Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25328 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 2.0e-120 435.6 200 100.0
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.4e-44 183.7 96 78.1
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 2.0e-43 179.9 96 82.3
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 1.0e-39 167.5 96 76.0
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 3.8e-39 165.6 94 73.4
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 3.8e-39 165.6 98 73.5
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 6.6e-39 164.9 94 73.4
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 6.6e-39 164.9 94 72.3
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 8.6e-39 164.5 94 73.4
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 8.6e-39 164.5 94 73.4
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 8.6e-39 164.5 94 73.4
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.1e-38 164.1 93 73.1
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.5e-38 163.7 94 72.3
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 3.3e-38 162.5 94 71.3
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 3.3e-38 162.5 94 71.3
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 3.3e-38 162.5 94 71.3
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 3.3e-38 162.5 94 72.3
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 3.3e-38 162.5 94 70.2
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 3.3e-38 162.5 94 71.3
TAR629G1108 Trochodendron aralioides HOM05D005292 ORTHO05D006473 3.3e-38 162.5 94 71.3
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 7.3e-38 161.4 94 71.3
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 7.3e-38 161.4 94 71.3
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 7.3e-38 161.4 94 70.2
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 9.5e-38 161.0 94 71.3
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 9.5e-38 161.0 93 72.0
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 1.2e-37 160.6 94 71.3
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 1.2e-37 160.6 94 71.3
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 1.2e-37 160.6 94 70.2
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 1.2e-37 160.6 94 70.2
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 1.2e-37 160.6 94 69.1
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 1.2e-37 160.6 94 71.3
Aa31LG11G5120 Aethionema arabicum HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 69.1
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 70.2
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 70.2
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 70.2
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 70.2
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 71.3
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 70.2
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 1.6e-37 160.2 93 72.0
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 1.6e-37 160.2 94 70.2
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 2.1e-37 159.8 94 70.2
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 2.1e-37 159.8 94 70.2
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 2.8e-37 159.5 94 70.2
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 2.8e-37 159.5 94 70.2
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 2.8e-37 159.5 94 70.2
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 3.6e-37 159.1 94 71.3
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 3.6e-37 159.1 94 68.1
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 3.6e-37 159.1 94 71.3
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 3.6e-37 159.1 94 70.2
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 3.6e-37 159.1 94 70.2
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 70.2
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 70.2
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 70.2
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 70.2
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 69.1
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 70.2
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 69.1
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 4.7e-37 158.7 94 70.2
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 6.1e-37 158.3 94 71.3
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 6.1e-37 158.3 94 69.1
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 8.0e-37 157.9 94 69.1
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 8.0e-37 157.9 93 67.7
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 8.0e-37 157.9 94 68.1
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 8.0e-37 157.9 94 69.1
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 8.0e-37 157.9 96 67.7
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 8.0e-37 157.9 96 67.7
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 8.0e-37 157.9 96 67.7
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 8.0e-37 157.9 94 70.2
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 1.0e-36 157.5 94 68.1
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 1.0e-36 157.5 94 71.3
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.0e-36 157.5 94 70.2
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.0e-36 157.5 94 70.2
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 1.0e-36 157.5 94 70.2
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 1.0e-36 157.5 94 70.2
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 1.0e-36 157.5 93 69.9
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 1.4e-36 157.1 94 67.0
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 1.4e-36 157.1 93 69.9
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 1.4e-36 157.1 94 69.1
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 1.4e-36 157.1 94 69.1
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 1.8e-36 156.8 94 69.1
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 1.8e-36 156.8 94 68.1
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 1.8e-36 156.8 93 73.1
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 2.3e-36 156.4 94 70.2
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 2.3e-36 156.4 94 68.1
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 2.3e-36 156.4 94 68.1
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 3.0e-36 156.0 94 67.0
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 3.0e-36 156.0 94 67.0
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 3.0e-36 156.0 94 70.2
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 3.0e-36 156.0 95 67.4
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 66.0
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 68.1
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 69.1
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 69.1
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 69.1
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 69.1
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 69.1
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 4.0e-36 155.6 94 68.1
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 5.2e-36 155.2 94 67.0
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 6.8e-36 154.8 94 69.1
Sabra03G0079600 Salix brachista HOM05D005292 ORTHO05D006473 6.8e-36 154.8 94 68.1
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 6.8e-36 154.8 92 68.5
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 8.9e-36 154.5 94 66.0
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 8.9e-36 154.5 94 64.9
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 1.2e-35 154.1 94 64.9
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 1.5e-35 153.7 94 68.1
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 1.5e-35 153.7 93 67.7
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 2.6e-35 152.9 95 69.5
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 4.4e-35 152.1 105 63.8
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 7.5e-35 151.4 94 67.0
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 1.3e-34 150.6 96 64.6
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 2.2e-34 149.8 101 64.4
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 1.1e-33 147.5 111 57.7
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 1.4e-33 147.1 118 55.1
MD06G1074900 Malus domestica HOM05D005292 ORTHO05D006473 1.4e-33 147.1 92 67.4
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 1.2e-32 144.1 117 56.4
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 2.0e-32 143.3 94 61.7
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 3.9e-31 139.0 130 49.2
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 5.6e-30 135.2 77 70.1
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 7.3e-30 134.8 79 70.9
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 3.6e-29 132.5 78 70.5
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 6.2e-29 131.7 75 73.3
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 1.8e-28 130.2 76 75.0
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 3.1e-28 129.4 75 68.0
SEGI_14563 Sequoiadendron giganteum HOM05D000198 ORTHO05D015036 7.0e-25 118.2 65 84.6
Lsat_1_v5_gn_8_88300 Lactuca sativa HOM05D005292 ORTHO05D006473 2.5e-22 109.8 94 53.2
CDE11G1060 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 3.1e-20 102.8 60 70.0
Cc08_g13200 Coffea canephora HOM05D005292 ORTHO05D006473 4.0e-20 102.4 61 68.9
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 5.2e-20 102.1 61 68.9
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.4e-17 94.0 85 58.8
SEGI_05115 Sequoiadendron giganteum HOM05D006446 ORTHO05D007832 2.3e-15 86.7 47 85.1
Lsat_1_v5_gn_8_156781 Lactuca sativa HOM05D005292 ORTHO05D006473 2.5e-14 83.2 52 67.3
vmacro17465 Vaccinium macrocarpon HOM05D002883 ORTHO05D003116 4.7e-13 79.0 42 76.2
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 6.8e-12 75.1 105 38.1
Eucgr.C02046 Eucalyptus grandis HOM05D005292 ORTHO05D006473 3.4e-11 72.8 47 63.8
Lsat_1_v5_gn_8_99640 Lactuca sativa HOM05D005292 ORTHO05D006473 3.2e-09 66.2 39 69.2
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 1.2e-08 64.3 35 71.4


User provided reference genes

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