Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25194 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1954.5 952 100.0
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1936.0 951 99.2
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1913.7 951 98.2
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1903.3 951 97.5
SEGI_30045 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1236.1 625 98.4
SEGI_08978 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 0.0e+00 1117.1 601 93.2
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.9e-311 1070.8 683 79.9
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.9e-311 1070.8 683 79.9
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.1e-300 1035.8 744 68.8
SEGI_39080 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.7e-290 1001.1 512 97.3
SEGI_01018 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-239 833.6 512 79.9
SEGI_28448 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.4e-217 758.4 601 68.4
SEGI_34953 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-215 753.8 512 73.6
SEGI_13303 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.2e-211 738.8 500 71.2
SEGI_00994 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.9e-209 733.0 554 65.9
SEGI_11933 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 3.2e-208 729.6 500 71.0
SEGI_24051 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-206 724.2 500 72.2
SEGI_14024 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-204 715.7 369 96.5
SEGI_04345 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.4e-181 638.6 421 72.0
SEGI_00547 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.3e-147 526.2 324 79.3
SEGI_19415 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.8e-142 511.1 422 63.3
SEGI_05518 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.5e-128 464.9 343 72.0
SEGI_10716 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.6e-119 433.7 266 78.2
SEGI_11766 Sequoiadendron giganteum HOM05D007936 ORTHO05D009941 1.4e-118 431.8 533 42.6
SEGI_39857 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.6e-103 380.6 291 70.8
SEGI_12977 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.4e-100 369.8 603 41.8
SEGI_01179 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.4e-85 320.5 204 77.0
SEGI_21011 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.8e-84 317.4 197 80.2
SEGI_27237 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-71 275.8 219 62.1
SEGI_24191 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.8e-70 271.9 189 73.5
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.0e-70 269.6 161 82.0
PSO541G2104 Papaver somniferum HOM05D007914 ORTHO05D023061 1.9e-67 261.9 784 30.1
SEGI_11812 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.1e-66 258.5 155 82.6
SEGI_25095 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.2e-63 246.5 384 38.8
SEGI_27643 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 3.1e-62 244.6 334 41.3
SEGI_29989 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-60 239.6 272 46.7
SEGI_23982 Sequoiadendron giganteum HOM05D000824 ORTHO05D010437 3.8e-60 237.7 256 47.3
SEGI_22032 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.2e-59 234.6 132 88.6
SEGI_17357 Sequoiadendron giganteum HOM05D000824 ORTHO05D006902 2.7e-58 231.5 304 44.4
SEGI_34998 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 6.3e-55 220.3 238 46.6
PSO509G0006 Papaver somniferum HOM05D007914 ORTHO05D023061 1.5e-48 199.1 314 39.2
SEGI_26297 Sequoiadendron giganteum HOM05D007914 ORTHO05D010437 2.2e-47 195.3 214 44.4
PSO675G0998 Papaver somniferum HOM05D007914 ORTHO05D023061 2.6e-45 188.3 576 28.3
PSO017G5635 Papaver somniferum HOM05D007914 ORTHO05D006902 1.7e-44 185.7 508 29.7
SEGI_07585 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-43 183.0 202 47.5
SEGI_00079 Sequoiadendron giganteum HOM05D000773 ORTHO05D000588 2.3e-41 175.3 204 45.6
SEGI_40132 Sequoiadendron giganteum HOM05D007914 ORTHO05D010437 4.5e-37 161.0 201 36.8
SEGI_04423 Sequoiadendron giganteum HOM05D000090 ORTHO05D000658 1.0e-36 159.8 176 40.9
SEGI_19677 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-36 159.8 124 66.1
SEGI_09759 Sequoiadendron giganteum HOM05D007914 ORTHO05D010437 2.7e-34 151.8 136 47.1
PSO384G4122 Papaver somniferum HOM05D007914 ORTHO05D006902 4.0e-33 147.9 382 30.1
SEGI_11783 Sequoiadendron giganteum HOM05D000824 ORTHO05D002221 4.1e-30 137.9 151 42.4
SEGI_08534 Sequoiadendron giganteum HOM05D000026 ORTHO05D000094 9.1e-30 136.7 201 39.8
SEGI_20401 Sequoiadendron giganteum HOM05D000022 ORTHO05D002153 4.5e-29 134.4 135 41.5
SEGI_17597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.5e-28 130.6 145 49.0
SEGI_28544 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.2e-27 128.3 163 43.6
SEGI_29479 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.2e-27 127.1 205 39.5
SEGI_21560 Sequoiadendron giganteum HOM05D003801 ORTHO05D010437 9.4e-27 126.7 118 48.3
PSO604G0001 Papaver somniferum HOM05D007914 ORTHO05D023061 1.6e-26 125.9 430 28.4
PSO675G2703 Papaver somniferum HOM05D007914 ORTHO05D006902 5.7e-24 117.5 226 34.5
Cre09.g417400 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 2.0e-21 109.0 354 26.6
Cre32.g758797 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 2.7e-21 108.6 369 26.0
Cre02.g142987 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.5e-19 102.8 369 26.6
Cre45.g760847 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.5e-19 102.8 369 26.6
SEGI_40659 Sequoiadendron giganteum HOM05D000044 ORTHO05D006634 5.5e-19 100.9 98 54.1
SEGI_26730 Sequoiadendron giganteum HOM05D000824 ORTHO05D384554 8.0e-18 97.1 82 51.2
SEGI_27914 Sequoiadendron giganteum HOM05D000018 ORTHO05D000187 4.0e-17 94.7 75 61.3
PSO339G4883 Papaver somniferum HOM05D007914 ORTHO05D006902 5.2e-17 94.4 153 39.2
Lalb_Chr20g0114131 Lupinus albus HOM05D008038 ORTHO05D006902 1.5e-16 92.8 296 29.4
SEGI_23601 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 2.6e-16 92.0 484 22.9
Lj6g0005294 Lotus japonicus HOM05D008038 ORTHO05D006902 4.9e-15 87.8 300 27.0
SEGI_08943 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 6.3e-15 87.4 81 51.9
TAR375G0666 Trochodendron aralioides HOM05D008038 ORTHO05D006902 8.3e-15 87.0 303 27.1
Prupe.3G170200 Prunus persica HOM05D008038 ORTHO05D006902 1.1e-14 86.7 299 27.4
PGR142G1605 Punica granatum HOM05D008038 ORTHO05D006902 1.4e-14 86.3 301 28.6
SEGI_11932 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-14 86.3 93 43.0
SEGI_21133 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 1.8e-14 85.9 302 28.8
Hund18510 Selenicereus undatus HOM05D008038 ORTHO05D006902 2.4e-14 85.5 307 26.7
Sopen07g029260 Solanum pennellii HOM05D008038 ORTHO05D006902 3.1e-14 85.1 362 25.7
SEGI_04271 Sequoiadendron giganteum HOM05D012154 ORTHO05D006902 4.1e-14 84.7 306 28.4
SEGI_31205 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 5.4e-14 84.3 300 28.7
Actinidia11192 Actinidia chinensis HOM05D008038 ORTHO05D006902 7.0e-14 84.0 305 27.9
Dinv12711 Davidia involucrata HOM05D008038 ORTHO05D006902 9.2e-14 83.6 335 26.6
Glyma.08G310900 Glycine max HOM05D008038 ORTHO05D006902 1.2e-13 83.2 332 27.4
SEGI_08593 Sequoiadendron giganteum HOM05D000074 ORTHO05D001793 1.2e-13 83.2 99 46.5
PGSC0003DMG400017364 Solanum tuberosum HOM05D008038 ORTHO05D006902 1.2e-13 83.2 329 26.4
SEGI_22423 Sequoiadendron giganteum HOM05D010666 ORTHO05D006902 2.0e-13 82.4 202 31.7
PSO675G5731 Papaver somniferum HOM05D008038 ORTHO05D006902 2.7e-13 82.0 353 25.8
Solyc07g055900.1 Solanum lycopersicum HOM05D008038 ORTHO05D006902 2.7e-13 82.0 329 26.4
CAN.G1481.7 Capsicum annuum HOM05D008038 ORTHO05D006902 4.5e-13 81.3 325 26.8
arahy.Tifrunner.gnm1.ann1.6HAR6G Arachis hypogaea HOM05D008038 ORTHO05D006902 5.9e-13 80.9 304 28.9
Manes.02G085900 Manihot esculenta HOM05D008038 ORTHO05D006902 7.7e-13 80.5 300 29.0
PSO541G6518 Papaver somniferum HOM05D008038 ORTHO05D006902 7.7e-13 80.5 300 27.0
SGA_v2.0_scaffold46G17483 Striga asiatica HOM05D008038 ORTHO05D006902 7.7e-13 80.5 303 28.4
EL10Ac7g18043 Beta vulgaris HOM05D008038 ORTHO05D006902 1.0e-12 80.1 305 27.5
Potri.007G054500 Populus trichocarpa HOM05D008038 ORTHO05D006902 1.0e-12 80.1 315 25.4
Nitab4.5_0002737g0020 Nicotiana tabacum HOM05D008038 ORTHO05D006902 1.3e-12 79.7 329 26.1
Duzib264G0258 Durio zibethinus HOM05D008038 ORTHO05D006902 1.7e-12 79.3 325 28.0
AUR62034636 Chenopodium quinoa HOM05D008038 ORTHO05D006902 2.9e-12 78.6 302 26.2
SEGI_21247 Sequoiadendron giganteum HOM05D007914 ORTHO05D385624 3.8e-12 78.2 67 52.2
arahy.Tifrunner.gnm1.ann1.I6EGUB Arachis hypogaea HOM05D008038 ORTHO05D006902 5.0e-12 77.8 304 27.6
Ah.15g095480 Amaranthus hybridus HOM05D008038 ORTHO05D006902 1.1e-11 76.6 312 26.0
PRCOL_00003757 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 1.9e-11 75.9 306 24.5
QL08p043670 Quercus lobata HOM05D008038 ORTHO05D006902 1.9e-11 75.9 299 26.8
SEGI_00045 Sequoiadendron giganteum HOM05D012154 ORTHO05D009660 1.9e-11 75.9 152 35.5
SEGI_02882 Sequoiadendron giganteum HOM05D000824 ORTHO05D010357 1.9e-11 75.9 63 55.6
Dinv12709 Davidia involucrata HOM05D008038 ORTHO05D006902 2.5e-11 75.5 299 26.4
MSTRG.6764 Avicennia marina HOM05D008038 ORTHO05D006902 7.3e-11 73.9 315 27.9
SEGI_33240 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 7.3e-11 73.9 304 27.0
Aqoxy6G01154 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 1.2e-10 73.2 306 27.5
Mapoly0078s0037 Marchantia polymorpha HOM05D008038 ORTHO05D006902 2.8e-10 72.0 302 27.5
COL.COLO4_07289 Corchorus olitorius HOM05D008038 ORTHO05D006902 2.3e-09 68.9 316 26.9
PSO832G1585 Papaver somniferum HOM05D028686 ORTHO05D020962 2.3e-09 68.9 98 35.7
SEGI_40854 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.3e-09 68.9 154 31.8
SEGI_24815 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 5.2e-09 67.8 209 27.8
Aqoxy6G01155 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 6.8e-09 67.4 307 26.4
COL.COLO4_25756 Corchorus olitorius HOM05D008038 ORTHO05D006902 6.8e-09 67.4 344 26.2
COL.COLO4_33719 Corchorus olitorius HOM05D008038 ORTHO05D006902 6.8e-09 67.4 308 26.9
SEGI_07582 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 6.8e-09 67.4 578 22.7
SEGI_11065 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.5e-08 66.2 103 39.8
CSS0017995 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 7.5e-08 63.9 222 28.4
CSS0020213 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 9.8e-08 63.5 222 28.4
AUR62036633 Chenopodium quinoa HOM05D008038 ORTHO05D006902 1.3e-07 63.2 303 26.1
Nn1g09359 Nelumbo nucifera HOM05D008038 ORTHO05D006902 1.3e-07 63.2 297 24.6
SEGI_34863 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.2e-07 62.4 54 61.1
CSS0010483 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 2.9e-07 62.0 234 28.6
CSS0040725 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 2.9e-07 62.0 234 28.6
CSS0009770 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 3.7e-07 61.6 228 27.6
CSS0027111 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 3.7e-07 61.6 222 27.9
CSS0045190 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 3.7e-07 61.6 222 27.9
Nn1g09358 Nelumbo nucifera HOM05D008038 ORTHO05D006902 6.4e-07 60.8 303 25.1
PSO478G1033 Papaver somniferum HOM05D028686 ORTHO05D020962 6.4e-07 60.8 89 37.1
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 6.4e-07 60.8 219 25.1
SEGI_27597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 8.3e-07 60.5 67 43.3
CSS0013974 Camellia sinensis var. sinensis HOM05D000096 ORTHO05D000045 1.1e-06 60.1 222 27.5
CAN.G1481.4 Capsicum annuum HOM05D008038 ORTHO05D006902 1.1e-06 60.1 263 24.3
Rhsim07G0256200 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.4e-06 59.7 222 28.4
SEGI_18427 Sequoiadendron giganteum HOM05D002791 ORTHO05D003067 3.2e-06 58.5 73 34.2
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 5.4e-06 57.8 214 29.0
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 9.2e-06 57.0 213 27.7
SEGI_09296 Sequoiadendron giganteum HOM05D010666 ORTHO05D013100 9.2e-06 57.0 109 35.8
SEGI_13237 Sequoiadendron giganteum HOM05D007914 ORTHO05D000923 9.2e-06 57.0 66 34.8


User provided reference genes

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