Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 2.8e-100 368.6 190 100.0
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 2.2e-36 156.4 188 49.5
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 6.5e-36 154.8 195 46.7
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 3.2e-35 152.5 188 47.3
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.2e-34 150.6 194 47.9
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 6.0e-34 148.3 180 45.6
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.0e-34 148.3 194 47.4
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.3e-33 147.1 182 47.3
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.3e-33 147.1 188 46.3
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.9e-33 145.6 181 49.2
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 6.7e-33 144.8 183 47.0
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 8.7e-33 144.4 189 45.0
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.5e-32 143.7 187 46.0
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 1.5e-32 143.7 195 45.6
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 2.5e-32 142.9 185 45.9
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 3.3e-32 142.5 186 46.8
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 3.3e-32 142.5 201 42.3
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 9.6e-32 141.0 182 41.8
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 9.6e-32 141.0 193 46.1
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.3e-31 140.6 193 40.9
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.3e-31 140.6 193 45.6
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 2.1e-31 139.8 181 45.9
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.1e-31 139.8 195 44.6
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 3.7e-31 139.0 187 41.7
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 6.3e-31 138.3 193 42.5
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 6.3e-31 138.3 139 51.1
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 1.1e-30 137.5 181 44.2
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.1e-30 137.5 187 43.3
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.1e-30 137.5 187 42.2
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 1.4e-30 137.1 186 42.5
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.8e-30 136.7 185 44.3
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 2.4e-30 136.3 181 44.8
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 2.4e-30 136.3 192 44.3
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.4e-30 136.3 181 44.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 2.4e-30 136.3 181 44.2
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 2.4e-30 136.3 192 44.3
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 3.1e-30 136.0 185 42.2
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 3.1e-30 136.0 181 42.5
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 4.1e-30 135.6 193 42.0
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 9.0e-30 134.4 197 41.6
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 9.0e-30 134.4 182 45.6
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 9.0e-30 134.4 202 42.1
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 9.0e-30 134.4 188 43.6
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 2.0e-29 133.3 193 39.4
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 2.6e-29 132.9 183 42.6
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 2.6e-29 132.9 187 42.2
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 3.4e-29 132.5 194 41.2
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 4.5e-29 132.1 180 42.2
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 5.9e-29 131.7 181 42.0
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 5.9e-29 131.7 182 44.0
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 5.9e-29 131.7 187 43.3
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 5.9e-29 131.7 192 41.1
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 5.9e-29 131.7 182 42.3
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 5.9e-29 131.7 193 40.9
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.0e-28 131.0 188 43.6
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.3e-28 130.6 193 42.0
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.3e-28 130.6 183 41.5
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 1.3e-28 130.6 187 39.0
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.3e-28 130.6 185 43.2
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 1.3e-28 130.6 181 40.9
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.3e-28 130.6 181 40.9
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 1.3e-28 130.6 187 40.6
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 1.7e-28 130.2 184 41.3
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 2.2e-28 129.8 184 42.9
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 2.9e-28 129.4 196 41.8
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.9e-28 129.4 194 43.3
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 3.8e-28 129.0 180 41.7
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 3.8e-28 129.0 116 54.3
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 5.0e-28 128.6 180 42.2
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 5.0e-28 128.6 193 38.9
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 6.5e-28 128.3 180 39.4
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 6.5e-28 128.3 184 41.8
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 8.4e-28 127.9 192 40.6
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-27 127.5 189 41.8
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.1e-27 127.5 182 41.2
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.4e-27 127.1 184 41.8
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 1.9e-27 126.7 196 42.3
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.5e-27 126.3 187 40.6
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 4.2e-27 125.6 184 40.2
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 7.2e-27 124.8 183 41.0
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 7.2e-27 124.8 184 40.2
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 7.2e-27 124.8 188 39.9
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 7.2e-27 124.8 180 38.3
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 9.3e-27 124.4 184 40.2
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 2.1e-26 123.2 187 39.6
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 2.1e-26 123.2 187 39.6
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 2.1e-26 123.2 187 39.6
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 2.1e-26 123.2 183 40.4
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 2.1e-26 123.2 184 40.2
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 2.7e-26 122.9 182 40.1
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 2.7e-26 122.9 182 40.1
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 2.7e-26 122.9 193 40.4
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.3e-25 120.6 124 50.8
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.8e-25 120.2 187 39.0
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 1.8e-25 120.2 181 39.2
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.8e-25 120.2 183 39.9
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 2.3e-25 119.8 125 48.8
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.3e-25 119.8 118 46.6
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.9e-25 119.0 116 50.9
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 9.7e-24 114.4 121 50.4
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.2e-23 113.2 110 46.4
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.1e-22 110.9 171 41.5
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.8e-22 110.2 171 40.9
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 2.4e-22 109.8 108 49.1
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 4.1e-22 109.0 115 48.7
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.1e-22 109.0 231 33.8
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 9.0e-22 107.8 176 38.1
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.5e-21 107.1 123 40.7
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 2.0e-21 106.7 193 36.3
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.9e-19 100.1 158 35.4
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.0e-17 94.4 175 33.1
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 3.3e-16 89.4 89 44.9
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.7e-16 88.6 86 51.2
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 1.7e-15 87.0 143 33.6
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.4e-14 84.0 86 45.3
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 1.5e-13 80.5 75 52.0
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.7e-12 77.0 185 34.1
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.6e-10 70.5 117 41.0
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.6e-10 70.5 66 48.5
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 2.1e-10 70.1 123 30.1
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.8e-09 67.0 110 38.2
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 3.0e-09 66.2 102 43.1
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 6.3e-07 58.5 101 36.6
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 8.2e-07 58.2 96 45.8


User provided reference genes

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