Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 0.0e+00 1099.7 536 100.0
SEGI_25206 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 0.0e+00 1099.7 536 100.0
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 1.2e-90 338.2 535 37.0
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 7.5e-90 335.5 544 36.6
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 1.7e-89 334.3 540 34.8
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 1.7e-81 307.8 539 33.8
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 1.7e-81 307.8 542 34.5
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 2.2e-81 307.4 538 33.5
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 8.3e-81 305.4 542 34.1
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 2.4e-80 303.9 537 33.3
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 2.4e-80 303.9 535 32.7
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 7.1e-80 302.4 535 34.8
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 2.7e-79 300.4 535 34.6
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 3.5e-79 300.1 546 33.5
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 6.0e-79 299.3 541 33.3
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 1.0e-78 298.5 540 34.3
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 8.6e-78 295.4 537 33.7
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 1.1e-77 295.0 537 32.4
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 1.9e-77 294.3 537 33.3
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 3.3e-77 293.5 535 32.5
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 9.5e-77 292.0 539 34.5
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 9.5e-77 292.0 537 33.1
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 1.2e-76 291.6 544 33.8
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 3.6e-76 290.0 537 33.1
Mapoly0075s0039 Marchantia polymorpha HOM05D006083 ORTHO05D007634 8.1e-76 288.9 554 33.4
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.1e-75 288.5 538 33.1
Ca_29789_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.1e-75 288.5 538 33.1
RcHm_v2.0_Chr1g0366211 Rosa chinensis HOM05D006083 ORTHO05D007634 1.4e-75 288.1 536 33.6
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 2.4e-75 287.3 535 32.1
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 2.4e-75 287.3 535 32.0
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 3.1e-75 287.0 536 31.9
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 6.8e-75 285.8 541 31.4
Cpa.g.sc1.374 Carica papaya HOM05D006083 ORTHO05D007634 9.9e-74 282.0 535 32.1
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 1.3e-73 281.6 532 34.0
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 1.7e-73 281.2 537 32.4
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 1.7e-73 281.2 537 32.4
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 1.7e-73 281.2 537 32.2
Phvul.008G013732 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 2.2e-73 280.8 538 32.5
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 6.4e-73 279.3 535 30.7
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 6.4e-73 279.3 539 33.2
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 8.4e-73 278.9 542 30.4
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 8.4e-73 278.9 542 33.4
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 1.1e-72 278.5 536 31.2
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 2.4e-72 277.3 542 31.7
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 3.2e-72 276.9 542 33.2
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.1e-72 276.6 537 32.4
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 5.4e-72 276.2 538 31.6
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 7.1e-72 275.8 539 31.9
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 9.2e-72 275.4 539 31.5
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 9.2e-72 275.4 536 31.5
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 2.1e-71 274.2 537 32.0
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 3.5e-71 273.5 535 32.0
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 3.5e-71 273.5 535 31.2
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 6.0e-71 272.7 548 30.8
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 1.0e-70 271.9 544 33.3
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.0e-70 271.9 537 31.8
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 1.3e-70 271.6 539 32.8
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 1.3e-70 271.6 543 32.0
AagrBONN_evm.TU.Sc2ySwM_228.2795 Anthoceros agrestis HOM05D000140 ORTHO05D007634 3.0e-70 270.4 547 33.8
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 3.0e-70 270.4 539 31.9
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 5.1e-70 269.6 536 31.5
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 1.9e-69 267.7 537 30.2
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 5.6e-69 266.2 538 30.9
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 7.3e-69 265.8 538 32.7
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 7.3e-69 265.8 550 30.7
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 3.6e-68 263.5 536 31.5
CANSAT56G0880 Cannabis sativa HOM05D006083 ORTHO05D007634 4.7e-68 263.1 540 30.7
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 4.7e-68 263.1 540 30.7
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 1.1e-67 261.9 545 31.9
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 1.4e-67 261.5 541 32.2
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 1.8e-67 261.2 539 31.5
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 2.4e-67 260.8 536 31.5
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 6.9e-67 259.2 549 31.9
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 1.5e-66 258.1 536 31.3
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 4.4e-66 256.5 536 29.7
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 7.6e-66 255.8 542 31.7
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 4.6e-63 246.5 538 31.8
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 1.0e-62 245.4 538 30.1
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 1.7e-62 244.6 539 32.3
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 2.3e-62 244.2 537 30.7
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 3.0e-62 243.8 539 31.9
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 3.0e-62 243.8 539 31.2
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 8.7e-62 242.3 539 31.5
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 1.1e-61 241.9 544 32.0
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 4.3e-61 240.0 538 30.7
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 9.6e-61 238.8 538 31.2
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 4.8e-60 236.5 538 31.2
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 1.1e-59 235.3 538 30.5
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 1.4e-59 235.0 538 29.9
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 1.8e-59 234.6 535 29.7
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 5.3e-59 233.0 539 29.9
SMO367G1201 Selaginella moellendorffii HOM05D006083 ORTHO05D007634 3.4e-58 230.3 532 32.0
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 4.2e-56 223.4 549 30.6
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 3.5e-55 220.3 540 29.6
FAN10G2882 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.1e-53 215.3 364 34.1
TAR369G0895 Trochodendron aralioides HOM05D006083 ORTHO05D007634 9.9e-50 202.2 437 30.7
Os12g0566500 Oryza sativa ssp. japonica HOM05D006083 ORTHO05D007634 4.9e-49 199.9 379 31.9
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 9.3e-48 195.7 433 30.7
Pp3c6_12750 Physcomitrium patens HOM05D006083 ORTHO05D007634 1.5e-45 188.3 538 27.0
HPP92_018996 Vanilla planifolia HOM05D006083 ORTHO05D007634 9.0e-43 179.1 393 29.3
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 8.4e-41 172.6 544 26.3
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 3.0e-30 137.5 273 31.1
Peaxi162Scf00060g00126 Petunia axillaris HOM05D006083 ORTHO05D007634 3.3e-29 134.0 268 32.5
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 5.7e-21 106.7 133 41.4
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 6.3e-12 76.6 179 29.6
Actinidia07719 Actinidia chinensis HOM05D001446 ORTHO05D001360 2.4e-11 74.7 169 28.4
Glyma.02G093802 Glycine max HOM05D006083 ORTHO05D007634 1.7e-09 68.6 132 31.1
Ca_07226_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.4e-06 58.9 63 38.1


User provided reference genes

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