Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25603 Sequoiadendron giganteum HOM05D004808 ORTHO05D005279 5.8e-155 550.8 274 100.0
Nn7g36662 Nelumbo nucifera HOM05D004808 ORTHO05D005279 4.8e-24 115.9 192 39.6
MBI13_g32777_MAGBIO Magnolia biondii HOM05D004808 ORTHO05D005279 5.3e-23 112.5 223 36.8
TAR633G2565 Trochodendron aralioides HOM05D004808 ORTHO05D005279 7.6e-22 108.6 193 38.9
TAR636G2671 Trochodendron aralioides HOM05D004808 ORTHO05D005279 2.7e-19 100.1 206 37.9
CANSAT54G0995 Cannabis sativa HOM05D004808 ORTHO05D005279 1.4e-18 97.8 191 36.1
VMungo0647G2208 Vigna mungo HOM05D004808 ORTHO05D005279 1.5e-17 94.4 182 36.3
Dinv05059 Davidia involucrata HOM05D004808 ORTHO05D005279 2.5e-17 93.6 192 36.5
Manes.01G179900 Manihot esculenta HOM05D004808 ORTHO05D005279 3.3e-17 93.2 196 33.7
Prupe.4G267700 Prunus persica HOM05D004808 ORTHO05D005279 4.3e-17 92.8 216 31.0
CiPaw.14G113900 Carya illinoinensis HOM05D004808 ORTHO05D005279 5.7e-17 92.4 183 34.4
LjContig00049g0025092 Lotus japonicus HOM05D004808 ORTHO05D005279 5.7e-17 92.4 219 33.3
Lalb_Chr04g0249181 Lupinus albus HOM05D004808 ORTHO05D005279 7.4e-17 92.0 220 35.0
Haze_23219 Corylus avellana HOM05D004808 ORTHO05D005279 9.7e-17 91.7 195 34.4
Ca_25925_v3 Cicer arietinum L. HOM05D004808 ORTHO05D005279 2.2e-16 90.5 219 33.3
PGR102G1223 Punica granatum HOM05D004808 ORTHO05D005279 2.2e-16 90.5 203 33.5
Atru.chr3.2780 Acer truncatum HOM05D004808 ORTHO05D005279 2.8e-16 90.1 178 36.0
FAN21G2036 Fragaria x ananassa HOM05D004808 ORTHO05D005279 2.8e-16 90.1 218 32.1
Lalb_Chr17g0347981 Lupinus albus HOM05D004808 ORTHO05D005279 3.7e-16 89.7 186 38.2
TPR.G19341 Trifolium pratense HOM05D004808 ORTHO05D005279 3.7e-16 89.7 188 36.7
FvH4_3g27990 Fragaria vesca HOM05D004808 ORTHO05D005279 4.8e-16 89.4 180 32.8
FAN11G1822 Fragaria x ananassa HOM05D004808 ORTHO05D005279 4.8e-16 89.4 180 32.8
Oeu043281.1 Olea europaea HOM05D004808 ORTHO05D005279 4.8e-16 89.4 188 35.1
Phvul.008G200400 Phaseolus vulgaris HOM05D004808 ORTHO05D005279 4.8e-16 89.4 182 34.6
CSS0046494 Camellia sinensis var. sinensis HOM05D004808 ORTHO05D005279 6.3e-16 89.0 206 35.4
Ca_06218_v3 Cicer arietinum L. HOM05D004808 ORTHO05D005279 8.2e-16 88.6 186 35.5
Glyma.02G280300 Glycine max HOM05D004808 ORTHO05D005279 2.4e-15 87.0 178 36.0
RcHm_v2.0_Chr5g0050681 Rosa chinensis HOM05D004808 ORTHO05D005279 2.4e-15 87.0 180 32.2
ClCG02G022910 Citrullus lanatus HOM05D004808 ORTHO05D005279 3.1e-15 86.7 188 34.0
FAN16G0786 Fragaria x ananassa HOM05D004808 ORTHO05D005279 3.1e-15 86.7 177 33.3
Aqoxy2G00360 Aquilegia oxysepala HOM05D004808 ORTHO05D005279 5.3e-15 85.9 188 34.6
Ca_29949_v3 Cicer arietinum L. HOM05D004808 ORTHO05D005279 6.9e-15 85.5 215 32.1
Glyma.14G034300 Glycine max HOM05D004808 ORTHO05D005279 6.9e-15 85.5 178 36.0
CSS0013669 Camellia sinensis var. sinensis HOM05D004808 ORTHO05D005279 1.2e-14 84.7 181 35.4
Lalb_Chr10g0106321 Lupinus albus HOM05D004808 ORTHO05D005279 1.5e-14 84.3 178 36.0
Manes.02G140500 Manihot esculenta HOM05D004808 ORTHO05D005279 2.0e-14 84.0 173 32.9
PGR119G1869 Punica granatum HOM05D004808 ORTHO05D005279 2.0e-14 84.0 192 34.9
unitig_699.g19143 Utricularia gibba HOM05D004808 ORTHO05D005279 2.0e-14 84.0 207 34.8
FAN25G2744 Fragaria x ananassa HOM05D004808 ORTHO05D005279 2.6e-14 83.6 180 32.2
Sc09g0000980 Simmondsia chinensis HOM05D004808 ORTHO05D005279 2.6e-14 83.6 178 34.3
QL01p017473 Quercus lobata HOM05D004808 ORTHO05D005279 3.4e-14 83.2 182 31.3
Thecc.09G249900 Theobroma cacao HOM05D004808 ORTHO05D005279 3.4e-14 83.2 177 32.8
Medtr5g089870 Medicago truncatula HOM05D004808 ORTHO05D005279 4.5e-14 82.8 187 36.4
unitig_27.g25005 Utricularia gibba HOM05D004808 ORTHO05D005279 4.5e-14 82.8 217 33.2
Oeu030627.1 Olea europaea HOM05D004808 ORTHO05D005279 7.7e-14 82.0 177 33.3
SEGI_24421 Sequoiadendron giganteum HOM05D004808 ORTHO05D005279 7.7e-14 82.0 158 36.1
AUR62006532 Chenopodium quinoa HOM05D004808 ORTHO05D005279 1.0e-13 81.6 178 34.3
Sed0009012 Sechium edule HOM05D004808 ORTHO05D005279 1.0e-13 81.6 273 27.8
Peaxi162Scf00004g00419 Petunia axillaris HOM05D004808 ORTHO05D005279 1.3e-13 81.3 195 31.3
Actinidia16374 Actinidia chinensis HOM05D004808 ORTHO05D005279 1.7e-13 80.9 179 36.9
Psat2g019840 Pisum sativum HOM05D004808 ORTHO05D005279 1.7e-13 80.9 179 35.8
Hund07444 Selenicereus undatus HOM05D004808 ORTHO05D005279 1.7e-13 80.9 173 34.1
Actinidia06956 Actinidia chinensis HOM05D004808 ORTHO05D005279 2.9e-13 80.1 181 34.8
arahy.Tifrunner.gnm1.ann1.P9AU08 Arachis hypogaea HOM05D004808 ORTHO05D005279 3.8e-13 79.7 213 31.9
Ciclev10014928m.g Citrus clementina HOM05D004808 ORTHO05D005279 3.8e-13 79.7 192 31.8
Oeu025900.1 Olea europaea HOM05D004808 ORTHO05D005279 3.8e-13 79.7 229 32.3
CiPaw.13G151800 Carya illinoinensis HOM05D004808 ORTHO05D005279 5.0e-13 79.3 191 33.5
AUR62000181 Chenopodium quinoa HOM05D004808 ORTHO05D005279 5.0e-13 79.3 178 33.7
arahy.Tifrunner.gnm1.ann1.ZK4BTX Arachis hypogaea HOM05D004808 ORTHO05D005279 6.5e-13 79.0 213 31.9
EL10Ac4g10157 Beta vulgaris HOM05D004808 ORTHO05D005279 8.5e-13 78.6 200 31.5
MELO3C014565.2 Cucumis melo HOM05D004808 ORTHO05D005279 8.5e-13 78.6 188 33.0
CsaV3_6G039040 Cucumis sativus L. HOM05D004808 ORTHO05D005279 8.5e-13 78.6 188 33.0
Glyma.18G118400 Glycine max HOM05D004808 ORTHO05D005279 1.1e-12 78.2 220 30.5
Potri.001G276800 Populus trichocarpa HOM05D004808 ORTHO05D005279 1.4e-12 77.8 187 29.4
EL10Ac4g10134 Beta vulgaris HOM05D004808 ORTHO05D005279 5.5e-12 75.9 175 33.7
EL10Ac4g10153 Beta vulgaris HOM05D004808 ORTHO05D005279 5.5e-12 75.9 175 33.7
Nitab4.5_0001290g0060 Nicotiana tabacum HOM05D004808 ORTHO05D005279 7.2e-12 75.5 181 32.0
Hund21986 Selenicereus undatus HOM05D004808 ORTHO05D005279 7.2e-12 75.5 181 32.6
Nitab4.5_0002310g0050 Nicotiana tabacum HOM05D004808 ORTHO05D005279 9.4e-12 75.1 181 30.9
PGSC0003DMG400031247 Solanum tuberosum HOM05D004808 ORTHO05D005279 1.2e-11 74.7 195 29.7
PSO339G5168 Papaver somniferum HOM05D004808 ORTHO05D005279 1.6e-11 74.3 209 30.6
GSVIVG01037260001 Vitis vinifera HOM05D004808 ORTHO05D005279 1.6e-11 74.3 195 32.8
EL10Ac4g10133 Beta vulgaris HOM05D004808 ORTHO05D005279 2.1e-11 73.9 175 33.1
CAN.G575.98 Capsicum annuum HOM05D004808 ORTHO05D005279 2.1e-11 73.9 182 30.8
Sabra16G0170900 Salix brachista HOM05D004808 ORTHO05D005279 2.1e-11 73.9 189 30.7
Medtr3g045830 Medicago truncatula HOM05D004808 ORTHO05D005279 2.7e-11 73.6 190 32.1
Potri.009G071700 Populus trichocarpa HOM05D004808 ORTHO05D005279 2.7e-11 73.6 180 28.9
Eucgr.J00701 Eucalyptus grandis HOM05D004808 ORTHO05D005279 3.6e-11 73.2 188 33.5
MD11G1186500 Malus domestica HOM05D004808 ORTHO05D005279 3.6e-11 73.2 214 29.4
MD03G1167600 Malus domestica HOM05D004808 ORTHO05D005279 4.7e-11 72.8 214 29.4
Cc02_g33420 Coffea canephora HOM05D004808 ORTHO05D005279 6.1e-11 72.4 185 33.5
Glyma.08G301700 Glycine max HOM05D004808 ORTHO05D005279 7.9e-11 72.0 220 30.0
Duzib150G0464 Durio zibethinus HOM05D004808 ORTHO05D005279 1.0e-10 71.6 179 29.6
Nitab4.5_0004018g0080 Nicotiana tabacum HOM05D004808 ORTHO05D005279 1.0e-10 71.6 170 31.2
Sed0021712 Sechium edule HOM05D004808 ORTHO05D005279 1.0e-10 71.6 183 31.7
PSO384G3775 Papaver somniferum HOM05D004808 ORTHO05D005279 1.4e-10 71.2 208 30.3
EL10Ac4g10128 Beta vulgaris HOM05D004808 ORTHO05D005279 1.8e-10 70.9 175 32.0
COL.COLO4_05197 Corchorus olitorius HOM05D004808 ORTHO05D005279 1.8e-10 70.9 179 29.6
Gohir.A07G120700 Gossypium hirsutum HOM05D004808 ORTHO05D005279 2.3e-10 70.5 180 30.6
Migut.N02368 Erythranthe guttata HOM05D004808 ORTHO05D005279 3.0e-10 70.1 202 31.7
Hma1.2p1_0382F.1_g140110 Hydrangea macrophylla HOM05D004808 ORTHO05D005279 3.0e-10 70.1 191 33.0
THA.LOC104806525 Tarenaya hassleriana HOM05D004808 ORTHO05D005279 3.0e-10 70.1 179 30.2
Gohir.A13G219300 Gossypium hirsutum HOM05D004808 ORTHO05D005279 5.1e-10 69.3 182 28.6
Gohir.D13G223000 Gossypium hirsutum HOM05D004808 ORTHO05D005279 5.1e-10 69.3 182 28.6
Gorai.013G254100 Gossypium raimondii HOM05D004808 ORTHO05D005279 5.1e-10 69.3 182 28.6
vmacro04022 Vaccinium macrocarpon HOM05D004808 ORTHO05D005279 6.7e-10 68.9 197 31.5
ATR0745G080 Amborella trichopoda HOM05D004808 ORTHO05D005279 8.8e-10 68.6 196 31.6
Solyc11g065110.2 Solanum lycopersicum HOM05D004808 ORTHO05D005279 8.8e-10 68.6 181 30.4
Nitab4.5_0002726g0010 Nicotiana tabacum HOM05D004808 ORTHO05D007773 1.1e-09 68.2 176 30.1
Ah.06g194480 Amaranthus hybridus HOM05D000189 ORTHO05D000474 2.6e-09 67.0 186 31.2
Sopen11g024850 Solanum pennellii HOM05D004808 ORTHO05D005279 2.6e-09 67.0 181 30.4
MSTRG.12447 Avicennia marina HOM05D004808 ORTHO05D005279 3.3e-09 66.6 214 28.0
Sabra09G0054000 Salix brachista HOM05D004808 ORTHO05D005279 4.4e-09 66.2 187 26.7
DCAR_023844 Daucus carota HOM05D004808 ORTHO05D000168 7.4e-09 65.5 187 27.8
VMungo0540G2372 Vigna mungo HOM05D004808 ORTHO05D005279 9.7e-09 65.1 218 27.1
Rhsim13G0211200 Rhododendron simsii HOM05D004808 ORTHO05D005279 1.3e-08 64.7 181 32.6
ECA238G3426 Erigeron canadensis HOM05D004808 ORTHO05D005279 2.2e-08 63.9 201 30.8
Phvul.006G030100 Phaseolus vulgaris HOM05D004808 ORTHO05D005279 2.8e-08 63.5 190 29.5
SEGI_16610 Sequoiadendron giganteum HOM05D001439 ORTHO05D017116 3.7e-08 63.2 168 35.1
MSTRG.18457 Avicennia marina HOM05D004808 ORTHO05D005279 4.8e-08 62.8 172 29.1
Actinidia23987 Actinidia chinensis HOM05D004808 ORTHO05D005279 6.3e-08 62.4 178 31.5
Gohir.D08G020100 Gossypium hirsutum HOM05D004808 ORTHO05D005279 6.3e-08 62.4 187 29.9
Gorai.004G014700 Gossypium raimondii HOM05D004808 ORTHO05D005279 8.2e-08 62.0 187 29.9
HanXRQChr14g0432391 Helianthus annuus HOM05D004808 ORTHO05D005279 8.2e-08 62.0 210 28.6
Gohir.A08G010000 Gossypium hirsutum HOM05D004808 ORTHO05D005279 1.1e-07 61.6 187 33.2
SEGI_26148 Sequoiadendron giganteum HOM05D004808 ORTHO05D005279 1.1e-07 61.6 183 29.0
Gohir.D07G125000 Gossypium hirsutum HOM05D004808 ORTHO05D005279 1.4e-07 61.2 174 29.9
Gorai.001G134800 Gossypium raimondii HOM05D004808 ORTHO05D005279 2.4e-07 60.5 174 29.9
Thhalv10028592m.g Eutrema salsugineum HOM05D004808 ORTHO05D005279 3.1e-07 60.1 49 55.1
Sp6g03290 Schrenkiella parvula HOM05D004808 ORTHO05D005279 3.1e-07 60.1 36 69.4
Duzib168G1750 Durio zibethinus HOM05D004808 ORTHO05D005279 4.1e-07 59.7 177 26.0
Migut.D00653 Erythranthe guttata HOM05D004808 ORTHO05D005279 9.1e-07 58.5 102 36.3
BraA09t35902Z Brassica rapa HOM05D004808 ORTHO05D005279 1.2e-06 58.2 105 36.2
Lj1A288G35 Lonicera japonica HOM05D004808 ORTHO05D005279 1.5e-06 57.8 179 29.1
BcaB01g01963 Brassica carinata HOM05D004808 ORTHO05D005279 2.0e-06 57.4 36 66.7
A09p02560 Brassica napus HOM05D004808 ORTHO05D005279 2.0e-06 57.4 94 39.4
C09p02620 Brassica napus HOM05D004808 ORTHO05D005279 2.6e-06 57.0 105 35.2
BolC9t53190H Brassica oleracea HOM05D004808 ORTHO05D005279 2.6e-06 57.0 105 35.2
Solyc12g099760.2 Solanum lycopersicum HOM05D004808 ORTHO05D005279 2.6e-06 57.0 179 27.9
Lsat_1_v5_gn_2_33621 Lactuca sativa HOM05D004808 ORTHO05D005279 3.4e-06 56.6 194 26.3
Sopen12g034390 Solanum pennellii HOM05D004808 ORTHO05D005279 3.4e-06 56.6 179 27.9
PGSC0003DMG400004714 Solanum tuberosum HOM05D004808 ORTHO05D005279 3.4e-06 56.6 182 26.9
SGA_v2.0_scaffold496G52466 Striga asiatica HOM05D004808 ORTHO05D005279 4.5e-06 56.2 164 27.4
THA.LOC104801160 Tarenaya hassleriana HOM05D001439 ORTHO05D002726 5.9e-06 55.8 56 48.2
Lj1A295G40 Lonicera japonica HOM05D004808 ORTHO05D005279 7.7e-06 55.5 179 29.6


User provided reference genes

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