Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25111 Sequoiadendron giganteum HOM05D003493 ORTHO05D003980 0.0e+00 1460.3 733 100.0
ATR0124G004 Amborella trichopoda HOM05D003493 ORTHO05D003980 8.2e-87 325.9 433 45.7
Aqoxy3G04358 Aquilegia oxysepala HOM05D003493 ORTHO05D003980 4.6e-82 310.1 414 44.9
TAR622G0755 Trochodendron aralioides HOM05D003493 ORTHO05D003980 7.9e-82 309.3 432 44.7
SEGI_02376 Sequoiadendron giganteum HOM05D006206 ORTHO05D007524 9.0e-78 295.8 197 76.1
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla HOM05D003493 ORTHO05D003980 3.4e-77 293.9 421 44.2
MBI06_g37980_MAGBIO Magnolia biondii HOM05D003493 ORTHO05D003980 6.5e-76 289.7 463 40.6
PSO063G3260 Papaver somniferum HOM05D003493 ORTHO05D003980 3.2e-75 287.3 423 42.6
Prupe.5G246400 Prunus persica HOM05D003493 ORTHO05D003980 4.2e-75 287.0 435 41.4
PSO782G2561 Papaver somniferum HOM05D003493 ORTHO05D003980 9.4e-75 285.8 427 42.2
Actinidia06838 Actinidia chinensis HOM05D003493 ORTHO05D003980 2.7e-74 284.3 434 43.8
CSS0005530 Camellia sinensis var. sinensis HOM05D003493 ORTHO05D003980 8.8e-73 279.3 431 43.9
CAN.G861.8 Capsicum annuum HOM05D003493 ORTHO05D003980 8.8e-73 279.3 457 39.4
Atru.chr9.57 Acer truncatum HOM05D003493 ORTHO05D003980 1.9e-72 278.1 439 40.8
QL10p035454 Quercus lobata HOM05D003493 ORTHO05D003980 1.9e-72 278.1 456 40.4
GSVIVG01024229001 Vitis vinifera HOM05D003493 ORTHO05D003980 2.5e-72 277.7 428 42.1
Nitab4.5_0000854g0120 Nicotiana tabacum HOM05D003493 ORTHO05D003980 3.3e-72 277.3 381 43.0
QL10p036794 Quercus lobata HOM05D003493 ORTHO05D003980 7.4e-72 276.2 456 40.4
Manes.02G118200 Manihot esculenta HOM05D003493 ORTHO05D003980 9.7e-72 275.8 455 39.8
MD14G1000100 Malus domestica HOM05D003493 ORTHO05D003980 1.3e-71 275.4 462 39.8
Potri.017G155000 Populus trichocarpa HOM05D003493 ORTHO05D003980 1.3e-71 275.4 442 42.5
Haze_18391 Corylus avellana HOM05D003493 ORTHO05D003980 2.2e-71 274.6 429 41.5
Migut.O00291 Erythranthe guttata HOM05D003493 ORTHO05D003980 2.8e-71 274.2 457 37.0
RcHm_v2.0_Chr7g0176841 Rosa chinensis HOM05D003493 ORTHO05D003980 2.8e-71 274.2 428 40.9
CiPaw.16G076700 Carya illinoinensis HOM05D003493 ORTHO05D003980 4.8e-71 273.5 397 42.6
FvH4_5g18670 Fragaria vesca HOM05D003493 ORTHO05D003980 6.3e-71 273.1 463 38.0
FAN18G2761 Fragaria x ananassa HOM05D003493 ORTHO05D003980 1.1e-70 272.3 463 38.0
Manes.01G159600 Manihot esculenta HOM05D003493 ORTHO05D003980 1.4e-70 271.9 454 39.6
Eucgr.H00671 Eucalyptus grandis HOM05D003493 ORTHO05D003980 2.4e-70 271.2 479 37.6
FAN13G0815 Fragaria x ananassa HOM05D003493 ORTHO05D003980 2.4e-70 271.2 467 38.3
Sed0011518 Sechium edule HOM05D003493 ORTHO05D003980 2.4e-70 271.2 389 41.6
Solyc06g072110.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 3.1e-70 270.8 435 40.0
TWI81G0199 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 3.1e-70 270.8 439 40.3
CAN.G65.58 Capsicum annuum HOM05D003493 ORTHO05D003980 4.1e-70 270.4 434 40.6
Cfa017818 Carpinus fangiana HOM05D003493 ORTHO05D003980 4.1e-70 270.4 422 41.5
Sopen06g028400 Solanum pennellii HOM05D003493 ORTHO05D003980 5.3e-70 270.0 435 40.0
FAN08G2984 Fragaria x ananassa HOM05D003493 ORTHO05D003980 6.9e-70 269.6 464 37.5
Sabra17G0126700 Salix brachista HOM05D003493 ORTHO05D003980 6.9e-70 269.6 457 42.0
THA.LOC104812198 Tarenaya hassleriana HOM05D003493 ORTHO05D003980 9.1e-70 269.2 464 39.2
vmacro17772 Vaccinium macrocarpon HOM05D003493 ORTHO05D003980 9.1e-70 269.2 442 42.1
Lj5A169T97 Lonicera japonica HOM05D003493 ORTHO05D003980 1.2e-69 268.9 414 42.0
Oeu034417.1 Olea europaea HOM05D003493 ORTHO05D003980 3.4e-69 267.3 467 40.7
FAN04G2252 Fragaria x ananassa HOM05D003493 ORTHO05D003980 4.5e-69 266.9 431 38.7
PGR083G2526 Punica granatum HOM05D003493 ORTHO05D003980 1.3e-68 265.4 435 37.9
Solyc03g019770.4 Solanum lycopersicum HOM05D003493 ORTHO05D003980 2.9e-68 264.2 472 37.5
Sopen03g029860 Solanum pennellii HOM05D003493 ORTHO05D003980 2.9e-68 264.2 472 37.7
SGA_v2.0_scaffold25G10715 Striga asiatica HOM05D003493 ORTHO05D003980 2.9e-68 264.2 462 37.9
CANSAT80G2441 Cannabis sativa HOM05D003493 ORTHO05D003980 5.0e-68 263.5 435 39.3
ClCG01G014650 Citrullus lanatus HOM05D003493 ORTHO05D003980 8.5e-68 262.7 458 38.6
Nitab4.5_0004170g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 1.1e-67 262.3 458 38.6
Gohir.D06G188200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 1.4e-67 261.9 401 40.6
Gorai.010G220600 Gossypium raimondii HOM05D003493 ORTHO05D003980 1.4e-67 261.9 401 40.6
TWI36G1567 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 1.4e-67 261.9 434 39.6
Gohir.A06G181400 Gossypium hirsutum HOM05D003493 ORTHO05D003980 4.2e-67 260.4 401 40.6
SalBow5G1620 Salvia bowleyana HOM05D003493 ORTHO05D003980 4.2e-67 260.4 469 38.0
Oeu063704.1 Olea europaea HOM05D003493 ORTHO05D003980 5.5e-67 260.0 425 40.0
Lalb_Chr14g0370061 Lupinus albus HOM05D003493 ORTHO05D003980 9.4e-67 259.2 432 41.0
MSTRG.23219 Avicennia marina HOM05D003493 ORTHO05D003980 1.2e-66 258.8 472 38.3
CsaV3_1G007680 Cucumis sativus L. HOM05D003493 ORTHO05D003980 2.1e-66 258.1 426 40.1
Nitab4.5_0000477g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 2.1e-66 258.1 430 38.8
MELO3C002186.2 Cucumis melo HOM05D003493 ORTHO05D003980 2.7e-66 257.7 425 40.5
Gohir.D05G112200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 2.7e-66 257.7 419 38.7
Thhalv10018153m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 3.6e-66 257.3 411 39.2
Gorai.009G116400 Gossypium raimondii HOM05D003493 ORTHO05D003980 4.7e-66 256.9 418 38.5
Sp5g28170 Schrenkiella parvula HOM05D003493 ORTHO05D003980 4.7e-66 256.9 435 38.9
Gohir.A05G111700 Gossypium hirsutum HOM05D003493 ORTHO05D003980 6.1e-66 256.5 415 38.6
Nitab4.5_0003367g0050 Nicotiana tabacum HOM05D003493 ORTHO05D003980 7.9e-66 256.1 411 39.9
Ca_25303_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 2.3e-65 254.6 432 40.0
Thecc.06G006900 Theobroma cacao HOM05D003493 ORTHO05D003980 2.3e-65 254.6 404 39.6
Duzib192G0928 Durio zibethinus HOM05D003493 ORTHO05D003980 1.1e-64 252.3 407 39.6
Dinv11742 Davidia involucrata HOM05D003493 ORTHO05D003980 2.0e-64 251.5 491 38.9
ECA232G4824 Erigeron canadensis HOM05D003493 ORTHO05D003980 2.0e-64 251.5 410 40.7
Lsat_1_v5_gn_0_10721 Lactuca sativa HOM05D003493 ORTHO05D003980 4.4e-64 250.4 422 40.3
Lj9A410T67 Lonicera japonica HOM05D003493 ORTHO05D003980 4.4e-64 250.4 390 42.1
Lj2g0009881 Lotus japonicus HOM05D003493 ORTHO05D003980 5.7e-64 250.0 482 35.9
Medtr6g066300 Medicago truncatula HOM05D003493 ORTHO05D003980 7.4e-64 249.6 442 39.6
Duzib235G1490 Durio zibethinus HOM05D003493 ORTHO05D003980 9.7e-64 249.2 408 40.2
Lalb_Chr06g0168711 Lupinus albus HOM05D003493 ORTHO05D003980 1.7e-63 248.4 394 40.9
Sp1g15900 Schrenkiella parvula HOM05D003493 ORTHO05D003980 1.7e-63 248.4 425 38.4
Phvul.004G135600 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 2.2e-63 248.1 389 40.9
VMungo0464G0665 Vigna mungo HOM05D003493 ORTHO05D003980 2.8e-63 247.7 395 41.5
Peaxi162Scf00643g00431 Petunia axillaris HOM05D003493 ORTHO05D003980 3.7e-63 247.3 376 41.5
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea HOM05D003493 ORTHO05D003980 4.8e-63 246.9 423 36.6
Lalb_Chr21g0311711 Lupinus albus HOM05D003493 ORTHO05D003980 8.2e-63 246.1 432 37.7
TPR.G8860 Trifolium pratense HOM05D003493 ORTHO05D003980 8.2e-63 246.1 425 38.8
Glyma.09G160200 Glycine max HOM05D003493 ORTHO05D003980 1.1e-62 245.7 417 40.8
BolC6t39773H Brassica oleracea HOM05D003493 ORTHO05D003980 1.8e-62 245.0 407 39.1
Glyma.16G209600 Glycine max HOM05D003493 ORTHO05D003980 1.8e-62 245.0 430 38.8
Nn3g18516 Nelumbo nucifera HOM05D003493 ORTHO05D003980 1.8e-62 245.0 372 42.2
Thhalv10006829m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 2.4e-62 244.6 407 38.8
Psat1g117720 Pisum sativum HOM05D003493 ORTHO05D003980 4.1e-62 243.8 501 36.9
Zm00001eb190790 Zea mays HOM05D003493 ORTHO05D003980 4.1e-62 243.8 469 36.9
C06p47340 Brassica napus HOM05D003493 ORTHO05D003980 9.1e-62 242.7 407 38.8
BolC2t09128H Brassica oleracea HOM05D003493 ORTHO05D003980 9.1e-62 242.7 464 37.1
Carub.0001s1755 Capsella rubella HOM05D003493 ORTHO05D003980 9.1e-62 242.7 438 36.5
A02p18540 Brassica napus HOM05D003493 ORTHO05D003980 1.2e-61 242.3 463 36.9
AL2G32970 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 2.6e-61 241.1 412 38.3
BraA02t06893Z Brassica rapa HOM05D003493 ORTHO05D003980 2.6e-61 241.1 464 36.9
HanXRQChr08g0220881 Helianthus annuus HOM05D003493 ORTHO05D003980 2.6e-61 241.1 457 36.5
Medtr1g077470 Medicago truncatula HOM05D003493 ORTHO05D003980 2.6e-61 241.1 438 38.6
Sc12g0007780 Simmondsia chinensis HOM05D003493 ORTHO05D003980 2.6e-61 241.1 415 38.6
Aa31LG7G2640 Aethionema arabicum HOM05D003493 ORTHO05D003980 3.4e-61 240.7 445 36.0
BraA07t31464Z Brassica rapa HOM05D003493 ORTHO05D003980 3.4e-61 240.7 407 38.6
Peaxi162Scf01390g00035 Petunia axillaris HOM05D003493 ORTHO05D003980 3.4e-61 240.7 443 37.5
Psat6g054360 Pisum sativum HOM05D003493 ORTHO05D003980 3.4e-61 240.7 435 38.6
VMungo0720G0805 Vigna mungo HOM05D003493 ORTHO05D003980 3.4e-61 240.7 432 36.8
C02p30730 Brassica napus HOM05D003493 ORTHO05D003980 7.7e-61 239.6 464 36.6
CARHR018430 Cardamine hirsuta HOM05D003493 ORTHO05D003980 1.0e-60 239.2 469 36.2
Carub.0002s1999 Capsella rubella HOM05D003493 ORTHO05D003980 1.3e-60 238.8 459 37.3
BraA09t41388Z Brassica rapa HOM05D003493 ORTHO05D003980 1.7e-60 238.4 423 36.9
Lj5g0000329 Lotus japonicus HOM05D003493 ORTHO05D003980 1.7e-60 238.4 434 38.5
A09p60190 Brassica napus HOM05D003493 ORTHO05D003980 2.2e-60 238.0 421 36.3
BraA06t24529Z Brassica rapa HOM05D003493 ORTHO05D003980 2.2e-60 238.0 464 36.0
AL1G30180 Arabidopsis lyrata HOM05D003493 ORTHO05D003980 2.9e-60 237.7 441 37.0
A07p39150 Brassica napus HOM05D003493 ORTHO05D003980 2.9e-60 237.7 407 38.1
C08p43630 Brassica napus HOM05D003493 ORTHO05D003980 2.9e-60 237.7 431 36.9
BolC8t51909H Brassica oleracea HOM05D003493 ORTHO05D003980 2.9e-60 237.7 431 36.9
TPR.G8876 Trifolium pratense HOM05D003493 ORTHO05D003980 2.9e-60 237.7 431 37.8
BolC5t30322H Brassica oleracea HOM05D003493 ORTHO05D003980 3.8e-60 237.3 463 36.3
Glyma.10G174700 Glycine max HOM05D003493 ORTHO05D003980 5.0e-60 236.9 431 36.4
AT1G73200 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 1.1e-59 235.7 412 38.1
BcaB07g34006 Brassica carinata HOM05D003493 ORTHO05D003980 1.4e-59 235.3 470 36.0
A06p13880 Brassica napus HOM05D003493 ORTHO05D003980 1.4e-59 235.3 437 36.4
CDE07G1702 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 1.4e-59 235.3 429 36.1
CDE04G1302 Ceratophyllum demersum HOM05D003493 ORTHO05D003980 1.9e-59 235.0 429 35.9
BcaC07g41354 Brassica carinata HOM05D003493 ORTHO05D003980 9.4e-59 232.6 465 35.9
CARHR066210 Cardamine hirsuta HOM05D003493 ORTHO05D003980 9.4e-59 232.6 383 38.1
DCAR_011394 Daucus carota HOM05D003493 ORTHO05D003980 1.2e-58 232.3 460 35.9
AagrBONN_evm.TU.Sc2ySwM_368.2475 Anthoceros agrestis HOM05D003493 ORTHO05D003980 2.1e-58 231.5 429 34.0
Aa31LG4G3480 Aethionema arabicum HOM05D003493 ORTHO05D003980 2.7e-58 231.1 473 34.0
HanXRQChr15g0492171 Helianthus annuus HOM05D003493 ORTHO05D003980 4.7e-58 230.3 468 34.8
C05p16200 Brassica napus HOM05D003493 ORTHO05D003980 8.0e-58 229.6 461 35.8
AT1G17820 Arabidopsis thaliana HOM05D003493 ORTHO05D003980 1.8e-57 228.4 474 35.2
Phvul.L006701 Phaseolus vulgaris HOM05D003493 ORTHO05D003980 8.8e-57 226.1 438 35.2
Cc04_g13620 Coffea canephora HOM05D003493 ORTHO05D003980 2.0e-56 224.9 377 39.3
Ca_09923_v3 Cicer arietinum L. HOM05D003493 ORTHO05D003980 2.6e-56 224.6 406 38.7
PGSC0003DMG400015207 Solanum tuberosum HOM05D003493 ORTHO05D003980 1.3e-55 222.2 374 38.0
Zm00001eb228970 Zea mays HOM05D003493 ORTHO05D003980 4.8e-55 220.3 419 37.0
Mapoly0036s0110 Marchantia polymorpha HOM05D003493 ORTHO05D003980 2.5e-51 208.0 450 33.1
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea HOM05D003493 ORTHO05D003980 3.6e-50 204.1 475 31.6
SMO361G0167 Selaginella moellendorffii HOM05D003493 ORTHO05D003980 8.0e-50 203.0 438 32.4
arahy.Tifrunner.gnm1.ann1.W0PAIX Arachis hypogaea HOM05D003493 ORTHO05D003980 3.0e-49 201.1 440 35.9
CiPaw.15G108700 Carya illinoinensis HOM05D003493 ORTHO05D003980 5.7e-48 196.8 311 41.5
Pp3c1_25660 Physcomitrium patens HOM05D003493 ORTHO05D003980 5.9e-45 186.8 460 31.5
AUR62041605 Chenopodium quinoa HOM05D003493 ORTHO05D003980 2.2e-44 184.9 421 32.8
SEGI_39901 Sequoiadendron giganteum HOM05D003493 ORTHO05D007524 6.5e-44 183.3 155 60.6
arahy.Tifrunner.gnm1.ann1.K1F8KI Arachis hypogaea HOM05D003493 ORTHO05D003980 3.2e-43 181.0 482 32.8
Hund06742 Selenicereus undatus HOM05D003493 ORTHO05D001641 7.2e-43 179.9 409 30.6
EL10Ac8g19467 Beta vulgaris HOM05D003493 ORTHO05D003980 2.1e-42 178.3 435 32.0
Pp3c14_11980 Physcomitrium patens HOM05D003493 ORTHO05D003980 8.0e-42 176.4 468 29.9
BcaNung05482 Brassica carinata HOM05D003493 ORTHO05D003980 4.0e-41 174.1 450 32.0
Pp3c5_12280 Physcomitrium patens HOM05D003493 ORTHO05D003980 8.3e-39 166.4 463 29.2
Pp3c17_10430 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.4e-38 165.6 495 28.7
Lj9C232G5 Lonicera japonica HOM05D003493 ORTHO05D003980 2.4e-38 164.9 341 36.1
Pp3c6_14220 Physcomitrium patens HOM05D003493 ORTHO05D003980 1.1e-35 156.0 459 27.5
SEGI_27258 Sequoiadendron giganteum HOM05D003493 ORTHO05D007435 5.4e-30 137.1 163 46.6
Ciclev10019478m.g Citrus clementina HOM05D003493 ORTHO05D003980 9.2e-30 136.3 265 37.7
SEGI_29117 Sequoiadendron giganteum HOM05D002567 ORTHO05D007435 2.7e-29 134.8 122 62.3
Os02g0827500 Oryza sativa ssp. japonica HOM05D003493 ORTHO05D003980 5.0e-28 130.6 313 35.5
Potri.018G152400 Populus trichocarpa HOM05D003493 ORTHO05D003980 2.5e-27 128.3 281 34.2
arahy.Tifrunner.gnm1.ann1.28MV8S Arachis hypogaea HOM05D003493 ORTHO05D003980 4.7e-26 124.0 209 38.8
PGSC0003DMG400027062 Solanum tuberosum HOM05D003493 ORTHO05D003980 3.4e-24 117.9 281 33.1
arahy.Tifrunner.gnm1.ann1.I3UW9X Arachis hypogaea HOM05D003493 ORTHO05D003980 1.3e-23 115.9 157 42.7
arahy.Tifrunner.gnm1.ann1.Y1U1WE Arachis hypogaea HOM05D003493 ORTHO05D003980 2.9e-23 114.8 245 34.7
COL.COLO4_22900 Corchorus olitorius HOM05D003493 ORTHO05D003980 2.7e-21 108.2 142 41.5
AUR62040635 Chenopodium quinoa HOM05D003493 ORTHO05D003980 3.5e-21 107.8 339 27.4
arahy.Tifrunner.gnm1.ann1.XZC4F6 Arachis hypogaea HOM05D003493 ORTHO05D003980 1.1e-19 102.8 388 26.3
SEGI_39366 Sequoiadendron giganteum HOM05D000834 ORTHO05D000909 2.8e-18 98.2 87 63.2
SEGI_17360 Sequoiadendron giganteum HOM05D006301 ORTHO05D000646 4.7e-18 97.4 188 37.8
Gohir.A05G111401 Gossypium hirsutum HOM05D003493 ORTHO05D003980 4.0e-17 94.4 314 28.0
SEGI_29964 Sequoiadendron giganteum HOM05D000557 ORTHO05D007028 1.2e-16 92.8 91 56.0
arahy.Tifrunner.gnm1.ann1.LRB6U9 Arachis hypogaea HOM05D003493 ORTHO05D003980 1.5e-16 92.4 232 34.9
Cpa.g.c43819 Carica papaya HOM05D003493 ORTHO05D003980 2.2e-15 88.6 117 41.0
Rhsim05G0011100 Rhododendron simsii HOM05D003493 ORTHO05D003980 6.0e-13 80.5 115 37.4
Hund22361 Selenicereus undatus HOM05D003493 ORTHO05D003980 1.0e-12 79.7 123 39.0
SEGI_34041 Sequoiadendron giganteum HOM05D006301 ORTHO05D007435 1.2e-10 72.8 145 38.6
SEGI_32533 Sequoiadendron giganteum HOM05D001366 ORTHO05D003220 2.1e-10 72.0 46 76.1
SEGI_24792 Sequoiadendron giganteum HOM05D006301 ORTHO05D012121 2.8e-10 71.6 73 52.1
SEGI_02714 Sequoiadendron giganteum HOM05D003493 ORTHO05D007435 9.2e-06 56.6 50 62.0


User provided reference genes

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