Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25376 Sequoiadendron giganteum HOM05D007869 ORTHO05D009962 9.9e-94 346.7 163 100.0
CARHR001570 Cardamine hirsuta HOM05D007869 ORTHO05D009962 1.5e-17 93.6 135 41.5
Cpa.g.sc57.67 Carica papaya HOM05D007869 ORTHO05D009962 2.6e-17 92.8 135 43.7
Carub.0001s0129 Capsella rubella HOM05D007869 ORTHO05D009962 7.5e-17 91.3 135 42.2
Thhalv10009953m.g Eutrema salsugineum HOM05D007869 ORTHO05D009962 7.5e-17 91.3 154 38.3
Sp1g01350 Schrenkiella parvula HOM05D007869 ORTHO05D009962 1.7e-16 90.1 155 39.4
AL4G39680 Arabidopsis lyrata HOM05D007869 ORTHO05D009962 2.2e-16 89.7 135 43.0
MBI04_g27772_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 2.9e-16 89.4 141 37.6
MBI04_g38990_MAGBIO Magnolia biondii HOM05D007869 ORTHO05D009962 2.9e-16 89.4 141 37.6
THA.LOC104825914 Tarenaya hassleriana HOM05D007869 ORTHO05D009962 2.9e-16 89.4 135 44.4
Aa31LG1G10230 Aethionema arabicum HOM05D007869 ORTHO05D009962 3.7e-16 89.0 135 39.3
CANSAT56G0171 Cannabis sativa HOM05D007869 ORTHO05D009962 4.9e-16 88.6 112 46.4
Medtr1g038260 Medicago truncatula HOM05D007869 ORTHO05D009962 6.4e-16 88.2 112 39.3
Atru.chr5.803 Acer truncatum HOM05D007869 ORTHO05D009962 8.3e-16 87.8 145 39.3
AUR62023523 Chenopodium quinoa HOM05D007869 ORTHO05D009962 8.3e-16 87.8 133 36.1
AUR62004577 Chenopodium quinoa HOM05D007869 ORTHO05D009962 1.1e-15 87.4 130 36.9
Haze_15765 Corylus avellana HOM05D007869 ORTHO05D009962 1.4e-15 87.0 150 40.0
Cfa003717 Carpinus fangiana HOM05D007869 ORTHO05D009962 2.4e-15 86.3 150 40.0
Ah.05g178800 Amaranthus hybridus HOM05D007869 ORTHO05D009962 4.1e-15 85.5 137 38.0
Duzib138G0629 Durio zibethinus HOM05D007869 ORTHO05D009962 4.1e-15 85.5 149 39.6
CsaV3_6G008420 Cucumis sativus L. HOM05D007869 ORTHO05D009962 5.4e-15 85.1 106 43.4
Thecc.01G330400 Theobroma cacao HOM05D007869 ORTHO05D009962 5.4e-15 85.1 138 42.0
TWI14G0946 Tripterygium wilfordii HOM05D007869 ORTHO05D009962 7.0e-15 84.7 137 35.0
AT2G41610 Arabidopsis thaliana HOM05D007869 ORTHO05D009962 1.2e-14 84.0 138 40.6
Zm00001eb398460 Zea mays HOM05D007869 ORTHO05D009962 1.2e-14 84.0 107 45.8
Medtr1g038290 Medicago truncatula HOM05D007869 ORTHO05D009962 2.7e-14 82.8 112 37.5
Os03g0253600 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 3.5e-14 82.4 107 44.9
Psat6g099760 Pisum sativum HOM05D007869 ORTHO05D009962 3.5e-14 82.4 107 40.2
TPR.G29782 Trifolium pratense HOM05D007869 ORTHO05D009962 3.5e-14 82.4 111 36.9
BolC5t28887H Brassica oleracea HOM05D007869 ORTHO05D009962 4.6e-14 82.0 155 36.8
Nn3g18755 Nelumbo nucifera HOM05D007869 ORTHO05D009962 4.6e-14 82.0 157 35.0
A10p01030 Brassica napus HOM05D007869 ORTHO05D009962 6.0e-14 81.6 135 39.3
BraA10t42381Z Brassica rapa HOM05D007869 ORTHO05D009962 6.0e-14 81.6 155 37.4
CiPaw.02G045900 Carya illinoinensis HOM05D007869 ORTHO05D009962 6.0e-14 81.6 150 37.3
RcHm_v2.0_Chr1g0361741 Rosa chinensis HOM05D007869 ORTHO05D009962 6.0e-14 81.6 112 42.0
FAN03G1443 Fragaria x ananassa HOM05D007869 ORTHO05D009962 7.8e-14 81.3 112 42.9
FAN03G2169 Fragaria x ananassa HOM05D007869 ORTHO05D009962 7.8e-14 81.3 112 42.9
FAN06G3475 Fragaria x ananassa HOM05D007869 ORTHO05D009962 7.8e-14 81.3 112 42.9
EL10Ac1g00161 Beta vulgaris HOM05D007869 ORTHO05D009962 1.0e-13 80.9 133 34.6
FvH4_7g18090 Fragaria vesca HOM05D007869 ORTHO05D009962 1.0e-13 80.9 112 42.9
FAN06G2096 Fragaria x ananassa HOM05D007869 ORTHO05D009962 1.0e-13 80.9 112 42.9
FAN10G0101 Fragaria x ananassa HOM05D007869 ORTHO05D009962 1.0e-13 80.9 112 42.9
Manes.05G005500 Manihot esculenta HOM05D007869 ORTHO05D009962 1.0e-13 80.9 149 34.9
BcaC05g24607 Brassica carinata HOM05D007869 ORTHO05D009962 1.3e-13 80.5 153 34.6
C05p01060 Brassica napus HOM05D007869 ORTHO05D009962 1.3e-13 80.5 153 34.6
Lj2g0022280 Lotus japonicus HOM05D007869 ORTHO05D009962 1.7e-13 80.1 112 41.1
TAR374G1227 Trochodendron aralioides HOM05D007869 ORTHO05D009962 1.7e-13 80.1 138 37.0
COL.COLO4_23074 Corchorus olitorius HOM05D007869 ORTHO05D009962 3.0e-13 79.3 146 37.7
Lalb_Chr04g0258981 Lupinus albus HOM05D007869 ORTHO05D009962 3.0e-13 79.3 113 43.4
Os10g0200700 Oryza sativa ssp. japonica HOM05D007869 ORTHO05D009962 3.0e-13 79.3 106 42.5
ClCG06G002380 Citrullus lanatus HOM05D007869 ORTHO05D009962 3.9e-13 79.0 106 41.5
Lalb_Chr17g0337801 Lupinus albus HOM05D007869 ORTHO05D009962 5.0e-13 78.6 149 37.6
Phvul.003G003700 Phaseolus vulgaris HOM05D007869 ORTHO05D009962 5.0e-13 78.6 112 42.0
Zm00001eb010960 Zea mays HOM05D007869 ORTHO05D009962 5.0e-13 78.6 107 43.9
Glyma.09G283900 Glycine max HOM05D007869 ORTHO05D009962 8.6e-13 77.8 112 40.2
Glyma.20G001800 Glycine max HOM05D007869 ORTHO05D009962 1.1e-12 77.4 112 39.3
VMungo0251G2255 Vigna mungo HOM05D007869 ORTHO05D009962 1.1e-12 77.4 112 39.3
arahy.Tifrunner.gnm1.ann1.WBP5Q2 Arachis hypogaea HOM05D007869 ORTHO05D009962 1.5e-12 77.0 111 40.5
Prupe.2G203300 Prunus persica HOM05D007869 ORTHO05D009962 1.5e-12 77.0 135 38.5
arahy.Tifrunner.gnm1.ann1.2P25JP Arachis hypogaea HOM05D007869 ORTHO05D009962 1.9e-12 76.6 111 40.5
Ciclev10021277m.g Citrus clementina HOM05D007869 ORTHO05D009962 2.5e-12 76.3 115 40.9
Sed0016589 Sechium edule HOM05D007869 ORTHO05D009962 3.3e-12 75.9 106 40.6
HPP92_007374 Vanilla planifolia HOM05D007869 ORTHO05D009962 4.3e-12 75.5 141 34.8
ATR0579G134 Amborella trichopoda HOM05D007869 ORTHO05D009962 5.6e-12 75.1 108 42.6
Sabra14G0079800 Salix brachista HOM05D007869 ORTHO05D009962 9.5e-12 74.3 69 52.2
FAN10G1242 Fragaria x ananassa HOM05D007869 ORTHO05D009962 2.1e-11 73.2 84 47.6
Potri.014G108300 Populus trichocarpa HOM05D007869 ORTHO05D009962 2.1e-11 73.2 69 50.7
FAN01G2503 Fragaria x ananassa HOM05D007869 ORTHO05D009962 3.6e-11 72.4 69 52.2
Sabra02G0132700 Salix brachista HOM05D007869 ORTHO05D009962 1.4e-10 70.5 111 39.6
Sc01g0002100 Simmondsia chinensis HOM05D007869 ORTHO05D009962 2.3e-10 69.7 142 35.2
FvH4_7g18120 Fragaria vesca HOM05D007869 ORTHO05D009962 3.1e-10 69.3 84 46.4
CSS0017560 Camellia sinensis var. sinensis HOM05D007869 ORTHO05D009962 1.5e-09 67.0 61 54.1
PSO384G3553 Papaver somniferum HOM05D007869 ORTHO05D009962 5.8e-09 65.1 69 49.3
Actinidia28076 Actinidia chinensis HOM05D007869 ORTHO05D009962 7.5e-09 64.7 60 53.3
PSO135G1025 Papaver somniferum HOM05D007869 ORTHO05D009962 9.8e-09 64.3 135 34.1
MELO3C022297.2 Cucumis melo HOM05D007869 ORTHO05D009962 3.2e-07 59.3 76 50.0
Lju170C22T1 Lonicera japonica HOM05D007869 ORTHO05D009962 2.7e-06 56.2 46 58.7


User provided reference genes

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