Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 3.7e-48 194.5 95 100.0
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 8.6e-13 77.0 63 55.6
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.1e-12 76.6 47 72.3
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.1e-12 76.6 47 70.2
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 1.1e-12 76.6 47 72.3
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 1.1e-12 76.6 47 72.3
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 1.1e-12 76.6 46 69.6
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.5e-12 76.3 48 64.6
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 1.5e-12 76.3 62 56.5
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 4.2e-12 74.7 47 66.0
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 4.2e-12 74.7 47 70.2
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 4.2e-12 74.7 47 70.2
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 4.2e-12 74.7 46 71.7
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 4.2e-12 74.7 46 71.7
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 5.5e-12 74.3 62 54.8
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 7.2e-12 73.9 46 65.2
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 7.2e-12 73.9 47 68.1
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 7.2e-12 73.9 76 48.7
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 9.5e-12 73.6 47 68.1
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 9.5e-12 73.6 47 68.1
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 1.6e-11 72.8 64 50.0
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 1.6e-11 72.8 64 50.0
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 1.6e-11 72.8 47 66.0
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 2.1e-11 72.4 47 66.0
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 2.1e-11 72.4 46 67.4
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.8e-11 72.0 46 67.4
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.8e-11 72.0 46 67.4
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.8e-11 72.0 49 65.3
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.8e-11 72.0 49 65.3
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 2.8e-11 72.0 46 67.4
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 2.8e-11 72.0 47 63.8
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 3.6e-11 71.6 46 65.2
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 3.6e-11 71.6 46 65.2
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.6e-11 71.6 47 66.0
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 3.6e-11 71.6 47 66.0
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 4.7e-11 71.2 64 48.4
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 6.1e-11 70.9 64 48.4
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 6.1e-11 70.9 47 66.0
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 6.1e-11 70.9 47 66.0
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 6.1e-11 70.9 47 66.0
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 8.0e-11 70.5 64 48.4
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 8.0e-11 70.5 64 48.4
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 8.0e-11 70.5 49 61.2
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 8.0e-11 70.5 49 63.3
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 8.0e-11 70.5 49 63.3
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.0e-10 70.1 69 49.3
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 1.4e-10 69.7 64 46.9
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 1.4e-10 69.7 64 48.4
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 1.4e-10 69.7 64 46.9
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 1.4e-10 69.7 64 46.9
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 1.4e-10 69.7 64 48.4
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.4e-10 69.7 64 46.9
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 1.8e-10 69.3 64 48.4
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 2.3e-10 68.9 64 48.4
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 2.3e-10 68.9 64 46.9
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 3.0e-10 68.6 64 45.3
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 3.0e-10 68.6 46 65.2
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 3.0e-10 68.6 49 61.2
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 5.2e-10 67.8 64 48.4
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 5.2e-10 67.8 67 47.8
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 8.8e-10 67.0 61 45.9
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 8.8e-10 67.0 61 45.9
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 1.2e-09 66.6 64 45.3
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.2e-09 66.6 61 47.5
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 1.2e-09 66.6 64 45.3
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 1.2e-09 66.6 64 45.3
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 1.2e-09 66.6 61 47.5
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 1.5e-09 66.2 46 65.2
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 2.0e-09 65.9 48 56.2
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 3.4e-09 65.1 64 45.3
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 4.4e-09 64.7 61 49.2
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 4.4e-09 64.7 61 50.8
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 5.7e-09 64.3 48 56.2
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 7.5e-09 63.9 51 60.8
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 9.8e-09 63.5 46 63.0
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 1.3e-08 63.2 44 63.6
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 1.3e-08 63.2 64 45.3
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.7e-08 62.8 62 46.8
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.7e-08 62.8 62 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 2.8e-08 62.0 46 60.9
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 3.7e-08 61.6 45 62.2
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 4.9e-08 61.2 62 45.2
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 6.3e-08 60.8 46 56.5
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 6.3e-08 60.8 64 42.2
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 8.3e-08 60.5 64 45.3
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 1.1e-07 60.1 61 45.9
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 1.8e-07 59.3 46 54.3
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 1.8e-07 59.3 63 44.4
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 1.8e-07 59.3 69 40.6
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 2.4e-07 58.9 78 38.5
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 2.4e-07 58.9 62 45.2
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 3.1e-07 58.5 34 73.5
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 3.1e-07 58.5 46 50.0
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 4.1e-07 58.2 38 65.8
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 4.1e-07 58.2 46 54.3
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 5.4e-07 57.8 62 41.9
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 9.2e-07 57.0 71 43.7
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 9.2e-07 57.0 85 38.8
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.2e-06 56.6 57 49.1
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 1.2e-06 56.6 49 53.1
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.6e-06 56.2 56 50.0
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 2.7e-06 55.5 47 51.1
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 3.5e-06 55.1 47 51.1
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 4.5e-06 54.7 61 42.6
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 5.9e-06 54.3 46 52.2
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 5.9e-06 54.3 55 49.1


User provided reference genes

Program Settings