Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25339 Sequoiadendron giganteum HOM05D008250 ORTHO05D010361 9.3e-30 132.9 67 100.0
Atru.chr3.1053 Acer truncatum HOM05D008250 ORTHO05D010361 7.9e-13 76.6 53 71.7
GSVIVG01002948001 Vitis vinifera HOM05D008250 ORTHO05D010361 7.9e-13 76.6 49 77.6
GSVIVG01004436001 Vitis vinifera HOM05D008250 ORTHO05D010361 7.9e-13 76.6 49 77.6
Nn6g34516 Nelumbo nucifera HOM05D008250 ORTHO05D010361 2.3e-12 75.1 65 67.7
RcHm_v2.0_Chr2g0108561 Rosa chinensis HOM05D008250 ORTHO05D010361 2.3e-12 75.1 49 75.5
COL.COLO4_11607 Corchorus olitorius HOM05D008250 ORTHO05D010361 3.9e-12 74.3 50 72.0
Sc03g0002500 Simmondsia chinensis HOM05D008250 ORTHO05D010361 3.9e-12 74.3 53 71.7
Thecc.01G075500 Theobroma cacao HOM05D008250 ORTHO05D010361 5.1e-12 73.9 50 72.0
Gohir.D12G076400 Gossypium hirsutum HOM05D008250 ORTHO05D010361 6.7e-12 73.6 52 67.3
Gorai.008G085000 Gossypium raimondii HOM05D008250 ORTHO05D010361 6.7e-12 73.6 52 67.3
Hma1.2p1_1760F.1_g301220 Hydrangea macrophylla HOM05D008250 ORTHO05D010361 6.7e-12 73.6 46 78.3
TWI74G1530 Tripterygium wilfordii HOM05D008250 ORTHO05D010361 6.7e-12 73.6 49 75.5
Aqoxy6G02462 Aquilegia oxysepala HOM05D008250 ORTHO05D010361 8.7e-12 73.2 61 62.3
Gohir.A12G078200 Gossypium hirsutum HOM05D008250 ORTHO05D010361 8.7e-12 73.2 52 67.3
Ciclev10026916m.g Citrus clementina HOM05D008250 ORTHO05D010361 1.9e-11 72.0 46 76.1
HanXRQChr09g0255361 Helianthus annuus HOM05D008250 ORTHO05D010361 1.9e-11 72.0 46 73.9
Manes.12G117000 Manihot esculenta HOM05D008250 ORTHO05D010361 2.5e-11 71.6 49 71.4
Actinidia16414 Actinidia chinensis HOM05D008250 ORTHO05D010361 5.6e-11 70.5 49 67.3
MD02G1189100 Malus domestica HOM05D008250 ORTHO05D010361 5.6e-11 70.5 49 69.4
Potri.007G006700 Populus trichocarpa HOM05D008250 ORTHO05D010361 5.6e-11 70.5 49 69.4
Sed0009961 Sechium edule HOM05D008250 ORTHO05D010361 5.6e-11 70.5 52 61.5
Phvul.003G233500 Phaseolus vulgaris HOM05D008250 ORTHO05D010361 7.4e-11 70.1 52 65.4
Lsat_1_v5_gn_4_159680 Lactuca sativa HOM05D008250 ORTHO05D010361 1.3e-10 69.3 50 64.0
ClCG02G012200 Citrullus lanatus HOM05D008250 ORTHO05D010361 1.6e-10 68.9 52 61.5
Solyc02g092130.2 Solanum lycopersicum HOM05D008250 ORTHO05D010361 1.6e-10 68.9 49 69.4
BcaB02g09904 Brassica carinata HOM05D008250 ORTHO05D010361 2.1e-10 68.6 43 72.1
BcaC01g02825 Brassica carinata HOM05D008250 ORTHO05D010361 2.1e-10 68.6 43 72.1
BraA06t26203Z Brassica rapa HOM05D008250 ORTHO05D010361 2.1e-10 68.6 43 72.1
CiPaw.01G002500 Carya illinoinensis HOM05D008250 ORTHO05D010361 2.8e-10 68.2 52 61.5
Thhalv10005252m.g Eutrema salsugineum HOM05D008250 ORTHO05D010361 3.7e-10 67.8 43 69.8
Migut.H00327 Erythranthe guttata HOM05D008250 ORTHO05D010361 4.8e-10 67.4 41 73.2
PGSC0003DMG400021408 Solanum tuberosum HOM05D008250 ORTHO05D010361 4.8e-10 67.4 49 67.3
CDE02G1785 Ceratophyllum demersum HOM05D008250 ORTHO05D010361 6.2e-10 67.0 46 65.2
Carub.0008s2677 Capsella rubella HOM05D008250 ORTHO05D010361 8.2e-10 66.6 56 55.4
C03p59760 Brassica napus HOM05D008250 ORTHO05D010361 1.4e-09 65.9 43 69.8
C03p59770 Brassica napus HOM05D008250 ORTHO05D010361 1.4e-09 65.9 43 69.8
BolC3t18239H Brassica oleracea HOM05D008250 ORTHO05D010361 1.4e-09 65.9 43 69.8
BolC3t18240H Brassica oleracea HOM05D008250 ORTHO05D010361 1.4e-09 65.9 43 69.8
CARHR279880 Cardamine hirsuta HOM05D008250 ORTHO05D010361 1.8e-09 65.5 58 63.8
AT5G65880 Arabidopsis thaliana HOM05D008250 ORTHO05D010361 4.0e-09 64.3 57 56.1
AL8G43594 Arabidopsis lyrata HOM05D008250 ORTHO05D010361 6.9e-09 63.5 56 55.4
TPR.G3717 Trifolium pratense HOM05D008250 ORTHO05D010361 6.9e-09 63.5 35 77.1
Glyma.05G107700 Glycine max HOM05D008250 ORTHO05D010361 9.0e-09 63.2 35 77.1
Potri.014G006850 Populus trichocarpa HOM05D008250 ORTHO05D010361 1.2e-08 62.8 46 63.0
Prupe.6G217600 Prunus persica HOM05D008250 ORTHO05D010361 1.5e-08 62.4 49 65.3
CsaV3_2G016360 Cucumis sativus L. HOM05D008250 ORTHO05D010361 2.6e-08 61.6 40 70.0
Psat4g080920 Pisum sativum HOM05D008250 ORTHO05D010361 2.6e-08 61.6 33 78.8
Glyma.17G159100 Glycine max HOM05D008250 ORTHO05D010361 3.4e-08 61.2 33 78.8
Medtr4g097410 Medicago truncatula HOM05D008250 ORTHO05D010361 5.8e-08 60.5 33 75.8
Lalb_Chr05g0230301 Lupinus albus HOM05D008250 ORTHO05D010361 1.0e-07 59.7 52 57.7
Os03g0675700 Oryza sativa ssp. japonica HOM05D008250 ORTHO05D010361 1.0e-07 59.7 39 66.7
Lj4g0012638 Lotus japonicus HOM05D008250 ORTHO05D010361 1.7e-07 58.9 33 72.7
arahy.Tifrunner.gnm1.ann1.IKZ63P Arachis hypogaea HOM05D008250 ORTHO05D010361 3.8e-07 57.8 33 72.7
arahy.Tifrunner.gnm1.ann1.L5XXFX Arachis hypogaea HOM05D008250 ORTHO05D010361 3.8e-07 57.8 33 72.7
CSS0002791 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 9.3e-06 53.1 34 73.5
CSS0014718 Camellia sinensis var. sinensis HOM05D008250 ORTHO05D010361 9.3e-06 53.1 34 73.5


User provided reference genes

Program Settings