Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 2.5e-147 525.4 264 100.0
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 3.0e-55 219.5 156 66.0
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 5.6e-54 215.3 156 64.7
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 7.3e-54 214.9 156 66.0
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 2.8e-53 213.0 156 65.4
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 1.4e-52 210.7 156 66.0
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 1.8e-52 210.3 156 66.0
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 1.8e-52 210.3 158 64.6
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 2.3e-52 209.9 158 64.6
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 2.3e-52 209.9 158 64.6
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 3.1e-52 209.5 156 66.0
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 4.0e-52 209.1 156 65.4
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 6.8e-52 208.4 156 62.2
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 2.0e-51 206.8 156 64.1
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 4.4e-51 205.7 192 56.2
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 4.4e-51 205.7 158 63.3
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 5.8e-51 205.3 155 63.9
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 1.7e-50 203.8 155 64.5
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.2e-50 203.4 155 63.9
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 4.9e-50 202.2 156 61.5
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 4.9e-50 202.2 158 63.9
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 6.4e-50 201.8 157 60.5
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 6.4e-50 201.8 200 53.5
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 1.1e-49 201.1 150 64.0
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 1.9e-49 200.3 175 58.3
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 1.9e-49 200.3 174 55.7
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 2.4e-49 199.9 156 65.4
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 2.4e-49 199.9 158 60.8
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 3.2e-49 199.5 177 56.5
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 3.2e-49 199.5 157 61.1
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 3.2e-49 199.5 158 61.4
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 3.2e-49 199.5 156 63.5
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 7.1e-49 198.4 155 61.9
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 9.2e-49 198.0 158 62.7
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 9.2e-49 198.0 156 62.8
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 1.6e-48 197.2 156 61.5
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 2.1e-48 196.8 163 60.1
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 2.1e-48 196.8 158 62.0
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 2.7e-48 196.4 158 61.4
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 2.7e-48 196.4 156 59.6
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 3.5e-48 196.1 158 61.4
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 3.5e-48 196.1 158 55.1
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 4.6e-48 195.7 157 61.1
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 7.8e-48 194.9 156 59.6
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 1.3e-47 194.1 158 62.0
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 1.7e-47 193.7 158 58.2
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 3.9e-47 192.6 157 61.1
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 3.9e-47 192.6 156 60.9
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 5.1e-47 192.2 156 60.9
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 6.6e-47 191.8 156 60.9
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 1.1e-46 191.0 172 55.8
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 1.1e-46 191.0 156 60.9
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 1.5e-46 190.7 156 61.5
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 1.5e-46 190.7 156 57.7
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 1.5e-46 190.7 156 57.7
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 1.5e-46 190.7 156 62.2
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 1.5e-46 190.7 163 60.1
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.9e-46 190.3 157 61.1
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 2.5e-46 189.9 156 61.5
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.5e-46 189.9 157 60.5
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 3.3e-46 189.5 156 61.5
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 3.3e-46 189.5 158 58.9
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 4.3e-46 189.1 156 60.3
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.2e-45 187.6 156 59.6
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 1.2e-45 187.6 156 59.6
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.2e-45 187.6 171 56.1
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.6e-45 187.2 171 55.6
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 2.1e-45 186.8 174 55.7
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 2.1e-45 186.8 158 60.1
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 3.6e-45 186.0 156 61.5
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 6.2e-45 185.3 156 60.9
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 6.2e-45 185.3 157 59.2
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 1.1e-44 184.5 156 60.3
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 3.1e-44 183.0 171 55.6
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 4.0e-44 182.6 189 51.3
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 6.8e-44 181.8 171 55.6
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 6.8e-44 181.8 176 54.0
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 1.2e-43 181.0 131 68.7
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 2.0e-43 180.3 182 50.5
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 1.3e-42 177.6 198 50.5
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 2.2e-42 176.8 156 59.0
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 3.8e-42 176.0 156 51.9
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 2.4e-41 173.3 157 55.4
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 5.4e-41 172.2 222 44.6
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 1.2e-40 171.0 134 61.9
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 7.8e-40 168.3 131 63.4
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 3.0e-39 166.4 131 63.4
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 5.1e-39 165.6 156 53.8
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 1.9e-38 163.7 179 45.3
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 9.6e-38 161.4 159 51.6
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 1.4e-36 157.5 163 51.5
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 2.4e-36 156.8 166 49.4
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 9.0e-36 154.8 171 49.7
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 4.2e-33 146.0 149 51.7
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 8.7e-31 138.3 189 40.7
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 1.3e-29 134.4 158 48.1
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 3.1e-28 129.8 124 54.8
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 1.5e-27 127.5 155 44.5
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 2.6e-27 126.7 102 63.7
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 2.9e-26 123.2 153 47.7
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 5.5e-25 119.0 212 38.2
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 9.3e-25 118.2 225 37.3
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 1.4e-20 104.4 140 41.4
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 4.0e-20 102.8 200 36.5
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 1.7e-18 97.4 136 43.4
MCO14G439 Micromonas commoda HOM05D004613 ORTHO05D006095 4.9e-18 95.9 158 34.2
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 8.4e-18 95.1 113 51.3
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 2.3e-15 87.0 113 46.9
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 1.6e-13 80.9 76 51.3
HanXRQChr13g0397031 Helianthus annuus HOM05D004613 ORTHO05D006095 4.8e-13 79.3 114 45.6
A09p05250 Brassica napus HOM05D004613 ORTHO05D006095 4.2e-09 66.2 51 68.6
C09p05710 Brassica napus HOM05D004613 ORTHO05D006095 8.7e-07 58.5 50 56.0


User provided reference genes

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