Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25444 Sequoiadendron giganteum HOM05D005884 ORTHO05D007282 3.1e-85 318.5 177 100.0
CDE02G3372 Ceratophyllum demersum HOM05D005884 ORTHO05D007282 6.9e-24 114.8 135 56.3
Sopen09g024260 Solanum pennellii HOM05D005884 ORTHO05D007282 2.2e-22 109.8 130 53.1
CAN.G122.4 Capsicum annuum HOM05D005884 ORTHO05D007282 2.9e-22 109.4 84 67.9
HanXRQChr01g0014641 Helianthus annuus HOM05D005884 ORTHO05D007282 2.9e-22 109.4 129 52.7
GSVIVG01028583001 Vitis vinifera HOM05D005884 ORTHO05D007282 2.9e-22 109.4 80 72.5
Solyc09g061440.4 Solanum lycopersicum HOM05D005884 ORTHO05D007282 3.8e-22 109.0 130 52.3
Thecc.01G227600 Theobroma cacao HOM05D005884 ORTHO05D007282 6.5e-22 108.2 119 53.8
ECA248G2691 Erigeron canadensis HOM05D005884 ORTHO05D007282 8.4e-22 107.8 99 62.6
ATR0736G055 Amborella trichopoda HOM05D005884 ORTHO05D007282 1.4e-21 107.1 120 53.3
Dinv04661 Davidia involucrata HOM05D005884 ORTHO05D007282 4.2e-21 105.5 103 61.2
Eucgr.H00802 Eucalyptus grandis HOM05D005884 ORTHO05D007282 5.5e-21 105.1 109 56.0
PGSC0003DMG400028009 Solanum tuberosum HOM05D005884 ORTHO05D007282 5.5e-21 105.1 98 60.2
Potri.002G241000 Populus trichocarpa HOM05D005884 ORTHO05D007282 7.1e-21 104.8 124 52.4
Cc03_g12390 Coffea canephora HOM05D005884 ORTHO05D007282 9.3e-21 104.4 98 60.2
Psat7g243200 Pisum sativum HOM05D005884 ORTHO05D007282 9.3e-21 104.4 150 47.3
TAR362G0919 Trochodendron aralioides HOM05D005884 ORTHO05D007282 1.2e-20 104.0 160 44.4
Ca_20129_v3 Cicer arietinum L. HOM05D005884 ORTHO05D007282 1.6e-20 103.6 108 57.4
Nitab4.5_0003790g0020 Nicotiana tabacum HOM05D005884 ORTHO05D007282 1.6e-20 103.6 157 45.2
CSS0032503 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 2.1e-20 103.2 74 71.6
FAN15G1595 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.1e-20 103.2 74 74.3
FAN27G0062 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.1e-20 103.2 74 74.3
EL10Ac7g17785 Beta vulgaris HOM05D005884 ORTHO05D007282 2.7e-20 102.8 78 69.2
FAN15G1921 Fragaria x ananassa HOM05D005884 ORTHO05D007282 2.7e-20 102.8 74 73.0
Actinidia23729 Actinidia chinensis HOM05D005884 ORTHO05D007282 3.5e-20 102.4 111 56.8
Nitab4.5_0000866g0050 Nicotiana tabacum HOM05D005884 ORTHO05D007282 3.5e-20 102.4 124 51.6
Sc05g0002430 Simmondsia chinensis HOM05D005884 ORTHO05D007282 3.5e-20 102.4 159 44.0
FvH4_2g19250 Fragaria vesca HOM05D005884 ORTHO05D007282 4.6e-20 102.1 74 74.3
FAN24G3425 Fragaria x ananassa HOM05D005884 ORTHO05D007282 4.6e-20 102.1 74 74.3
vmacro14762 Vaccinium macrocarpon HOM05D005884 ORTHO05D007282 4.6e-20 102.1 74 70.3
CSS0024949 Camellia sinensis var. sinensis HOM05D005884 ORTHO05D007282 6.0e-20 101.7 74 70.3
Peaxi162Scf00107g01314 Petunia axillaris HOM05D005884 ORTHO05D007282 6.0e-20 101.7 85 64.7
MSTRG.18383 Avicennia marina HOM05D005884 ORTHO05D007282 7.9e-20 101.3 113 51.3
TAR633G1722 Trochodendron aralioides HOM05D005884 ORTHO05D007282 7.9e-20 101.3 173 43.4
COL.COLO4_10043 Corchorus olitorius HOM05D003123 ORTHO05D007282 1.0e-19 100.9 71 74.6
Gohir.A07G156200 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.0e-19 100.9 74 70.3
Rhsim01G0257200 Rhododendron simsii HOM05D005884 ORTHO05D007282 1.3e-19 100.5 121 52.1
HPP92_022492 Vanilla planifolia HOM05D005884 ORTHO05D007282 1.3e-19 100.5 84 60.7
Migut.D00525 Erythranthe guttata HOM05D005884 ORTHO05D007282 1.8e-19 100.1 101 57.4
Gohir.D07G162500 Gossypium hirsutum HOM05D005884 ORTHO05D007282 1.8e-19 100.1 85 65.9
Gorai.001G186100 Gossypium raimondii HOM05D005884 ORTHO05D007282 1.8e-19 100.1 85 65.9
TWI36G0226 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 1.8e-19 100.1 71 73.2
Ciclev10022209m.g Citrus clementina HOM05D005884 ORTHO05D007282 2.3e-19 99.8 120 52.5
Aqoxy2G03761 Aquilegia oxysepala HOM05D005884 ORTHO05D007282 3.0e-19 99.4 118 50.8
Glyma.18G149300 Glycine max HOM05D005884 ORTHO05D007282 3.0e-19 99.4 103 60.2
QL02p021928 Quercus lobata HOM05D005884 ORTHO05D007282 3.0e-19 99.4 94 62.8
Lj2A1133T33 Lonicera japonica HOM05D005884 ORTHO05D007282 3.9e-19 99.0 83 67.5
Duzib133G0404 Durio zibethinus HOM05D005884 ORTHO05D007282 5.1e-19 98.6 74 70.3
Lj3g0000124 Lotus japonicus HOM05D005884 ORTHO05D007282 5.1e-19 98.6 130 50.8
Phvul.010G014200 Phaseolus vulgaris HOM05D005884 ORTHO05D007282 5.1e-19 98.6 86 64.0
AUR62031836 Chenopodium quinoa HOM05D005884 ORTHO05D007282 6.7e-19 98.2 116 50.0
Dinv19212 Davidia involucrata HOM05D005884 ORTHO05D007282 6.7e-19 98.2 95 60.0
Hma1.2p1_0351F.1_g132860 Hydrangea macrophylla HOM05D005884 ORTHO05D007282 6.7e-19 98.2 72 68.1
PGR044G0377 Punica granatum HOM05D005884 ORTHO05D007282 6.7e-19 98.2 74 67.6
RcHm_v2.0_Chr6g0285061 Rosa chinensis HOM05D005884 ORTHO05D007282 6.7e-19 98.2 71 71.8
arahy.Tifrunner.gnm1.ann1.Q3DN0U Arachis hypogaea HOM05D005884 ORTHO05D007282 8.7e-19 97.8 94 60.6
Oeu015899.1 Olea europaea HOM05D005884 ORTHO05D007282 8.7e-19 97.8 138 47.1
PSO017G2163 Papaver somniferum HOM05D005884 ORTHO05D007282 8.7e-19 97.8 97 59.8
Sabra02G0183600 Salix brachista HOM05D005884 ORTHO05D007282 8.7e-19 97.8 71 73.2
CiPaw.04G106200 Carya illinoinensis HOM05D005884 ORTHO05D007282 1.5e-18 97.1 97 59.8
Duzib138G0327 Durio zibethinus HOM05D005884 ORTHO05D007282 1.5e-18 97.1 83 65.1
arahy.Tifrunner.gnm1.ann1.C60K2U Arachis hypogaea HOM05D005884 ORTHO05D007282 1.9e-18 96.7 97 60.8
MD05G1177500 Malus domestica HOM05D005884 ORTHO05D007282 1.9e-18 96.7 84 63.1
Prupe.8G204400 Prunus persica HOM05D005884 ORTHO05D007282 2.5e-18 96.3 67 74.6
CiPaw.03G150900 Carya illinoinensis HOM05D005884 ORTHO05D007282 3.3e-18 95.9 115 53.0
Lsat_1_v5_gn_5_179880 Lactuca sativa HOM05D005884 ORTHO05D007282 4.3e-18 95.5 133 47.4
PSO063G4085 Papaver somniferum HOM05D005884 ORTHO05D007282 4.3e-18 95.5 97 58.8
Ah.08g213990 Amaranthus hybridus HOM05D005884 ORTHO05D007282 5.7e-18 95.1 137 46.7
Cpa.g.sc8.170 Carica papaya HOM05D005884 ORTHO05D007282 5.7e-18 95.1 125 46.4
SalBow4G1286 Salvia bowleyana HOM05D005884 ORTHO05D007282 5.7e-18 95.1 101 54.5
AUR62008873 Chenopodium quinoa HOM05D005884 ORTHO05D007282 7.4e-18 94.7 131 48.1
MELO3C012764.2 Cucumis melo HOM05D005884 ORTHO05D007282 9.6e-18 94.4 132 46.2
Glyma.03G080200 Glycine max HOM05D005884 ORTHO05D007282 9.6e-18 94.4 175 44.6
Lalb_Chr07g0194041 Lupinus albus HOM05D005884 ORTHO05D007282 1.3e-17 94.0 136 47.8
CsaV3_7G025830 Cucumis sativus L. HOM05D005884 ORTHO05D007282 1.6e-17 93.6 150 43.3
Medtr4g017880 Medicago truncatula HOM05D005884 ORTHO05D007282 2.1e-17 93.2 147 49.7
Hund18350 Selenicereus undatus HOM05D005884 ORTHO05D007282 2.1e-17 93.2 118 49.2
SGA_v2.0_scaffold8G04650 Striga asiatica HOM05D005884 ORTHO05D007282 2.1e-17 93.2 80 61.2
TWI18G1166 Tripterygium wilfordii HOM05D005884 ORTHO05D007282 2.1e-17 93.2 74 66.2
DCAR_018555 Daucus carota HOM05D005884 ORTHO05D007282 3.7e-17 92.4 123 50.4
ClCG09G009110 Citrullus lanatus HOM05D005884 ORTHO05D007282 6.2e-17 91.7 132 47.0
Migut.N02263 Erythranthe guttata HOM05D005884 ORTHO05D007282 6.2e-17 91.7 81 59.3
MBI07_g23671_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 6.2e-17 91.7 110 50.9
Cfa002560 Carpinus fangiana HOM05D005884 ORTHO05D007282 1.1e-16 90.9 75 66.7
Haze_24787 Corylus avellana HOM05D005884 ORTHO05D007282 1.1e-16 90.9 75 66.7
Mapoly0028s0026 Marchantia polymorpha HOM05D005884 ORTHO05D007282 1.1e-16 90.9 127 45.7
Sed0001531 Sechium edule HOM05D005884 ORTHO05D007282 1.1e-16 90.9 160 42.5
Manes.12G041200 Manihot esculenta HOM05D005884 ORTHO05D007282 1.8e-16 90.1 74 62.2
Manes.13G044700 Manihot esculenta HOM05D005884 ORTHO05D007282 1.8e-16 90.1 109 49.5
unitig_22.g6325 Utricularia gibba HOM05D005884 ORTHO05D007282 1.8e-16 90.1 133 43.6
Os04g0513000 Oryza sativa ssp. japonica HOM05D005884 ORTHO05D007282 3.1e-16 89.4 89 53.9
Gorai.009G365800 Gossypium raimondii HOM05D005884 ORTHO05D007282 5.3e-16 88.6 82 62.2
Nn1g07794 Nelumbo nucifera HOM05D005884 ORTHO05D007282 6.9e-16 88.2 120 46.7
Zm00001eb426500 Zea mays HOM05D005884 ORTHO05D007282 6.9e-16 88.2 136 44.9
Carub.0007s2947 Capsella rubella HOM05D005884 ORTHO05D007282 1.5e-15 87.0 117 46.2
BcaB03g16138 Brassica carinata HOM05D005884 ORTHO05D007282 4.5e-15 85.5 75 60.0
TPR.G8219 Trifolium pratense HOM05D005884 ORTHO05D007282 1.3e-14 84.0 164 40.2
MBI10_g44186_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 2.9e-14 82.8 83 54.2
Gohir.A09G200610 Gossypium hirsutum HOM05D005884 ORTHO05D007282 3.8e-14 82.4 71 66.2
A04p08870 Brassica napus HOM05D005884 ORTHO05D007282 8.4e-14 81.3 64 65.6
BraA04t16580Z Brassica rapa HOM05D005884 ORTHO05D007282 8.4e-14 81.3 64 65.6
Sp7g10660 Schrenkiella parvula HOM05D005884 ORTHO05D007282 8.4e-14 81.3 110 46.4
BcaC02g09439 Brassica carinata HOM05D005884 ORTHO05D007282 1.1e-13 80.9 64 65.6
BolC4t25837H Brassica oleracea HOM05D005884 ORTHO05D007282 1.1e-13 80.9 64 65.6
Thhalv10026263m.g Eutrema salsugineum HOM05D005884 ORTHO05D007282 1.4e-13 80.5 83 51.8
AagrBONN_evm.TU.Sc2ySwM_228.3174 Anthoceros agrestis HOM05D005884 ORTHO05D007282 7.2e-13 78.2 52 73.1
MBI06_g14323_MAGBIO Magnolia biondii HOM05D005884 ORTHO05D007282 1.2e-12 77.4 73 56.2
MSTRG.17548 Avicennia marina HOM05D005884 ORTHO05D007282 2.1e-12 76.6 106 49.1
VMungo0331G1358 Vigna mungo HOM05D005884 ORTHO05D007282 2.1e-12 76.6 110 45.5
TAR194G0001 Trochodendron aralioides HOM05D005884 ORTHO05D004773 2.7e-12 76.3 93 54.8
MD10G1165900 Malus domestica HOM05D005884 ORTHO05D007282 7.9e-12 74.7 55 67.3
C04p42740 Brassica napus HOM05D005884 ORTHO05D007282 2.3e-11 73.2 64 60.9
SalBow2G0198 Salvia bowleyana HOM05D005884 ORTHO05D007282 6.7e-11 71.6 80 46.2
THA.LOC104804605 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 1.5e-10 70.5 71 52.1
CARHR218670 Cardamine hirsuta HOM05D005884 ORTHO05D007282 3.3e-10 69.3 124 37.1
THA.LOC104808781 Tarenaya hassleriana HOM05D005884 ORTHO05D007282 3.3e-10 69.3 60 61.7
Pp3c5_25810 Physcomitrium patens HOM05D005884 ORTHO05D007282 4.8e-09 65.5 95 41.1
MCO02G464 Micromonas commoda HOM05D005884 ORTHO05D007282 1.8e-08 63.5 73 49.3
AT4G13200 Arabidopsis thaliana HOM05D005884 ORTHO05D007282 5.3e-08 62.0 84 44.0
Atru.chr3.3178 Acer truncatum HOM05D005884 ORTHO05D007282 1.2e-07 60.8 46 63.0
CANSAT01G0442 Cannabis sativa HOM05D005884 ORTHO05D007282 1.5e-07 60.5 110 39.1
Sed0008993 Sechium edule HOM05D005884 ORTHO05D007282 2.6e-07 59.7 94 45.7
Gohir.A03G143925 Gossypium hirsutum HOM05D005884 ORTHO05D007282 2.9e-06 56.2 53 64.2
Gorai.001G128300 Gossypium raimondii HOM05D005884 ORTHO05D007282 2.9e-06 56.2 53 64.2
AL9U10790 Arabidopsis lyrata HOM05D005884 ORTHO05D007282 3.8e-06 55.8 157 33.1
Gorai.001G116800 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.8e-06 55.8 51 66.7
Gorai.002G226800 Gossypium raimondii HOM05D005884 ORTHO05D007282 3.8e-06 55.8 51 66.7
PRCOL_00003747 Prasinoderma coloniale HOM05D005884 ORTHO05D007282 8.5e-06 54.7 51 52.9


User provided reference genes

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