Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25621 Sequoiadendron giganteum HOM05D007024 ORTHO05D008865 2.8e-55 218.4 110 100.0
CSS0004845 Camellia sinensis var. sinensis HOM05D007024 ORTHO05D008865 6.6e-25 117.5 77 74.0
Ca_08817_v3 Cicer arietinum L. HOM05D007024 ORTHO05D008865 6.6e-25 117.5 78 73.1
Phvul.001G173900 Phaseolus vulgaris HOM05D007024 ORTHO05D008865 6.6e-25 117.5 78 74.4
Dinv35695 Davidia involucrata HOM05D001458 ORTHO05D006787 8.6e-25 117.1 78 70.5
PGR004G2860 Punica granatum HOM05D007024 ORTHO05D008865 1.1e-24 116.7 84 67.9
TPR.G39424 Trifolium pratense HOM05D007024 ORTHO05D008865 1.1e-24 116.7 78 73.1
Lalb_Chr20g0112901 Lupinus albus HOM05D007024 ORTHO05D008865 1.5e-24 116.3 76 71.1
MBI18_g34970_MAGBIO Magnolia biondii HOM05D007024 ORTHO05D008865 1.9e-24 115.9 85 65.9
GSVIVG01025554001 Vitis vinifera HOM05D007024 ORTHO05D008865 1.9e-24 115.9 76 72.4
Medtr7g100540 Medicago truncatula HOM05D007024 ORTHO05D008865 2.5e-24 115.5 78 70.5
VMungo1383G1891 Vigna mungo HOM05D007024 ORTHO05D008865 2.5e-24 115.5 78 73.1
Glyma.19G177600 Glycine max HOM05D007024 ORTHO05D008865 3.3e-24 115.2 78 71.8
Lj1g0023744 Lotus japonicus HOM05D007024 ORTHO05D008865 4.3e-24 114.8 78 70.5
Hma1.2p1_0111F.1_g053680 Hydrangea macrophylla HOM05D007024 ORTHO05D008865 7.3e-24 114.0 78 70.5
Psat3g045960 Pisum sativum HOM05D007024 ORTHO05D008865 9.5e-24 113.6 76 72.4
SGA_v2.0_scaffold94G28656 Striga asiatica HOM05D007024 ORTHO05D008865 1.2e-23 113.2 76 71.1
arahy.Tifrunner.gnm1.ann1.4131RS Arachis hypogaea HOM05D007024 ORTHO05D008865 1.6e-23 112.8 87 64.4
CiPaw.09G183100 Carya illinoinensis HOM05D007024 ORTHO05D008865 1.6e-23 112.8 87 62.1
Haze_20672 Corylus avellana HOM05D007024 ORTHO05D008865 1.6e-23 112.8 78 70.5
Lsat_1_v5_gn_2_109921 Lactuca sativa HOM05D007024 ORTHO05D008865 1.6e-23 112.8 75 69.3
Nitab4.5_0000848g0140 Nicotiana tabacum HOM05D007024 ORTHO05D008865 1.6e-23 112.8 78 70.5
Potri.006G133100 Populus trichocarpa HOM05D007024 ORTHO05D008865 1.6e-23 112.8 76 69.7
Duzib106G2062 Durio zibethinus HOM05D007024 ORTHO05D008865 2.1e-23 112.5 76 71.1
ATR0582G226 Amborella trichopoda HOM05D007024 ORTHO05D008865 2.8e-23 112.1 83 63.9
Oeu029107.1 Olea europaea HOM05D007024 ORTHO05D008865 2.8e-23 112.1 76 69.7
Cfa017486 Carpinus fangiana HOM05D007024 ORTHO05D008865 3.6e-23 111.7 78 69.2
Lj3A977T52 Lonicera japonica HOM05D007024 ORTHO05D008865 4.7e-23 111.3 78 64.1
Nn2g10613 Nelumbo nucifera HOM05D007024 ORTHO05D008865 4.7e-23 111.3 76 68.4
vmacro08688 Vaccinium macrocarpon HOM05D007024 ORTHO05D008865 4.7e-23 111.3 76 69.7
Ciclev10013683m.g Citrus clementina HOM05D007024 ORTHO05D008865 6.2e-23 110.9 80 63.8
Sabra06G0104600 Salix brachista HOM05D007024 ORTHO05D008865 6.2e-23 110.9 76 68.4
Nitab4.5_0010883g0010 Nicotiana tabacum HOM05D007024 ORTHO05D008865 1.1e-22 110.2 78 69.2
MD12G1128400 Malus domestica HOM05D007024 ORTHO05D008865 1.4e-22 109.8 78 67.9
Manes.09G070900 Manihot esculenta HOM05D007024 ORTHO05D008865 1.4e-22 109.8 76 68.4
TAR633G0628 Trochodendron aralioides HOM05D007024 ORTHO05D008865 1.4e-22 109.8 75 70.7
Eucgr.K03198 Eucalyptus grandis HOM05D007024 ORTHO05D008865 1.8e-22 109.4 74 68.9
Thecc.05G052000 Theobroma cacao HOM05D007024 ORTHO05D008865 1.8e-22 109.4 85 63.5
Aqoxy4G03151 Aquilegia oxysepala HOM05D007024 ORTHO05D008865 2.4e-22 109.0 76 68.4
Hund12062 Selenicereus undatus HOM05D007024 ORTHO05D008865 2.4e-22 109.0 87 59.8
Solyc09g007190.3 Solanum lycopersicum HOM05D007024 ORTHO05D008865 2.4e-22 109.0 78 69.2
PGSC0003DMG400027897 Solanum tuberosum HOM05D007024 ORTHO05D008865 2.4e-22 109.0 78 69.2
Zm00001eb013030 Zea mays HOM05D007024 ORTHO05D008865 2.4e-22 109.0 76 68.4
CANSAT80G1842 Cannabis sativa HOM05D007024 ORTHO05D008865 3.1e-22 108.6 77 66.2
Sopen09g002060 Solanum pennellii HOM05D007024 ORTHO05D008865 3.1e-22 108.6 78 69.2
ECA238G1489 Erigeron canadensis HOM05D007024 ORTHO05D008865 4.0e-22 108.2 77 63.6
Migut.L01652 Erythranthe guttata HOM05D007024 ORTHO05D008865 4.0e-22 108.2 76 67.1
FAN02G0668 Fragaria x ananassa HOM05D007024 ORTHO05D008865 4.0e-22 108.2 86 61.6
Os03g0284600 Oryza sativa ssp. japonica HOM05D007024 ORTHO05D008865 4.0e-22 108.2 75 66.7
Peaxi162Scf01517g00138 Petunia axillaris HOM05D007024 ORTHO05D008865 4.0e-22 108.2 78 67.9
COL.COLO4_10283 Corchorus olitorius HOM05D007024 ORTHO05D008865 5.2e-22 107.8 76 67.1
CsaV3_4G024400 Cucumis sativus L. HOM05D007024 ORTHO05D008865 5.2e-22 107.8 78 66.7
FAN09G4212 Fragaria x ananassa HOM05D007024 ORTHO05D008865 5.2e-22 107.8 77 66.2
HanXRQChr05g0129231 Helianthus annuus HOM05D007024 ORTHO05D008865 5.2e-22 107.8 77 66.2
HPP92_003601 Vanilla planifolia HOM05D007024 ORTHO05D008865 5.2e-22 107.8 80 63.8
Atru.chr8.2534 Acer truncatum HOM05D007024 ORTHO05D008865 6.8e-22 107.5 76 65.8
SMO353G0397 Selaginella moellendorffii HOM05D007024 ORTHO05D008865 6.8e-22 107.5 64 75.0
Sc20g0004190 Simmondsia chinensis HOM05D007024 ORTHO05D008865 6.8e-22 107.5 75 70.7
CAN.G350.48 Capsicum annuum HOM05D007024 ORTHO05D008865 8.9e-22 107.1 78 66.7
TWI74G0989 Tripterygium wilfordii HOM05D007024 ORTHO05D008865 8.9e-22 107.1 64 76.6
FvH4_6g15080 Fragaria vesca HOM05D007024 ORTHO05D008865 1.5e-21 106.3 86 60.5
PSO063G4670 Papaver somniferum HOM05D007024 ORTHO05D008865 1.5e-21 106.3 74 68.9
QL07p045588 Quercus lobata HOM05D007024 ORTHO05D008865 1.5e-21 106.3 76 67.1
Aa31LG5G22570 Aethionema arabicum HOM05D007024 ORTHO05D008865 2.6e-21 105.5 84 59.5
FAN14G4602 Fragaria x ananassa HOM05D007024 ORTHO05D007145 2.6e-21 105.5 86 60.5
Gohir.A09G160700 Gossypium hirsutum HOM05D007024 ORTHO05D008865 2.6e-21 105.5 76 67.1
Gohir.D09G156400 Gossypium hirsutum HOM05D007024 ORTHO05D008865 2.6e-21 105.5 76 67.1
RcHm_v2.0_Chr3g0468261 Rosa chinensis HOM05D007024 ORTHO05D008865 2.6e-21 105.5 74 67.6
Sed0013795 Sechium edule HOM05D007024 ORTHO05D008865 2.6e-21 105.5 79 64.6
AT2G37240 Arabidopsis thaliana HOM05D007024 ORTHO05D008865 3.4e-21 105.1 79 64.6
ClCG04G008760 Citrullus lanatus HOM05D007024 ORTHO05D008865 3.4e-21 105.1 78 65.4
Thhalv10017137m.g Eutrema salsugineum HOM05D007024 ORTHO05D008865 3.4e-21 105.1 86 59.3
Manes.08G001700 Manihot esculenta HOM05D007024 ORTHO05D008865 3.4e-21 105.1 69 71.0
Carub.0004s1915 Capsella rubella HOM05D007024 ORTHO05D008865 4.4e-21 104.8 84 60.7
Gorai.006G177900 Gossypium raimondii HOM05D007024 ORTHO05D008865 5.8e-21 104.4 76 65.8
Sp4g19560 Schrenkiella parvula HOM05D007024 ORTHO05D008865 5.8e-21 104.4 86 59.3
unitig_746.g26783 Utricularia gibba HOM05D007024 ORTHO05D008865 5.8e-21 104.4 79 65.8
Cc06_g03440 Coffea canephora HOM05D007024 ORTHO05D008865 1.3e-20 103.2 65 72.3
PSO782G5617 Papaver somniferum HOM05D007024 ORTHO05D008865 1.3e-20 103.2 74 64.9
THA.LOC104805324 Tarenaya hassleriana HOM05D007024 ORTHO05D008865 1.3e-20 103.2 86 58.1
CARHR132350 Cardamine hirsuta HOM05D007024 ORTHO05D008865 2.2e-20 102.4 84 58.3
AL4G33620 Arabidopsis lyrata HOM05D007024 ORTHO05D008865 2.9e-20 102.1 84 58.3
BcaC02g11844 Brassica carinata HOM05D007024 ORTHO05D008865 2.9e-20 102.1 86 58.1
A05p08660 Brassica napus HOM05D007024 ORTHO05D008865 2.9e-20 102.1 86 58.1
BraA05t19834Z Brassica rapa HOM05D007024 ORTHO05D008865 2.9e-20 102.1 86 58.1
BcaB02g09297 Brassica carinata HOM05D007024 ORTHO05D008865 4.9e-20 101.3 86 58.1
C04p10750 Brassica napus HOM05D007024 ORTHO05D008865 4.9e-20 101.3 86 58.1
BolC4t22670H Brassica oleracea HOM05D007024 ORTHO05D008865 4.9e-20 101.3 86 58.1
CDE04G0730 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 1.4e-19 99.8 82 58.5
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis HOM05D007024 ORTHO05D008865 2.4e-19 99.0 82 59.8
Actinidia05279 Actinidia chinensis HOM05D007024 ORTHO05D008865 2.1e-18 95.9 70 70.0
CBR_g9017 Chara braunii HOM05D001161 ORTHO05D000497 5.6e-16 87.8 73 52.1
Mapoly0154s0013 Marchantia polymorpha HOM05D007024 ORTHO05D008865 2.8e-15 85.5 70 61.4
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 4.7e-15 84.7 69 65.2
Prupe.6G244000 Prunus persica HOM05D007024 ORTHO05D008865 4.0e-14 81.6 59 61.0
Zm00001eb110150 Zea mays HOM05D007024 ORTHO05D008865 7.6e-13 77.4 53 67.9
MELO3C003072.2 Cucumis melo HOM05D007024 ORTHO05D008865 2.4e-11 72.4 78 51.3
CDE07G1737 Ceratophyllum demersum HOM05D007024 ORTHO05D008865 3.0e-09 65.5 65 55.4
CiPaw.09G182700 Carya illinoinensis HOM05D007024 ORTHO05D008865 4.3e-08 61.6 45 60.0
Thhalv10004770m.g Eutrema salsugineum HOM05D004917 ORTHO05D005954 7.3e-08 60.8 85 41.2
Aqoxy1G00260 Aquilegia oxysepala HOM05D004917 ORTHO05D005954 9.6e-08 60.5 97 36.1
vmacro18012 Vaccinium macrocarpon HOM05D004917 ORTHO05D005954 1.3e-07 60.1 75 40.0
AL8G43550 Arabidopsis lyrata HOM05D004917 ORTHO05D005954 1.6e-07 59.7 85 38.8
AT5G65840 Arabidopsis thaliana HOM05D004917 ORTHO05D005954 1.6e-07 59.7 85 38.8
Carub.0008s2673 Capsella rubella HOM05D004917 ORTHO05D005954 2.1e-07 59.3 85 37.6
SalBow5G1886 Salvia bowleyana HOM05D004917 ORTHO05D005954 2.1e-07 59.3 80 37.5
Rhsim08G0090300 Rhododendron simsii HOM05D004917 ORTHO05D005954 2.8e-07 58.9 75 40.0
CANSAT01G2436 Cannabis sativa HOM05D004917 ORTHO05D005954 3.6e-07 58.5 74 37.8
PSO170G3322 Papaver somniferum HOM05D004917 ORTHO05D005954 3.6e-07 58.5 75 40.0
PGR102G2131 Punica granatum HOM05D004917 ORTHO05D005954 4.8e-07 58.2 74 43.2
VMungo0251G1412 Vigna mungo HOM05D004917 ORTHO05D005954 4.8e-07 58.2 75 40.0
Glyma.17G158400 Glycine max HOM05D004917 ORTHO05D005954 6.2e-07 57.8 75 36.0
Cpa.g.sc45.24 Carica papaya HOM05D007024 ORTHO05D008865 8.1e-07 57.4 35 77.1
VMungo0251G2665 Vigna mungo HOM05D004917 ORTHO05D005954 8.1e-07 57.4 75 38.7
Gorai.011G108500 Gossypium raimondii HOM05D004917 ORTHO05D005954 1.1e-06 57.0 76 38.2
Sp2g28930 Schrenkiella parvula HOM05D004917 ORTHO05D005954 1.1e-06 57.0 84 36.9
EL10Ac6g15593 Beta vulgaris HOM05D004917 ORTHO05D005954 1.4e-06 56.6 78 39.7
CARHR279840 Cardamine hirsuta HOM05D004917 ORTHO05D005954 1.4e-06 56.6 84 36.9
Gohir.A10G089200 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.4e-06 56.6 76 38.2
Gohir.D10G098900 Gossypium hirsutum HOM05D004917 ORTHO05D005954 1.4e-06 56.6 76 38.2
PSO017G2694 Papaver somniferum HOM05D004917 ORTHO05D005954 1.8e-06 56.2 75 38.7
BcaB04g20033 Brassica carinata HOM05D004917 ORTHO05D005954 4.0e-06 55.1 85 37.6
BcaB04g20036 Brassica carinata HOM05D004917 ORTHO05D005954 4.0e-06 55.1 85 37.6
A09p09210 Brassica napus HOM05D004917 ORTHO05D005954 4.0e-06 55.1 85 37.6
BraA09t36573Z Brassica rapa HOM05D004917 ORTHO05D005954 4.0e-06 55.1 85 37.6
COL.COLO4_11616 Corchorus olitorius HOM05D004917 ORTHO05D005954 4.0e-06 55.1 79 40.5
QL06p038910 Quercus lobata HOM05D004917 ORTHO05D005954 5.3e-06 54.7 94 34.0
AagrBONN_evm.TU.Sc2ySwM_368.1530 Anthoceros agrestis HOM05D004917 ORTHO05D005954 6.9e-06 54.3 79 35.4
QL06p038930 Quercus lobata HOM05D004917 ORTHO05D005954 6.9e-06 54.3 75 40.0
Os03g0729300 Oryza sativa ssp. japonica HOM05D004917 ORTHO05D005954 9.0e-06 53.9 83 39.8


User provided reference genes

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