.0
SEGI_41343 Sequoiadendron giganteum HOM05D008798 ORTHO05D011016 2.0e-48 196.4 107 88.8
ATR0763G057 Amborella trichopoda HOM05D008798 ORTHO05D011016 6.7e-20 101.7 105 41.0
TAR626G1932 Trochodendron aralioides HOM05D008798 ORTHO05D011016 3.3e-19 99.4 104 43.3
Potri.001G081100 Populus trichocarpa HOM05D008798 ORTHO05D011016 1.3e-18 97.4 107 44.9
Cfa000742 Carpinus fangiana HOM05D008798 ORTHO05D011016 8.2e-18 94.7 107 42.1
Eucgr.E02024 Eucalyptus grandis HOM05D008798 ORTHO05D011016 8.2e-18 94.7 181 33.1
Duzib160G0760 Durio zibethinus HOM05D008798 ORTHO05D011016 3.1e-17 92.8 107 43.0
Eucgr.E04362 Eucalyptus grandis HOM05D008798 ORTHO05D011016 4.1e-17 92.4 181 32.6
SEGI_12238 Sequoiadendron giganteum HOM05D001206 ORTHO05D002068 5.3e-17 92.0 94 61.7
SEGI_34815 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 5.3e-17 92.0 116 52.6
TWI09G1085 Tripterygium wilfordii HOM05D008798 ORTHO05D011016 6.9e-17 91.7 104 46.2
Atru.chr5.2787 Acer truncatum HOM05D008798 ORTHO05D011016 1.2e-16 90.9 105 43.8
HPP92_012287 Vanilla planifolia HOM05D006462 ORTHO05D008067 1.2e-16 90.9 149 35.6
Dinv15940 Davidia involucrata HOM05D008798 ORTHO05D011016 2.0e-16 90.1 104 42.3
Dinv15941 Davidia involucrata HOM05D008798 ORTHO05D011016 2.0e-16 90.1 104 42.3
SEGI_03042 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 2.0e-16 90.1 96 59.4
SEGI_10977 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 4.5e-16 89.0 94 59.6
SEGI_12401 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 7.7e-16 88.2 59 81.4
SEGI_14519 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 7.7e-16 88.2 59 81.4
SEGI_16985 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 7.7e-16 88.2 59 79.7
SEGI_24466 Sequoiadendron giganteum HOM05D006301 ORTHO05D012121 7.7e-16 88.2 94 58.5
CSS0041632 Camellia sinensis var. sinensis HOM05D008798 ORTHO05D011016 1.3e-15 87.4 105 39.0
Thecc.06G136100 Theobroma cacao HOM05D008798 ORTHO05D011016 6.5e-15 85.1 108 39.8
Gohir.D10G047800 Gossypium hirsutum HOM05D008798 ORTHO05D011016 8.5e-15 84.7 107 39.3
Gorai.011G050900 Gossypium raimondii HOM05D008798 ORTHO05D011016 8.5e-15 84.7 107 39.3
SEGI_05671 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 8.5e-15 84.7 106 52.8
Rhsim13G0127600 Rhododendron simsii HOM05D008798 ORTHO05D011016 1.1e-14 84.3 109 35.8
Manes.16G054300 Manihot esculenta HOM05D008798 ORTHO05D011016 1.4e-14 84.0 107 41.1
SEGI_30979 Sequoiadendron giganteum HOM05D006301 ORTHO05D012121 1.9e-14 83.6 96 56.2
Potri.003G149300 Populus trichocarpa HOM05D008798 ORTHO05D011016 2.5e-14 83.2 107 37.4
Ciclev10015548m.g Citrus clementina HOM05D008798 ORTHO05D011016 3.2e-14 82.8 108 40.7
SEGI_10775 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 5.5e-14 82.0 61 73.8
SEGI_28033 Sequoiadendron giganteum HOM05D006301 ORTHO05D012121 7.2e-14 81.6 76 61.8
CiPaw.09G150900 Carya illinoinensis HOM05D008798 ORTHO05D011016 9.4e-14 81.3 105 39.0
SEGI_17430 Sequoiadendron giganteum HOM05D006301 ORTHO05D012121 2.1e-13 80.1 53 81.1
Gohir.A10G046500 Gossypium hirsutum HOM05D008798 ORTHO05D011016 2.7e-13 79.7 148 31.1
Haze_05995 Corylus avellana HOM05D008798 ORTHO05D011016 4.6e-13 79.0 78 46.2
SEGI_39540 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 4.6e-13 79.0 52 80.8
vmacro03488 Vaccinium macrocarpon HOM05D008798 ORTHO05D011016 2.3e-12 76.6 106 34.9
Pp3c23_9830 Physcomitrium patens HOM05D008798 ORTHO05D011016 3.0e-12 76.3 112 37.5
Os03g0777600 Oryza sativa ssp. japonica HOM05D008798 ORTHO05D011016 6.7e-12 75.1 104 37.5
Pp3c20_17720 Physcomitrium patens HOM05D008798 ORTHO05D011016 6.7e-12 75.1 112 38.4
SMO367G1240 Selaginella moellendorffii HOM05D009232 ORTHO05D013348 2.0e-11 73.6 112 33.9
Pp3c9_15430 Physcomitrium patens HOM05D008798 ORTHO05D011016 3.3e-11 72.8 109 34.9
DCAR_003802 Daucus carota HOM05D008798 ORTHO05D011016 4.3e-11 72.4 107 32.7
SEGI_08123 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 7.4e-11 71.6 55 72.7
Zm00001eb213680 Zea mays HOM05D008798 ORTHO05D011016 9.7e-11 71.2 108 37.0
Pp3c9_12300 Physcomitrium patens HOM05D008798 ORTHO05D011016 2.2e-10 70.1 110 36.4
Mapoly0044s0079 Marchantia polymorpha HOM05D008798 ORTHO05D011016 1.4e-09 67.4 110 32.7
AagrBONN_evm.TU.Sc2ySwM_344.179 Anthoceros agrestis HOM05D008798 ORTHO05D011016 5.3e-09 65.5 110 30.9
SEGI_18746 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 5.3e-09 65.5 95 46.3
Zm00001eb123420 Zea mays HOM05D008798 ORTHO05D011016 3.4e-08 62.8 76 40.8
SEGI_29158 Sequoiadendron giganteum HOM05D000550 ORTHO05D000400 4.5e-08 62.4 45 75.6
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 5.9e-08 62.0 37 73.0
SEGI_37296 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 8.5e-07 58.2 35 80.0
SEGI_40231 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 8.5e-07 58.2 35 80.0
SEGI_05961 Sequoiadendron giganteum HOM05D000054 ORTHO05D008307 3.2e-06 56.2 35 74.3
SEGI_06775 Sequoiadendron giganteum HOM05D000054 ORTHO05D000171 3.2e-06 56.2 35 74.3


User provided reference genes

Program Settings